Structural and molecular basis of ZNRF3/RNF43 transmembrane ubiquitin ligase inhibition by the Wnt agonist R-spondin

• Published in: Nature communications 2013-11, Vol.4 (1), p.2787-2787, Article 2787
• Main Authors: Zebisch, Matthias, Xu, Yang, Krastev, Christos, MacDonald, Bryan T., Chen, Maorong, Gilbert, Robert J. C., He, Xi, Jones, E. Yvonne
• Format: Article
• Language: English
• Subjects: 631/45/535; 631/80/474/582; 631/80/86; Animals; Dimerization; DNA-Binding Proteins - antagonists & inhibitors; DNA-Binding Proteins - metabolism; Humanities and Social Sciences; Humans; Mice; multidisciplinary; Oncogene Proteins - antagonists & inhibitors; Oncogene Proteins - metabolism; Protein Conformation; Receptors, G-Protein-Coupled - metabolism; Science; Science (multidisciplinary); Thrombospondins - chemistry; Thrombospondins - metabolism; Ubiquitin-Protein Ligases - antagonists & inhibitors; Ubiquitin-Protein Ligases - metabolism; Wnt Signaling Pathway; Xenopus; Zebrafish
• ISSN: 2041-1723; 2041-1723
• DOI: 10.1038/ncomms3787

The four R-spondin (Rspo) proteins are secreted agonists of Wnt signalling in vertebrates, functioning in embryogenesis and adult stem cell biology. Through ubiquitination and degradation of Wnt receptors, the transmembrane E3 ubiquitin ligase ZNRF3 and related RNF43 antagonize Wnt signalling. Rspo ligands have been reported to inhibit the ligase activity through direct interaction with ZNRF3 and RNF43. Here we report multiple crystal structures of the ZNRF3 ectodomain (ZNRF3 ecto ), a signalling-competent Furin1–Furin2 (Fu1–Fu2) fragment of Rspo2 (Rspo2 Fu1–Fu2 ), and Rspo2 Fu1–Fu2 in complex with ZNRF3 ecto , or RNF43 ecto . A prominent loop in Fu1 clamps into equivalent grooves in the ZNRF3 ecto and RNF43 ecto surface. Rspo binding enhances dimerization of ZNRF3 ecto but not of RNF43 ecto . Comparison of the four Rspo proteins, mutants and chimeras in biophysical and cellular assays shows that their signalling potency depends on their ability to recruit ZNRF3 or RNF43 via Fu1 into a complex with LGR receptors, which interact with Rspo via Fu2. R-spondins are secreted factors that potentiate Wnt signalling by inhibiting the degradation of Wnt receptors by transmembrane E3 ubiquitin ligases. Zebisch et al. present a panel of crystal structures that reveal how this inhibition occurs.