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Nosocomial Transmission of Extensively Drug-Resistant Tuberculosis in a Rural Hospital in South Africa
Background. Extensively drug-resistant tuberculosis (XDR-tuberculosis) is a global public health threat, but few data exist elucidating factors driving this epidemic. The initial XDR-tuberculosis report from South Africa suggested transmission is an important factor, but detailed epidemiologic and m...
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Published in: | The Journal of infectious diseases 2013-01, Vol.207 (1), p.9-17 |
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creator | Gandhi, Neel R. Weissman, Darren Moodley, Prashini Ramathal, Melissa Elson, Inga Kreiswirth, Barry N. Mathema, Barun Shashkina, Elena Rothenberg, Richard Moll, Anthony P. Friedland, Gerald Sturm, A. Willem Shah, N. Sarita |
description | Background. Extensively drug-resistant tuberculosis (XDR-tuberculosis) is a global public health threat, but few data exist elucidating factors driving this epidemic. The initial XDR-tuberculosis report from South Africa suggested transmission is an important factor, but detailed epidemiologic and molecular analyses were not available for further characterization. Methods. We performed a retrospective, observational study among XDR-tuberculosis patients to identify hospital-associated epidemiologic links. We used spoligotyping, IS6110-based restriction fragment-length polymorphism analysis, and sequencing of resistance-determining regions to identify clusters. Social network analysis was used to construct transmission networks among genotypically clustered patients. Results. Among 148 XDR-tuberculosis patients, 98% were infected with human immunodeficiency virus (HIV), and 59% had smear-positive tuberculosis. Nearly all (93%) were hospitalized while infectious with XDR-tuberculosis (median duration, 15 days; interquartile range: 10-25 days). Genotyping identified a predominant cluster comprising 96% of isolates. Epidemiologic links were identified for 82% of patients; social network analysis demonstrated multiple generations of transmission across a highly interconnected network. Conclusions. The XDR-tuberculosis epidemic in Tugela Ferry, South Africa, has been highly clonal. However, the epidemic is not the result of a point-source outbreak; rather, a high degree of interconnectedness allowed multiple generations of nosocomial transmission. Similar to the outbreaks of multidrug-resistant tuberculosis in the 1990s, poor infection control, delayed diagnosis, and a high HIV prevalence facilitated transmission. Important lessons from those outbreaks must be applied to stem further expansion of this epidemic. |
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Willem ; Shah, N. Sarita</creator><creatorcontrib>Gandhi, Neel R. ; Weissman, Darren ; Moodley, Prashini ; Ramathal, Melissa ; Elson, Inga ; Kreiswirth, Barry N. ; Mathema, Barun ; Shashkina, Elena ; Rothenberg, Richard ; Moll, Anthony P. ; Friedland, Gerald ; Sturm, A. Willem ; Shah, N. Sarita</creatorcontrib><description>Background. Extensively drug-resistant tuberculosis (XDR-tuberculosis) is a global public health threat, but few data exist elucidating factors driving this epidemic. The initial XDR-tuberculosis report from South Africa suggested transmission is an important factor, but detailed epidemiologic and molecular analyses were not available for further characterization. Methods. We performed a retrospective, observational study among XDR-tuberculosis patients to identify hospital-associated epidemiologic links. We used spoligotyping, IS6110-based restriction fragment-length polymorphism analysis, and sequencing of resistance-determining regions to identify clusters. Social network analysis was used to construct transmission networks among genotypically clustered patients. Results. Among 148 XDR-tuberculosis patients, 98% were infected with human immunodeficiency virus (HIV), and 59% had smear-positive tuberculosis. Nearly all (93%) were hospitalized while infectious with XDR-tuberculosis (median duration, 15 days; interquartile range: 10-25 days). Genotyping identified a predominant cluster comprising 96% of isolates. Epidemiologic links were identified for 82% of patients; social network analysis demonstrated multiple generations of transmission across a highly interconnected network. Conclusions. The XDR-tuberculosis epidemic in Tugela Ferry, South Africa, has been highly clonal. However, the epidemic is not the result of a point-source outbreak; rather, a high degree of interconnectedness allowed multiple generations of nosocomial transmission. Similar to the outbreaks of multidrug-resistant tuberculosis in the 1990s, poor infection control, delayed diagnosis, and a high HIV prevalence facilitated transmission. Important lessons from those outbreaks must be applied to stem further expansion of this epidemic.</description><identifier>ISSN: 0022-1899</identifier><identifier>EISSN: 1537-6613</identifier><identifier>DOI: 10.1093/infdis/jis631</identifier><identifier>PMID: 23166374</identifier><identifier>CODEN: JIDIAQ</identifier><language>eng</language><publisher>Oxford: Oxford University Press</publisher><subject>Adult ; Antitubercular Agents - therapeutic use ; BACTERIA ; Biological and medical sciences ; Cluster Analysis ; Cross Infection - complications ; Cross Infection - epidemiology ; Cross Infection - microbiology ; Cross Infection - transmission ; Data transmission ; Disease transmission ; Drug Therapy, Combination ; Epidemics ; Ethambutol - therapeutic use ; Extensively Drug-Resistant Tuberculosis - complications ; Extensively Drug-Resistant Tuberculosis - epidemiology ; Extensively Drug-Resistant Tuberculosis - microbiology ; Extensively Drug-Resistant Tuberculosis - transmission ; Female ; Ferries ; Fundamental and applied biological sciences. Psychology ; Genotype ; HIV ; HIV Infections - complications ; HIV Infections - virology ; Hospital admissions ; Hospitals, Rural ; Humans ; Infection control ; Infectious diseases ; Isoniazid - therapeutic use ; Major and Brief Reports ; Male ; Medical sciences ; Microbiology ; Multidrug resistant tuberculosis ; Mutation ; Mycobacterium tuberculosis ; Mycobacterium tuberculosis - classification ; Mycobacterium tuberculosis - genetics ; Mycobacterium tuberculosis - isolation & purification ; Polymorphism, Restriction Fragment Length ; Prevalence ; Pyrazinamide - therapeutic use ; Retrospective Studies ; Rifampin - therapeutic use ; Sequence Analysis, DNA ; South Africa - epidemiology ; Tuberculosis</subject><ispartof>The Journal of infectious diseases, 2013-01, Vol.207 (1), p.9-17</ispartof><rights>Copyright © 2013 Oxford University Press on behalf of the Infectious Diseases Society of America</rights><rights>2014 INIST-CNRS</rights><rights>The Author 2012. Published by Oxford University Press on behalf of the Infectious Diseases Society of America. All rights reserved. For Permissions, please e-mail: . 2012</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c439t-1a9cceae630b0e9ef00cc07be9b97973092f077660743c4fc3d59b962c26b11e3</citedby><cites>FETCH-LOGICAL-c439t-1a9cceae630b0e9ef00cc07be9b97973092f077660743c4fc3d59b962c26b11e3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.jstor.org/stable/pdf/41726162$$EPDF$$P50$$Gjstor$$H</linktopdf><linktohtml>$$Uhttps://www.jstor.org/stable/41726162$$EHTML$$P50$$Gjstor$$H</linktohtml><link.rule.ids>230,314,776,780,881,27903,27904,58217,58450</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=27110415$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/23166374$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Gandhi, Neel R.</creatorcontrib><creatorcontrib>Weissman, Darren</creatorcontrib><creatorcontrib>Moodley, Prashini</creatorcontrib><creatorcontrib>Ramathal, Melissa</creatorcontrib><creatorcontrib>Elson, Inga</creatorcontrib><creatorcontrib>Kreiswirth, Barry N.</creatorcontrib><creatorcontrib>Mathema, Barun</creatorcontrib><creatorcontrib>Shashkina, Elena</creatorcontrib><creatorcontrib>Rothenberg, Richard</creatorcontrib><creatorcontrib>Moll, Anthony P.</creatorcontrib><creatorcontrib>Friedland, Gerald</creatorcontrib><creatorcontrib>Sturm, A. Willem</creatorcontrib><creatorcontrib>Shah, N. Sarita</creatorcontrib><title>Nosocomial Transmission of Extensively Drug-Resistant Tuberculosis in a Rural Hospital in South Africa</title><title>The Journal of infectious diseases</title><addtitle>J Infect Dis</addtitle><description>Background. Extensively drug-resistant tuberculosis (XDR-tuberculosis) is a global public health threat, but few data exist elucidating factors driving this epidemic. The initial XDR-tuberculosis report from South Africa suggested transmission is an important factor, but detailed epidemiologic and molecular analyses were not available for further characterization. Methods. We performed a retrospective, observational study among XDR-tuberculosis patients to identify hospital-associated epidemiologic links. We used spoligotyping, IS6110-based restriction fragment-length polymorphism analysis, and sequencing of resistance-determining regions to identify clusters. Social network analysis was used to construct transmission networks among genotypically clustered patients. Results. Among 148 XDR-tuberculosis patients, 98% were infected with human immunodeficiency virus (HIV), and 59% had smear-positive tuberculosis. Nearly all (93%) were hospitalized while infectious with XDR-tuberculosis (median duration, 15 days; interquartile range: 10-25 days). Genotyping identified a predominant cluster comprising 96% of isolates. Epidemiologic links were identified for 82% of patients; social network analysis demonstrated multiple generations of transmission across a highly interconnected network. Conclusions. The XDR-tuberculosis epidemic in Tugela Ferry, South Africa, has been highly clonal. However, the epidemic is not the result of a point-source outbreak; rather, a high degree of interconnectedness allowed multiple generations of nosocomial transmission. Similar to the outbreaks of multidrug-resistant tuberculosis in the 1990s, poor infection control, delayed diagnosis, and a high HIV prevalence facilitated transmission. Important lessons from those outbreaks must be applied to stem further expansion of this epidemic.</description><subject>Adult</subject><subject>Antitubercular Agents - therapeutic use</subject><subject>BACTERIA</subject><subject>Biological and medical sciences</subject><subject>Cluster Analysis</subject><subject>Cross Infection - complications</subject><subject>Cross Infection - epidemiology</subject><subject>Cross Infection - microbiology</subject><subject>Cross Infection - transmission</subject><subject>Data transmission</subject><subject>Disease transmission</subject><subject>Drug Therapy, Combination</subject><subject>Epidemics</subject><subject>Ethambutol - therapeutic use</subject><subject>Extensively Drug-Resistant Tuberculosis - complications</subject><subject>Extensively Drug-Resistant Tuberculosis - epidemiology</subject><subject>Extensively Drug-Resistant Tuberculosis - microbiology</subject><subject>Extensively Drug-Resistant Tuberculosis - transmission</subject><subject>Female</subject><subject>Ferries</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Genotype</subject><subject>HIV</subject><subject>HIV Infections - complications</subject><subject>HIV Infections - virology</subject><subject>Hospital admissions</subject><subject>Hospitals, Rural</subject><subject>Humans</subject><subject>Infection control</subject><subject>Infectious diseases</subject><subject>Isoniazid - therapeutic use</subject><subject>Major and Brief Reports</subject><subject>Male</subject><subject>Medical sciences</subject><subject>Microbiology</subject><subject>Multidrug resistant tuberculosis</subject><subject>Mutation</subject><subject>Mycobacterium tuberculosis</subject><subject>Mycobacterium tuberculosis - classification</subject><subject>Mycobacterium tuberculosis - genetics</subject><subject>Mycobacterium tuberculosis - isolation & purification</subject><subject>Polymorphism, Restriction Fragment Length</subject><subject>Prevalence</subject><subject>Pyrazinamide - therapeutic use</subject><subject>Retrospective Studies</subject><subject>Rifampin - therapeutic use</subject><subject>Sequence Analysis, DNA</subject><subject>South Africa - epidemiology</subject><subject>Tuberculosis</subject><issn>0022-1899</issn><issn>1537-6613</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2013</creationdate><recordtype>article</recordtype><recordid>eNpVkcFvVCEQh4nR2O3q0aOGi4mXZ4F5C3IxaWprTRpN6nomPBZaNm9hZXiN_e_FvHWjJ8jMx28mfIS84uw9ZxrOYgqbiGfbiBL4E7LgK1CdlByekgVjQnT8g9Yn5BRxyxjrQarn5EQAlxJUvyDha8bs8i7aka6LTbiLiDEnmgO9_FV9wvjgx0f6qUx33a3HiNWmStfT4IubxtwKNCZq6e1UWsR1xn2s7dJq3_NU7-l5KNHZF-RZsCP6l4dzSX5cXa4vrrubb5-_XJzfdK4HXTtutXPeeglsYF77wJhzTA1eD1ppBUyLwJSSkqkeXB8cbFatJYUTcuDcw5J8nHP307DzG-dTbWuZfYk7Wx5NttH830nx3tzlBwMrAUpDC3h3CCj55-SxmvYhzo-jTT5PaLhQIKSUK9XQbkZdyYjFh-MYzswfN2Z2Y2Y3jX_z725H-q-MBrw9ABadHUPT4drzI6c4Z33zuySvZ26LNZdjv-dKSC4F_AZgq6Wg</recordid><startdate>20130101</startdate><enddate>20130101</enddate><creator>Gandhi, Neel R.</creator><creator>Weissman, Darren</creator><creator>Moodley, Prashini</creator><creator>Ramathal, Melissa</creator><creator>Elson, Inga</creator><creator>Kreiswirth, Barry N.</creator><creator>Mathema, Barun</creator><creator>Shashkina, Elena</creator><creator>Rothenberg, Richard</creator><creator>Moll, Anthony P.</creator><creator>Friedland, Gerald</creator><creator>Sturm, A. Willem</creator><creator>Shah, N. Sarita</creator><general>Oxford University Press</general><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20130101</creationdate><title>Nosocomial Transmission of Extensively Drug-Resistant Tuberculosis in a Rural Hospital in South Africa</title><author>Gandhi, Neel R. ; Weissman, Darren ; Moodley, Prashini ; Ramathal, Melissa ; Elson, Inga ; Kreiswirth, Barry N. ; Mathema, Barun ; Shashkina, Elena ; Rothenberg, Richard ; Moll, Anthony P. ; Friedland, Gerald ; Sturm, A. Willem ; Shah, N. Sarita</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c439t-1a9cceae630b0e9ef00cc07be9b97973092f077660743c4fc3d59b962c26b11e3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2013</creationdate><topic>Adult</topic><topic>Antitubercular Agents - therapeutic use</topic><topic>BACTERIA</topic><topic>Biological and medical sciences</topic><topic>Cluster Analysis</topic><topic>Cross Infection - complications</topic><topic>Cross Infection - epidemiology</topic><topic>Cross Infection - microbiology</topic><topic>Cross Infection - transmission</topic><topic>Data transmission</topic><topic>Disease transmission</topic><topic>Drug Therapy, Combination</topic><topic>Epidemics</topic><topic>Ethambutol - therapeutic use</topic><topic>Extensively Drug-Resistant Tuberculosis - complications</topic><topic>Extensively Drug-Resistant Tuberculosis - epidemiology</topic><topic>Extensively Drug-Resistant Tuberculosis - microbiology</topic><topic>Extensively Drug-Resistant Tuberculosis - transmission</topic><topic>Female</topic><topic>Ferries</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Genotype</topic><topic>HIV</topic><topic>HIV Infections - complications</topic><topic>HIV Infections - virology</topic><topic>Hospital admissions</topic><topic>Hospitals, Rural</topic><topic>Humans</topic><topic>Infection control</topic><topic>Infectious diseases</topic><topic>Isoniazid - therapeutic use</topic><topic>Major and Brief Reports</topic><topic>Male</topic><topic>Medical sciences</topic><topic>Microbiology</topic><topic>Multidrug resistant tuberculosis</topic><topic>Mutation</topic><topic>Mycobacterium tuberculosis</topic><topic>Mycobacterium tuberculosis - classification</topic><topic>Mycobacterium tuberculosis - genetics</topic><topic>Mycobacterium tuberculosis - isolation & purification</topic><topic>Polymorphism, Restriction Fragment Length</topic><topic>Prevalence</topic><topic>Pyrazinamide - therapeutic use</topic><topic>Retrospective Studies</topic><topic>Rifampin - therapeutic use</topic><topic>Sequence Analysis, DNA</topic><topic>South Africa - epidemiology</topic><topic>Tuberculosis</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Gandhi, Neel R.</creatorcontrib><creatorcontrib>Weissman, Darren</creatorcontrib><creatorcontrib>Moodley, Prashini</creatorcontrib><creatorcontrib>Ramathal, Melissa</creatorcontrib><creatorcontrib>Elson, Inga</creatorcontrib><creatorcontrib>Kreiswirth, Barry N.</creatorcontrib><creatorcontrib>Mathema, Barun</creatorcontrib><creatorcontrib>Shashkina, Elena</creatorcontrib><creatorcontrib>Rothenberg, Richard</creatorcontrib><creatorcontrib>Moll, Anthony P.</creatorcontrib><creatorcontrib>Friedland, Gerald</creatorcontrib><creatorcontrib>Sturm, A. Willem</creatorcontrib><creatorcontrib>Shah, N. Sarita</creatorcontrib><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>The Journal of infectious diseases</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Gandhi, Neel R.</au><au>Weissman, Darren</au><au>Moodley, Prashini</au><au>Ramathal, Melissa</au><au>Elson, Inga</au><au>Kreiswirth, Barry N.</au><au>Mathema, Barun</au><au>Shashkina, Elena</au><au>Rothenberg, Richard</au><au>Moll, Anthony P.</au><au>Friedland, Gerald</au><au>Sturm, A. Willem</au><au>Shah, N. Sarita</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Nosocomial Transmission of Extensively Drug-Resistant Tuberculosis in a Rural Hospital in South Africa</atitle><jtitle>The Journal of infectious diseases</jtitle><addtitle>J Infect Dis</addtitle><date>2013-01-01</date><risdate>2013</risdate><volume>207</volume><issue>1</issue><spage>9</spage><epage>17</epage><pages>9-17</pages><issn>0022-1899</issn><eissn>1537-6613</eissn><coden>JIDIAQ</coden><abstract>Background. Extensively drug-resistant tuberculosis (XDR-tuberculosis) is a global public health threat, but few data exist elucidating factors driving this epidemic. The initial XDR-tuberculosis report from South Africa suggested transmission is an important factor, but detailed epidemiologic and molecular analyses were not available for further characterization. Methods. We performed a retrospective, observational study among XDR-tuberculosis patients to identify hospital-associated epidemiologic links. We used spoligotyping, IS6110-based restriction fragment-length polymorphism analysis, and sequencing of resistance-determining regions to identify clusters. Social network analysis was used to construct transmission networks among genotypically clustered patients. Results. Among 148 XDR-tuberculosis patients, 98% were infected with human immunodeficiency virus (HIV), and 59% had smear-positive tuberculosis. Nearly all (93%) were hospitalized while infectious with XDR-tuberculosis (median duration, 15 days; interquartile range: 10-25 days). Genotyping identified a predominant cluster comprising 96% of isolates. Epidemiologic links were identified for 82% of patients; social network analysis demonstrated multiple generations of transmission across a highly interconnected network. Conclusions. The XDR-tuberculosis epidemic in Tugela Ferry, South Africa, has been highly clonal. However, the epidemic is not the result of a point-source outbreak; rather, a high degree of interconnectedness allowed multiple generations of nosocomial transmission. Similar to the outbreaks of multidrug-resistant tuberculosis in the 1990s, poor infection control, delayed diagnosis, and a high HIV prevalence facilitated transmission. Important lessons from those outbreaks must be applied to stem further expansion of this epidemic.</abstract><cop>Oxford</cop><pub>Oxford University Press</pub><pmid>23166374</pmid><doi>10.1093/infdis/jis631</doi><tpages>9</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Adult Antitubercular Agents - therapeutic use BACTERIA Biological and medical sciences Cluster Analysis Cross Infection - complications Cross Infection - epidemiology Cross Infection - microbiology Cross Infection - transmission Data transmission Disease transmission Drug Therapy, Combination Epidemics Ethambutol - therapeutic use Extensively Drug-Resistant Tuberculosis - complications Extensively Drug-Resistant Tuberculosis - epidemiology Extensively Drug-Resistant Tuberculosis - microbiology Extensively Drug-Resistant Tuberculosis - transmission Female Ferries Fundamental and applied biological sciences. Psychology Genotype HIV HIV Infections - complications HIV Infections - virology Hospital admissions Hospitals, Rural Humans Infection control Infectious diseases Isoniazid - therapeutic use Major and Brief Reports Male Medical sciences Microbiology Multidrug resistant tuberculosis Mutation Mycobacterium tuberculosis Mycobacterium tuberculosis - classification Mycobacterium tuberculosis - genetics Mycobacterium tuberculosis - isolation & purification Polymorphism, Restriction Fragment Length Prevalence Pyrazinamide - therapeutic use Retrospective Studies Rifampin - therapeutic use Sequence Analysis, DNA South Africa - epidemiology Tuberculosis |
title | Nosocomial Transmission of Extensively Drug-Resistant Tuberculosis in a Rural Hospital in South Africa |
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