Loading…

Navigating legal constraints in clinical data warehousing: a case study in personalized medicine

Personalized medicine relies in part upon comprehensive data on patient treatment and outcomes, both for analysis leading to improved models that provide the basis for enhanced treatment, and for direct use in clinical decision-making. A data warehouse is an information technology for combining and...

Full description

Saved in:
Bibliographic Details
Published in:Interface focus 2013-04, Vol.3 (2), p.20120088-20120088
Main Authors: Jefferys, Benjamin R., Nwankwo, Iheanyi, Neri, Elias, Chang, David C. W., Shamardin, Lev, Hänold, Stefanie, Graf, Norbert, Forgó, Nikolaus, Coveney, Peter
Format: Article
Language:English
Subjects:
Citations: Items that this one cites
Items that cite this one
Online Access:Get full text
Tags: Add Tag
No Tags, Be the first to tag this record!
cited_by cdi_FETCH-LOGICAL-c562t-4fd02d12de2a40aca5a24337e0151718f801fcd4cc44b3dcf9bcec55642ce4383
cites cdi_FETCH-LOGICAL-c562t-4fd02d12de2a40aca5a24337e0151718f801fcd4cc44b3dcf9bcec55642ce4383
container_end_page 20120088
container_issue 2
container_start_page 20120088
container_title Interface focus
container_volume 3
creator Jefferys, Benjamin R.
Nwankwo, Iheanyi
Neri, Elias
Chang, David C. W.
Shamardin, Lev
Hänold, Stefanie
Graf, Norbert
Forgó, Nikolaus
Coveney, Peter
description Personalized medicine relies in part upon comprehensive data on patient treatment and outcomes, both for analysis leading to improved models that provide the basis for enhanced treatment, and for direct use in clinical decision-making. A data warehouse is an information technology for combining and standardizing multiple databases. Data warehousing of clinical data is constrained by many legal and ethical considerations, owing to the sensitive nature of the data being stored. We describe an unconstrained clinical data warehousing architecture, some of the legal constraints that have led us to reconsider this architecture, and the legal and technical solutions to these constraints developed for the clinical data warehouse in the personalized medicine project p-medicine. We also propose some changes to the legal constraints that will further enable clinical research.
doi_str_mv 10.1098/rsfs.2012.0088
format article
fullrecord <record><control><sourceid>proquest_pubme</sourceid><recordid>TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_3638485</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>1490774937</sourcerecordid><originalsourceid>FETCH-LOGICAL-c562t-4fd02d12de2a40aca5a24337e0151718f801fcd4cc44b3dcf9bcec55642ce4383</originalsourceid><addsrcrecordid>eNp9kc1v1DAQxSMEolXplSPKkcsu_kricECCihakFUhbQNzMrDPZumTtxZMsbP96HKVd8SHwxZb983sz87LsMWdzzmr9LFJLc8G4mDOm9b3sWDAlZrpm_P7dWdf6KDslumZpqZJrJh5mR0IpURWSH2df3sHOraF3fp13uIYut8FTH8H5nnLnc9s572y6b6CH_DtEvAoDJfx5DrkFwpz6odmP6BYjBQ-du8Em32DjrPP4KHvQQkd4erufZB_PX384ezNbvL94e_ZyMbNFKfqZahsmGi4aFKAYWChAKCkrZLzgFdetZry1jbJWqZVsbFuvLNqiKJWwqKSWJ9mLSXc7rJK3RZ-a6Mw2ug3EvQngzO8v3l2ZddgZWUqtdJEEnt4KxPBtQOrNxpHFrgOPqWPDVc2qStWySuh8Qm0MRBHbgw1nZkzGjMmYMRkzJpM-PPm1uAN-l0MC5ATEsE9TCtZhvzfXYYhpnvRvWfjfr-Xl-eVOugRryZkqFC_NjdtOKtI4ogGN-EP0b4_Z5OGoxx-HyiF-NWUlq8J80sqIz4slv6iX5pX8CdRnze0</addsrcrecordid><sourcetype>Open Access Repository</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>1490774937</pqid></control><display><type>article</type><title>Navigating legal constraints in clinical data warehousing: a case study in personalized medicine</title><source>PubMed Central(OpenAccess)</source><source>Royal Society Publishing Jisc Collections Royal Society Journals Read &amp; Publish Transitional Agreement 2025 (reading list)</source><creator>Jefferys, Benjamin R. ; Nwankwo, Iheanyi ; Neri, Elias ; Chang, David C. W. ; Shamardin, Lev ; Hänold, Stefanie ; Graf, Norbert ; Forgó, Nikolaus ; Coveney, Peter</creator><creatorcontrib>Jefferys, Benjamin R. ; Nwankwo, Iheanyi ; Neri, Elias ; Chang, David C. W. ; Shamardin, Lev ; Hänold, Stefanie ; Graf, Norbert ; Forgó, Nikolaus ; Coveney, Peter</creatorcontrib><description>Personalized medicine relies in part upon comprehensive data on patient treatment and outcomes, both for analysis leading to improved models that provide the basis for enhanced treatment, and for direct use in clinical decision-making. A data warehouse is an information technology for combining and standardizing multiple databases. Data warehousing of clinical data is constrained by many legal and ethical considerations, owing to the sensitive nature of the data being stored. We describe an unconstrained clinical data warehousing architecture, some of the legal constraints that have led us to reconsider this architecture, and the legal and technical solutions to these constraints developed for the clinical data warehouse in the personalized medicine project p-medicine. We also propose some changes to the legal constraints that will further enable clinical research.</description><identifier>ISSN: 2042-8898</identifier><identifier>EISSN: 2042-8901</identifier><identifier>DOI: 10.1098/rsfs.2012.0088</identifier><identifier>PMID: 24427531</identifier><language>eng</language><publisher>England: The Royal Society</publisher><subject>Clinical Data Warehouse ; Legal And Ethical Constraints ; Personalized Medicine</subject><ispartof>Interface focus, 2013-04, Vol.3 (2), p.20120088-20120088</ispartof><rights>2013 The Author(s) Published by the Royal Society. All rights reserved.</rights><rights>2013 The Author(s) Published by the Royal Society. All rights reserved. 2013</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c562t-4fd02d12de2a40aca5a24337e0151718f801fcd4cc44b3dcf9bcec55642ce4383</citedby><cites>FETCH-LOGICAL-c562t-4fd02d12de2a40aca5a24337e0151718f801fcd4cc44b3dcf9bcec55642ce4383</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3638485/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3638485/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,727,780,784,885,27924,27925,53791,53793</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/24427531$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Jefferys, Benjamin R.</creatorcontrib><creatorcontrib>Nwankwo, Iheanyi</creatorcontrib><creatorcontrib>Neri, Elias</creatorcontrib><creatorcontrib>Chang, David C. W.</creatorcontrib><creatorcontrib>Shamardin, Lev</creatorcontrib><creatorcontrib>Hänold, Stefanie</creatorcontrib><creatorcontrib>Graf, Norbert</creatorcontrib><creatorcontrib>Forgó, Nikolaus</creatorcontrib><creatorcontrib>Coveney, Peter</creatorcontrib><title>Navigating legal constraints in clinical data warehousing: a case study in personalized medicine</title><title>Interface focus</title><addtitle>Interface Focus</addtitle><addtitle>Interface Focus</addtitle><description>Personalized medicine relies in part upon comprehensive data on patient treatment and outcomes, both for analysis leading to improved models that provide the basis for enhanced treatment, and for direct use in clinical decision-making. A data warehouse is an information technology for combining and standardizing multiple databases. Data warehousing of clinical data is constrained by many legal and ethical considerations, owing to the sensitive nature of the data being stored. We describe an unconstrained clinical data warehousing architecture, some of the legal constraints that have led us to reconsider this architecture, and the legal and technical solutions to these constraints developed for the clinical data warehouse in the personalized medicine project p-medicine. We also propose some changes to the legal constraints that will further enable clinical research.</description><subject>Clinical Data Warehouse</subject><subject>Legal And Ethical Constraints</subject><subject>Personalized Medicine</subject><issn>2042-8898</issn><issn>2042-8901</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2013</creationdate><recordtype>article</recordtype><recordid>eNp9kc1v1DAQxSMEolXplSPKkcsu_kricECCihakFUhbQNzMrDPZumTtxZMsbP96HKVd8SHwxZb983sz87LsMWdzzmr9LFJLc8G4mDOm9b3sWDAlZrpm_P7dWdf6KDslumZpqZJrJh5mR0IpURWSH2df3sHOraF3fp13uIYut8FTH8H5nnLnc9s572y6b6CH_DtEvAoDJfx5DrkFwpz6odmP6BYjBQ-du8Em32DjrPP4KHvQQkd4erufZB_PX384ezNbvL94e_ZyMbNFKfqZahsmGi4aFKAYWChAKCkrZLzgFdetZry1jbJWqZVsbFuvLNqiKJWwqKSWJ9mLSXc7rJK3RZ-a6Mw2ug3EvQngzO8v3l2ZddgZWUqtdJEEnt4KxPBtQOrNxpHFrgOPqWPDVc2qStWySuh8Qm0MRBHbgw1nZkzGjMmYMRkzJpM-PPm1uAN-l0MC5ATEsE9TCtZhvzfXYYhpnvRvWfjfr-Xl-eVOugRryZkqFC_NjdtOKtI4ogGN-EP0b4_Z5OGoxx-HyiF-NWUlq8J80sqIz4slv6iX5pX8CdRnze0</recordid><startdate>20130406</startdate><enddate>20130406</enddate><creator>Jefferys, Benjamin R.</creator><creator>Nwankwo, Iheanyi</creator><creator>Neri, Elias</creator><creator>Chang, David C. W.</creator><creator>Shamardin, Lev</creator><creator>Hänold, Stefanie</creator><creator>Graf, Norbert</creator><creator>Forgó, Nikolaus</creator><creator>Coveney, Peter</creator><general>The Royal Society</general><scope>BSCLL</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20130406</creationdate><title>Navigating legal constraints in clinical data warehousing: a case study in personalized medicine</title><author>Jefferys, Benjamin R. ; Nwankwo, Iheanyi ; Neri, Elias ; Chang, David C. W. ; Shamardin, Lev ; Hänold, Stefanie ; Graf, Norbert ; Forgó, Nikolaus ; Coveney, Peter</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c562t-4fd02d12de2a40aca5a24337e0151718f801fcd4cc44b3dcf9bcec55642ce4383</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2013</creationdate><topic>Clinical Data Warehouse</topic><topic>Legal And Ethical Constraints</topic><topic>Personalized Medicine</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Jefferys, Benjamin R.</creatorcontrib><creatorcontrib>Nwankwo, Iheanyi</creatorcontrib><creatorcontrib>Neri, Elias</creatorcontrib><creatorcontrib>Chang, David C. W.</creatorcontrib><creatorcontrib>Shamardin, Lev</creatorcontrib><creatorcontrib>Hänold, Stefanie</creatorcontrib><creatorcontrib>Graf, Norbert</creatorcontrib><creatorcontrib>Forgó, Nikolaus</creatorcontrib><creatorcontrib>Coveney, Peter</creatorcontrib><collection>Istex</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Interface focus</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Jefferys, Benjamin R.</au><au>Nwankwo, Iheanyi</au><au>Neri, Elias</au><au>Chang, David C. W.</au><au>Shamardin, Lev</au><au>Hänold, Stefanie</au><au>Graf, Norbert</au><au>Forgó, Nikolaus</au><au>Coveney, Peter</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Navigating legal constraints in clinical data warehousing: a case study in personalized medicine</atitle><jtitle>Interface focus</jtitle><stitle>Interface Focus</stitle><addtitle>Interface Focus</addtitle><date>2013-04-06</date><risdate>2013</risdate><volume>3</volume><issue>2</issue><spage>20120088</spage><epage>20120088</epage><pages>20120088-20120088</pages><issn>2042-8898</issn><eissn>2042-8901</eissn><abstract>Personalized medicine relies in part upon comprehensive data on patient treatment and outcomes, both for analysis leading to improved models that provide the basis for enhanced treatment, and for direct use in clinical decision-making. A data warehouse is an information technology for combining and standardizing multiple databases. Data warehousing of clinical data is constrained by many legal and ethical considerations, owing to the sensitive nature of the data being stored. We describe an unconstrained clinical data warehousing architecture, some of the legal constraints that have led us to reconsider this architecture, and the legal and technical solutions to these constraints developed for the clinical data warehouse in the personalized medicine project p-medicine. We also propose some changes to the legal constraints that will further enable clinical research.</abstract><cop>England</cop><pub>The Royal Society</pub><pmid>24427531</pmid><doi>10.1098/rsfs.2012.0088</doi><tpages>1</tpages><oa>free_for_read</oa></addata></record>
fulltext fulltext
identifier ISSN: 2042-8898
ispartof Interface focus, 2013-04, Vol.3 (2), p.20120088-20120088
issn 2042-8898
2042-8901
language eng
recordid cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_3638485
source PubMed Central(OpenAccess); Royal Society Publishing Jisc Collections Royal Society Journals Read & Publish Transitional Agreement 2025 (reading list)
subjects Clinical Data Warehouse
Legal And Ethical Constraints
Personalized Medicine
title Navigating legal constraints in clinical data warehousing: a case study in personalized medicine
url http://sfxeu10.hosted.exlibrisgroup.com/loughborough?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2024-12-28T05%3A32%3A42IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_pubme&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Navigating%20legal%20constraints%20in%20clinical%20data%20warehousing:%20a%20case%20study%20in%20personalized%20medicine&rft.jtitle=Interface%20focus&rft.au=Jefferys,%20Benjamin%20R.&rft.date=2013-04-06&rft.volume=3&rft.issue=2&rft.spage=20120088&rft.epage=20120088&rft.pages=20120088-20120088&rft.issn=2042-8898&rft.eissn=2042-8901&rft_id=info:doi/10.1098/rsfs.2012.0088&rft_dat=%3Cproquest_pubme%3E1490774937%3C/proquest_pubme%3E%3Cgrp_id%3Ecdi_FETCH-LOGICAL-c562t-4fd02d12de2a40aca5a24337e0151718f801fcd4cc44b3dcf9bcec55642ce4383%3C/grp_id%3E%3Coa%3E%3C/oa%3E%3Curl%3E%3C/url%3E&rft_id=info:oai/&rft_pqid=1490774937&rft_id=info:pmid/24427531&rfr_iscdi=true