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Identification and characterization of a gene cluster required for proper rod shape, cell division, and pathogenesis in Clostridium difficile
Little is known about cell division in Clostridium difficile, a strict anaerobe that causes serious diarrheal diseases in people whose normal intestinal microbiome has been perturbed by treatment with broad-spectrum antibiotics. Here we identify and characterize a gene cluster encoding three cell di...
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Published in: | Journal of bacteriology 2014-06, Vol.196 (12), p.2290-2300 |
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description | Little is known about cell division in Clostridium difficile, a strict anaerobe that causes serious diarrheal diseases in people whose normal intestinal microbiome has been perturbed by treatment with broad-spectrum antibiotics. Here we identify and characterize a gene cluster encoding three cell division proteins found only in C. difficile and a small number of closely related bacteria. These proteins were named MldA, MldB, and MldC, for midcell localizing division proteins. MldA is predicted to be a membrane protein with coiled-coil domains and a peptidoglycan-binding SPOR domain. MldB and MldC are predicted to be cytoplasmic proteins; MldB has two predicted coiled-coil domains, but MldC lacks obvious conserved domains or sequence motifs. Mutants of mldA or mldB had morphological defects, including loss of rod shape (a curved cell phenotype) and inefficient separation of daughter cells (a chaining phenotype). Fusions of cyan fluorescent protein (CFP) to MldA, MldB, and MldC revealed that all three proteins localize sharply to the division site. This application of CFP was possible because we discovered that O2-dependent fluorescent proteins produced anaerobically can acquire fluorescence after cells are fixed with cross-linkers to preserve native patterns of protein localization. Mutants lacking the Mld proteins are severely attenuated for pathogenesis in a hamster model of C. difficile infection. Because all three Mld proteins are essentially unique to C. difficile, they might be exploited as targets for antibiotics that combat C. difficile without disrupting the intestinal microbiome. |
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Here we identify and characterize a gene cluster encoding three cell division proteins found only in C. difficile and a small number of closely related bacteria. These proteins were named MldA, MldB, and MldC, for midcell localizing division proteins. MldA is predicted to be a membrane protein with coiled-coil domains and a peptidoglycan-binding SPOR domain. MldB and MldC are predicted to be cytoplasmic proteins; MldB has two predicted coiled-coil domains, but MldC lacks obvious conserved domains or sequence motifs. Mutants of mldA or mldB had morphological defects, including loss of rod shape (a curved cell phenotype) and inefficient separation of daughter cells (a chaining phenotype). Fusions of cyan fluorescent protein (CFP) to MldA, MldB, and MldC revealed that all three proteins localize sharply to the division site. This application of CFP was possible because we discovered that O2-dependent fluorescent proteins produced anaerobically can acquire fluorescence after cells are fixed with cross-linkers to preserve native patterns of protein localization. Mutants lacking the Mld proteins are severely attenuated for pathogenesis in a hamster model of C. difficile infection. Because all three Mld proteins are essentially unique to C. difficile, they might be exploited as targets for antibiotics that combat C. difficile without disrupting the intestinal microbiome.</description><identifier>ISSN: 0021-9193</identifier><identifier>EISSN: 1098-5530</identifier><identifier>DOI: 10.1128/JB.00038-14</identifier><identifier>PMID: 24727226</identifier><identifier>CODEN: JOBAAY</identifier><language>eng</language><publisher>United States: American Society for Microbiology</publisher><subject>Animals ; Bacterial proteins ; Bacterial Proteins - genetics ; Bacterial Proteins - metabolism ; Bacteriology ; Binding sites ; Cell division ; Cell Division - physiology ; Clostridium difficile ; Clostridium difficile - cytology ; Clostridium difficile - genetics ; Clostridium difficile - metabolism ; Clostridium difficile - pathogenicity ; Clostridium Infections - microbiology ; Cricetinae ; Diarrhea ; Escherichia coli - genetics ; Escherichia coli - metabolism ; Gene Expression Regulation, Bacterial - physiology ; Genotype & phenotype ; Gram-positive bacteria ; Morphology ; Multigene Family ; Mutation</subject><ispartof>Journal of bacteriology, 2014-06, Vol.196 (12), p.2290-2300</ispartof><rights>Copyright © 2014, American Society for Microbiology. All Rights Reserved.</rights><rights>Copyright American Society for Microbiology Jun 2014</rights><rights>Copyright © 2014, American Society for Microbiology. All Rights Reserved. 2014 American Society for Microbiology</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c442t-854cb2c4ab7f80a84a058cf590c2a5f75a5dde289c5ad72207ad4ff77491ea7a3</citedby><cites>FETCH-LOGICAL-c442t-854cb2c4ab7f80a84a058cf590c2a5f75a5dde289c5ad72207ad4ff77491ea7a3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4054185/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4054185/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,724,777,781,882,3175,27905,27906,53772,53774</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/24727226$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Ransom, Eric M</creatorcontrib><creatorcontrib>Williams, Kyle B</creatorcontrib><creatorcontrib>Weiss, David S</creatorcontrib><creatorcontrib>Ellermeier, Craig D</creatorcontrib><title>Identification and characterization of a gene cluster required for proper rod shape, cell division, and pathogenesis in Clostridium difficile</title><title>Journal of bacteriology</title><addtitle>J Bacteriol</addtitle><description>Little is known about cell division in Clostridium difficile, a strict anaerobe that causes serious diarrheal diseases in people whose normal intestinal microbiome has been perturbed by treatment with broad-spectrum antibiotics. Here we identify and characterize a gene cluster encoding three cell division proteins found only in C. difficile and a small number of closely related bacteria. These proteins were named MldA, MldB, and MldC, for midcell localizing division proteins. MldA is predicted to be a membrane protein with coiled-coil domains and a peptidoglycan-binding SPOR domain. MldB and MldC are predicted to be cytoplasmic proteins; MldB has two predicted coiled-coil domains, but MldC lacks obvious conserved domains or sequence motifs. Mutants of mldA or mldB had morphological defects, including loss of rod shape (a curved cell phenotype) and inefficient separation of daughter cells (a chaining phenotype). Fusions of cyan fluorescent protein (CFP) to MldA, MldB, and MldC revealed that all three proteins localize sharply to the division site. This application of CFP was possible because we discovered that O2-dependent fluorescent proteins produced anaerobically can acquire fluorescence after cells are fixed with cross-linkers to preserve native patterns of protein localization. Mutants lacking the Mld proteins are severely attenuated for pathogenesis in a hamster model of C. difficile infection. Because all three Mld proteins are essentially unique to C. difficile, they might be exploited as targets for antibiotics that combat C. difficile without disrupting the intestinal microbiome.</description><subject>Animals</subject><subject>Bacterial proteins</subject><subject>Bacterial Proteins - genetics</subject><subject>Bacterial Proteins - metabolism</subject><subject>Bacteriology</subject><subject>Binding sites</subject><subject>Cell division</subject><subject>Cell Division - physiology</subject><subject>Clostridium difficile</subject><subject>Clostridium difficile - cytology</subject><subject>Clostridium difficile - genetics</subject><subject>Clostridium difficile - metabolism</subject><subject>Clostridium difficile - pathogenicity</subject><subject>Clostridium Infections - microbiology</subject><subject>Cricetinae</subject><subject>Diarrhea</subject><subject>Escherichia coli - genetics</subject><subject>Escherichia coli - metabolism</subject><subject>Gene Expression Regulation, Bacterial - physiology</subject><subject>Genotype & phenotype</subject><subject>Gram-positive bacteria</subject><subject>Morphology</subject><subject>Multigene Family</subject><subject>Mutation</subject><issn>0021-9193</issn><issn>1098-5530</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2014</creationdate><recordtype>article</recordtype><recordid>eNqNkk9v1DAQxS0EokvhxB1Z4oJEU2xnvHEuleiqhVaVuMDZmvWfrqtsnNpJpfY79DvX6ZYKOHEaaeY3T_NGj5D3nB1yLtSX8-NDxlitKg4vyIKzVlVS1uwlWTAmeNXytt4jb3K-YowDSPGa7AloRCPEckHuz6zrx-CDwTHEnmJvqdlgQjO6FO52zegp0kvXO2q6KZcBTe56CslZ6mOiQ4rD3IuW5g0O7oAa13XUhpuQy_rBo-iA4ybOGjlkGnq66mIeU7Bh2hbSlwNC596SVx677N491X3y6_Tk5-p7dfHj29nq60VlAMRYKQlmLQzguvGKoQJkUhkvW2YESt9IlNY6oVoj0RafrEEL3jcNtNxhg_U-OdrpDtN666wpL0jY6SGFLaZbHTHovyd92OjLeKOBSeBKFoFPTwIpXk8uj3ob8uwaexenrLmEdlkvoW7_A61BwVIpUdCP_6BXcUp9-cRMMWCi4apQn3eUSTHn5Pzz3ZzpORH6_Fg_JkJzKPSHP60-s78jUD8AoPGztg</recordid><startdate>20140601</startdate><enddate>20140601</enddate><creator>Ransom, Eric M</creator><creator>Williams, Kyle B</creator><creator>Weiss, David S</creator><creator>Ellermeier, Craig D</creator><general>American Society for Microbiology</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7TM</scope><scope>7U9</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>H94</scope><scope>M7N</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20140601</creationdate><title>Identification and characterization of a gene cluster required for proper rod shape, cell division, and pathogenesis in Clostridium difficile</title><author>Ransom, Eric M ; Williams, Kyle B ; Weiss, David S ; Ellermeier, Craig D</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c442t-854cb2c4ab7f80a84a058cf590c2a5f75a5dde289c5ad72207ad4ff77491ea7a3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2014</creationdate><topic>Animals</topic><topic>Bacterial proteins</topic><topic>Bacterial Proteins - genetics</topic><topic>Bacterial Proteins - metabolism</topic><topic>Bacteriology</topic><topic>Binding sites</topic><topic>Cell division</topic><topic>Cell Division - physiology</topic><topic>Clostridium difficile</topic><topic>Clostridium difficile - cytology</topic><topic>Clostridium difficile - genetics</topic><topic>Clostridium difficile - metabolism</topic><topic>Clostridium difficile - pathogenicity</topic><topic>Clostridium Infections - microbiology</topic><topic>Cricetinae</topic><topic>Diarrhea</topic><topic>Escherichia coli - genetics</topic><topic>Escherichia coli - metabolism</topic><topic>Gene Expression Regulation, Bacterial - physiology</topic><topic>Genotype & phenotype</topic><topic>Gram-positive bacteria</topic><topic>Morphology</topic><topic>Multigene Family</topic><topic>Mutation</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Ransom, Eric M</creatorcontrib><creatorcontrib>Williams, Kyle B</creatorcontrib><creatorcontrib>Weiss, David S</creatorcontrib><creatorcontrib>Ellermeier, Craig D</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Nucleic Acids Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Journal of bacteriology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Ransom, Eric M</au><au>Williams, Kyle B</au><au>Weiss, David S</au><au>Ellermeier, Craig D</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Identification and characterization of a gene cluster required for proper rod shape, cell division, and pathogenesis in Clostridium difficile</atitle><jtitle>Journal of bacteriology</jtitle><addtitle>J Bacteriol</addtitle><date>2014-06-01</date><risdate>2014</risdate><volume>196</volume><issue>12</issue><spage>2290</spage><epage>2300</epage><pages>2290-2300</pages><issn>0021-9193</issn><eissn>1098-5530</eissn><coden>JOBAAY</coden><abstract>Little is known about cell division in Clostridium difficile, a strict anaerobe that causes serious diarrheal diseases in people whose normal intestinal microbiome has been perturbed by treatment with broad-spectrum antibiotics. Here we identify and characterize a gene cluster encoding three cell division proteins found only in C. difficile and a small number of closely related bacteria. These proteins were named MldA, MldB, and MldC, for midcell localizing division proteins. MldA is predicted to be a membrane protein with coiled-coil domains and a peptidoglycan-binding SPOR domain. MldB and MldC are predicted to be cytoplasmic proteins; MldB has two predicted coiled-coil domains, but MldC lacks obvious conserved domains or sequence motifs. Mutants of mldA or mldB had morphological defects, including loss of rod shape (a curved cell phenotype) and inefficient separation of daughter cells (a chaining phenotype). Fusions of cyan fluorescent protein (CFP) to MldA, MldB, and MldC revealed that all three proteins localize sharply to the division site. This application of CFP was possible because we discovered that O2-dependent fluorescent proteins produced anaerobically can acquire fluorescence after cells are fixed with cross-linkers to preserve native patterns of protein localization. Mutants lacking the Mld proteins are severely attenuated for pathogenesis in a hamster model of C. difficile infection. Because all three Mld proteins are essentially unique to C. difficile, they might be exploited as targets for antibiotics that combat C. difficile without disrupting the intestinal microbiome.</abstract><cop>United States</cop><pub>American Society for Microbiology</pub><pmid>24727226</pmid><doi>10.1128/JB.00038-14</doi><tpages>11</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Animals Bacterial proteins Bacterial Proteins - genetics Bacterial Proteins - metabolism Bacteriology Binding sites Cell division Cell Division - physiology Clostridium difficile Clostridium difficile - cytology Clostridium difficile - genetics Clostridium difficile - metabolism Clostridium difficile - pathogenicity Clostridium Infections - microbiology Cricetinae Diarrhea Escherichia coli - genetics Escherichia coli - metabolism Gene Expression Regulation, Bacterial - physiology Genotype & phenotype Gram-positive bacteria Morphology Multigene Family Mutation |
title | Identification and characterization of a gene cluster required for proper rod shape, cell division, and pathogenesis in Clostridium difficile |
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