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Mechanistic and environmental control of the prevalence and lifetime of amyloid oligomers
Amyloid fibrils are self-assembled protein aggregates implicated in a number of human diseases. Fragmentation-dominated models for the self-assembly of amyloid fibrils have had important successes in explaining the kinetics of amyloid fibril formation but predict fibril length distributions that do...
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Published in: | Nature communications 2013, Vol.4 (1), p.1891-1891, Article 1891 |
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description | Amyloid fibrils are self-assembled protein aggregates implicated in a number of human diseases. Fragmentation-dominated models for the self-assembly of amyloid fibrils have had important successes in explaining the kinetics of amyloid fibril formation but predict fibril length distributions that do not match experiments. Here we resolve this inconsistency using a combination of experimental kinetic measurements and computer simulations. We provide evidence for a structural transition that occurs at a critical fibril mass concentration, or CFC, above which fragmentation of fibrils is suppressed. Our simulations predict the formation of distinct fibril length distributions above and below the CFC, which we confirm by electron microscopy. These results point to a new picture of amyloid fibril growth in which structural transitions that occur during self-assembly have strong effects on the final population of aggregate species with small, and potentially cytotoxic, oligomers dominating for long periods of time at protein concentrations below the CFC.
Amyloid fibrils are implicated in a number of diseases but the origin of their length distributions is poorly understood. Here, evidence is presented to support a structural transition at a critical mass concentration, above which fragmentation of fibrils is suppressed. |
doi_str_mv | 10.1038/ncomms2909 |
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Amyloid fibrils are implicated in a number of diseases but the origin of their length distributions is poorly understood. Here, evidence is presented to support a structural transition at a critical mass concentration, above which fragmentation of fibrils is suppressed.</description><identifier>ISSN: 2041-1723</identifier><identifier>EISSN: 2041-1723</identifier><identifier>DOI: 10.1038/ncomms2909</identifier><identifier>PMID: 23695685</identifier><language>eng</language><publisher>London: Nature Publishing Group UK</publisher><subject>631/57/2272 ; Alzheimer's disease ; Amyloid - chemistry ; Amyloid - metabolism ; Amyloid - ultrastructure ; Animals ; Biochemistry, Molecular Biology ; Cattle ; Computer Simulation ; Humanities and Social Sciences ; Humans ; Insulin ; Insulin - chemistry ; Insulin - metabolism ; Kinetics ; Life Sciences ; Models, Molecular ; Molecular Weight ; multidisciplinary ; Protein Structure, Quaternary ; Proteins ; Science ; Science (multidisciplinary) ; Simulation ; Sodium Chloride - pharmacology ; Time Factors</subject><ispartof>Nature communications, 2013, Vol.4 (1), p.1891-1891, Article 1891</ispartof><rights>Springer Nature Limited 2013</rights><rights>Copyright Nature Publishing Group May 2013</rights><rights>Distributed under a Creative Commons Attribution 4.0 International License</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c477t-f93767c6da3137ba3337f6cd3f60cf0b4bbd337137bac25e3eade42e32b5f2443</citedby><cites>FETCH-LOGICAL-c477t-f93767c6da3137ba3337f6cd3f60cf0b4bbd337137bac25e3eade42e32b5f2443</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.proquest.com/docview/1355894955/fulltextPDF?pq-origsite=primo$$EPDF$$P50$$Gproquest$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.proquest.com/docview/1355894955?pq-origsite=primo$$EHTML$$P50$$Gproquest$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,885,4024,25753,27923,27924,27925,37012,37013,44590,53791,53793,75126</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/23695685$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink><backlink>$$Uhttps://insu.hal.science/insu-02782113$$DView record in HAL$$Hfree_for_read</backlink></links><search><creatorcontrib>Morris, Ryan J.</creatorcontrib><creatorcontrib>Eden, Kym</creatorcontrib><creatorcontrib>Yarwood, Reuben</creatorcontrib><creatorcontrib>Jourdain, Line</creatorcontrib><creatorcontrib>Allen, Rosalind J.</creatorcontrib><creatorcontrib>MacPhee, Cait E.</creatorcontrib><title>Mechanistic and environmental control of the prevalence and lifetime of amyloid oligomers</title><title>Nature communications</title><addtitle>Nat Commun</addtitle><addtitle>Nat Commun</addtitle><description>Amyloid fibrils are self-assembled protein aggregates implicated in a number of human diseases. Fragmentation-dominated models for the self-assembly of amyloid fibrils have had important successes in explaining the kinetics of amyloid fibril formation but predict fibril length distributions that do not match experiments. Here we resolve this inconsistency using a combination of experimental kinetic measurements and computer simulations. We provide evidence for a structural transition that occurs at a critical fibril mass concentration, or CFC, above which fragmentation of fibrils is suppressed. Our simulations predict the formation of distinct fibril length distributions above and below the CFC, which we confirm by electron microscopy. These results point to a new picture of amyloid fibril growth in which structural transitions that occur during self-assembly have strong effects on the final population of aggregate species with small, and potentially cytotoxic, oligomers dominating for long periods of time at protein concentrations below the CFC.
Amyloid fibrils are implicated in a number of diseases but the origin of their length distributions is poorly understood. Here, evidence is presented to support a structural transition at a critical mass concentration, above which fragmentation of fibrils is suppressed.</description><subject>631/57/2272</subject><subject>Alzheimer's disease</subject><subject>Amyloid - chemistry</subject><subject>Amyloid - metabolism</subject><subject>Amyloid - ultrastructure</subject><subject>Animals</subject><subject>Biochemistry, Molecular Biology</subject><subject>Cattle</subject><subject>Computer Simulation</subject><subject>Humanities and Social Sciences</subject><subject>Humans</subject><subject>Insulin</subject><subject>Insulin - chemistry</subject><subject>Insulin - metabolism</subject><subject>Kinetics</subject><subject>Life Sciences</subject><subject>Models, Molecular</subject><subject>Molecular Weight</subject><subject>multidisciplinary</subject><subject>Protein Structure, Quaternary</subject><subject>Proteins</subject><subject>Science</subject><subject>Science (multidisciplinary)</subject><subject>Simulation</subject><subject>Sodium Chloride - 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Academic</collection><collection>Hyper Article en Ligne (HAL)</collection><collection>Hyper Article en Ligne (HAL) (Open Access)</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Nature communications</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Morris, Ryan J.</au><au>Eden, Kym</au><au>Yarwood, Reuben</au><au>Jourdain, Line</au><au>Allen, Rosalind J.</au><au>MacPhee, Cait E.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Mechanistic and environmental control of the prevalence and lifetime of amyloid oligomers</atitle><jtitle>Nature communications</jtitle><stitle>Nat Commun</stitle><addtitle>Nat Commun</addtitle><date>2013</date><risdate>2013</risdate><volume>4</volume><issue>1</issue><spage>1891</spage><epage>1891</epage><pages>1891-1891</pages><artnum>1891</artnum><issn>2041-1723</issn><eissn>2041-1723</eissn><abstract>Amyloid fibrils are self-assembled protein aggregates implicated in a number of human diseases. Fragmentation-dominated models for the self-assembly of amyloid fibrils have had important successes in explaining the kinetics of amyloid fibril formation but predict fibril length distributions that do not match experiments. Here we resolve this inconsistency using a combination of experimental kinetic measurements and computer simulations. We provide evidence for a structural transition that occurs at a critical fibril mass concentration, or CFC, above which fragmentation of fibrils is suppressed. Our simulations predict the formation of distinct fibril length distributions above and below the CFC, which we confirm by electron microscopy. These results point to a new picture of amyloid fibril growth in which structural transitions that occur during self-assembly have strong effects on the final population of aggregate species with small, and potentially cytotoxic, oligomers dominating for long periods of time at protein concentrations below the CFC.
Amyloid fibrils are implicated in a number of diseases but the origin of their length distributions is poorly understood. Here, evidence is presented to support a structural transition at a critical mass concentration, above which fragmentation of fibrils is suppressed.</abstract><cop>London</cop><pub>Nature Publishing Group UK</pub><pmid>23695685</pmid><doi>10.1038/ncomms2909</doi><tpages>1</tpages><oa>free_for_read</oa></addata></record> |
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subjects | 631/57/2272 Alzheimer's disease Amyloid - chemistry Amyloid - metabolism Amyloid - ultrastructure Animals Biochemistry, Molecular Biology Cattle Computer Simulation Humanities and Social Sciences Humans Insulin Insulin - chemistry Insulin - metabolism Kinetics Life Sciences Models, Molecular Molecular Weight multidisciplinary Protein Structure, Quaternary Proteins Science Science (multidisciplinary) Simulation Sodium Chloride - pharmacology Time Factors |
title | Mechanistic and environmental control of the prevalence and lifetime of amyloid oligomers |
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