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Reconstruction and in vivo analysis of the extinct tbx5 gene from ancient wingless moa (Aves: Dinornithiformes)
The forelimb-specific gene tbx5 is highly conserved and essential for the development of forelimbs in zebrafish, mice, and humans. Amongst birds, a single order, Dinornithiformes, comprising the extinct wingless moa of New Zealand, are unique in having no skeletal evidence of forelimb-like structure...
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Published in: | BMC evolutionary biology 2014-05, Vol.14 (1), p.75-75, Article 75 |
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description | The forelimb-specific gene tbx5 is highly conserved and essential for the development of forelimbs in zebrafish, mice, and humans. Amongst birds, a single order, Dinornithiformes, comprising the extinct wingless moa of New Zealand, are unique in having no skeletal evidence of forelimb-like structures.
To determine the sequence of tbx5 in moa, we used a range of PCR-based techniques on ancient DNA to retrieve all nine tbx5 exons and splice sites from the giant moa, Dinornis. Moa Tbx5 is identical to chicken Tbx5 in being able to activate the downstream promotors of fgf10 and ANF. In addition we show that missexpression of moa tbx5 in the hindlimb of chicken embryos results in the formation of forelimb features, suggesting that Tbx5 was fully functional in wingless moa. An alternatively spliced exon 1 for tbx5 that is expressed specifically in the forelimb region was shown to be almost identical between moa and ostrich, suggesting that, as well as being fully functional, tbx5 is likely to have been expressed normally in moa since divergence from their flighted ancestors, approximately 60 mya.
The results suggests that, as in mice, moa tbx5 is necessary for the induction of forelimbs, but is not sufficient for their outgrowth. Moa Tbx5 may have played an important role in the development of moa's remnant forelimb girdle, and may be required for the formation of this structure. Our results further show that genetic changes affecting genes other than tbx5 must be responsible for the complete loss of forelimbs in moa. |
doi_str_mv | 10.1186/1471-2148-14-75 |
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To determine the sequence of tbx5 in moa, we used a range of PCR-based techniques on ancient DNA to retrieve all nine tbx5 exons and splice sites from the giant moa, Dinornis. Moa Tbx5 is identical to chicken Tbx5 in being able to activate the downstream promotors of fgf10 and ANF. In addition we show that missexpression of moa tbx5 in the hindlimb of chicken embryos results in the formation of forelimb features, suggesting that Tbx5 was fully functional in wingless moa. An alternatively spliced exon 1 for tbx5 that is expressed specifically in the forelimb region was shown to be almost identical between moa and ostrich, suggesting that, as well as being fully functional, tbx5 is likely to have been expressed normally in moa since divergence from their flighted ancestors, approximately 60 mya.
The results suggests that, as in mice, moa tbx5 is necessary for the induction of forelimbs, but is not sufficient for their outgrowth. Moa Tbx5 may have played an important role in the development of moa's remnant forelimb girdle, and may be required for the formation of this structure. Our results further show that genetic changes affecting genes other than tbx5 must be responsible for the complete loss of forelimbs in moa.</description><identifier>ISSN: 1471-2148</identifier><identifier>EISSN: 1471-2148</identifier><identifier>DOI: 10.1186/1471-2148-14-75</identifier><identifier>PMID: 24885927</identifier><language>eng</language><publisher>England: BioMed Central Ltd</publisher><subject>Amino acids ; Analysis ; Animals ; Atrial Natriuretic Factor - genetics ; Aves ; Avian Proteins - genetics ; Avian Proteins - metabolism ; Biological Evolution ; Chickens ; Cloning ; Colleges & universities ; Danio rerio ; Deoxyribonucleic acid ; Dinornis ; DNA ; Fibroblast Growth Factor 10 - genetics ; Flight, Animal ; Forelimb - embryology ; Gene expression ; Genes ; Genetic aspects ; Genomes ; Humans ; Mice ; Mutation ; New Zealand ; Palaeognathae - genetics ; Palaeognathae - physiology ; Struthioniformes - embryology ; T-Box Domain Proteins - genetics ; T-Box Domain Proteins - metabolism</subject><ispartof>BMC evolutionary biology, 2014-05, Vol.14 (1), p.75-75, Article 75</ispartof><rights>COPYRIGHT 2014 BioMed Central Ltd.</rights><rights>2014 Huynen et al.; licensee BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.</rights><rights>Copyright © 2014 Huynen et al.; licensee BioMed Central Ltd. 2014 Huynen et al.; licensee BioMed Central Ltd.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-b680t-23e39753a3f4d997a4d0f2107a6969ae056780074c6696b387bbf48ecb9119d3</citedby><cites>FETCH-LOGICAL-b680t-23e39753a3f4d997a4d0f2107a6969ae056780074c6696b387bbf48ecb9119d3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4101845/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.proquest.com/docview/1525027070?pq-origsite=primo$$EHTML$$P50$$Gproquest$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,885,25752,27923,27924,37011,37012,44589,53790,53792</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/24885927$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Huynen, Leon</creatorcontrib><creatorcontrib>Suzuki, Takayuki</creatorcontrib><creatorcontrib>Ogura, Toshihiko</creatorcontrib><creatorcontrib>Watanabe, Yusuke</creatorcontrib><creatorcontrib>Millar, Craig D</creatorcontrib><creatorcontrib>Hofreiter, Michael</creatorcontrib><creatorcontrib>Smith, Craig</creatorcontrib><creatorcontrib>Mirmoeini, Sara</creatorcontrib><creatorcontrib>Lambert, David M</creatorcontrib><title>Reconstruction and in vivo analysis of the extinct tbx5 gene from ancient wingless moa (Aves: Dinornithiformes)</title><title>BMC evolutionary biology</title><addtitle>BMC Evol Biol</addtitle><description>The forelimb-specific gene tbx5 is highly conserved and essential for the development of forelimbs in zebrafish, mice, and humans. Amongst birds, a single order, Dinornithiformes, comprising the extinct wingless moa of New Zealand, are unique in having no skeletal evidence of forelimb-like structures.
To determine the sequence of tbx5 in moa, we used a range of PCR-based techniques on ancient DNA to retrieve all nine tbx5 exons and splice sites from the giant moa, Dinornis. Moa Tbx5 is identical to chicken Tbx5 in being able to activate the downstream promotors of fgf10 and ANF. In addition we show that missexpression of moa tbx5 in the hindlimb of chicken embryos results in the formation of forelimb features, suggesting that Tbx5 was fully functional in wingless moa. An alternatively spliced exon 1 for tbx5 that is expressed specifically in the forelimb region was shown to be almost identical between moa and ostrich, suggesting that, as well as being fully functional, tbx5 is likely to have been expressed normally in moa since divergence from their flighted ancestors, approximately 60 mya.
The results suggests that, as in mice, moa tbx5 is necessary for the induction of forelimbs, but is not sufficient for their outgrowth. Moa Tbx5 may have played an important role in the development of moa's remnant forelimb girdle, and may be required for the formation of this structure. Our results further show that genetic changes affecting genes other than tbx5 must be responsible for the complete loss of forelimbs in moa.</description><subject>Amino acids</subject><subject>Analysis</subject><subject>Animals</subject><subject>Atrial Natriuretic Factor - genetics</subject><subject>Aves</subject><subject>Avian Proteins - genetics</subject><subject>Avian Proteins - metabolism</subject><subject>Biological Evolution</subject><subject>Chickens</subject><subject>Cloning</subject><subject>Colleges & universities</subject><subject>Danio rerio</subject><subject>Deoxyribonucleic acid</subject><subject>Dinornis</subject><subject>DNA</subject><subject>Fibroblast Growth Factor 10 - genetics</subject><subject>Flight, Animal</subject><subject>Forelimb - embryology</subject><subject>Gene expression</subject><subject>Genes</subject><subject>Genetic aspects</subject><subject>Genomes</subject><subject>Humans</subject><subject>Mice</subject><subject>Mutation</subject><subject>New Zealand</subject><subject>Palaeognathae - genetics</subject><subject>Palaeognathae - physiology</subject><subject>Struthioniformes - embryology</subject><subject>T-Box Domain Proteins - genetics</subject><subject>T-Box Domain Proteins - metabolism</subject><issn>1471-2148</issn><issn>1471-2148</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2014</creationdate><recordtype>article</recordtype><sourceid>PIMPY</sourceid><recordid>eNqNkk1r3DAQhk1padK0596KoJfk4ESfltxDYZv0IxAopLkLWZa9CraUSvI2-feR2XQblxSKDhpmnnkZ3pmieIvgMUKiOkGUoxIjKkpES86eFfu7zPNH8V7xKsZrCBEXGL0s9jAVgtWY7xf-0mjvYgqTTtY7oFwLrAMbu_E5VsNdtBH4DqS1AeY2WacTSM0tA71xBnTBjxnT1rgEflnXDyZGMHoFDlcbEz-AM-t8cDatbefDaOLR6-JFp4Zo3jz8B8XVl89Xp9_Ki-9fz09XF2VTCZhKTAypOSOKdLSta65oCzuMIFdVXdXKQFZxASGnusqJhgjeNB0VRjc1QnVLDoqPW9mbqRlNq_N8QQ3yJthRhTvplZXLirNr2fuNpAgiQVkW-LQVaKz_h8Cyov0oZ7_l7HeOJJ9FDh-mCP7nZGKSo43aDINyxk9RIkaoIAIT-D9oXhqGNc7o-7_Qaz-FvKuZwgxiDjn8Q_VqMNK6zucx9SwqV4zUrGIUz9TxE1R-rRltPgzT2ZxfNBwtGjKT8l30aopRnv-4XLInW1YHH2Mw3c4-BOV8vk8Y9u7x2nb873sl9zdF6Ig</recordid><startdate>20140514</startdate><enddate>20140514</enddate><creator>Huynen, Leon</creator><creator>Suzuki, Takayuki</creator><creator>Ogura, Toshihiko</creator><creator>Watanabe, Yusuke</creator><creator>Millar, Craig D</creator><creator>Hofreiter, Michael</creator><creator>Smith, Craig</creator><creator>Mirmoeini, Sara</creator><creator>Lambert, David M</creator><general>BioMed Central Ltd</general><general>BioMed Central</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>ISR</scope><scope>3V.</scope><scope>7QP</scope><scope>7QR</scope><scope>7SN</scope><scope>7SS</scope><scope>7TK</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M7P</scope><scope>P64</scope><scope>PATMY</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>PYCSY</scope><scope>RC3</scope><scope>7X8</scope><scope>F1W</scope><scope>H95</scope><scope>L.G</scope><scope>5PM</scope></search><sort><creationdate>20140514</creationdate><title>Reconstruction and in vivo analysis of the extinct tbx5 gene from ancient wingless moa (Aves: Dinornithiformes)</title><author>Huynen, Leon ; Suzuki, Takayuki ; Ogura, Toshihiko ; Watanabe, Yusuke ; Millar, Craig D ; Hofreiter, Michael ; Smith, Craig ; Mirmoeini, Sara ; Lambert, David M</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-b680t-23e39753a3f4d997a4d0f2107a6969ae056780074c6696b387bbf48ecb9119d3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2014</creationdate><topic>Amino acids</topic><topic>Analysis</topic><topic>Animals</topic><topic>Atrial Natriuretic Factor - genetics</topic><topic>Aves</topic><topic>Avian Proteins - genetics</topic><topic>Avian Proteins - metabolism</topic><topic>Biological Evolution</topic><topic>Chickens</topic><topic>Cloning</topic><topic>Colleges & universities</topic><topic>Danio rerio</topic><topic>Deoxyribonucleic acid</topic><topic>Dinornis</topic><topic>DNA</topic><topic>Fibroblast Growth Factor 10 - genetics</topic><topic>Flight, Animal</topic><topic>Forelimb - embryology</topic><topic>Gene expression</topic><topic>Genes</topic><topic>Genetic aspects</topic><topic>Genomes</topic><topic>Humans</topic><topic>Mice</topic><topic>Mutation</topic><topic>New Zealand</topic><topic>Palaeognathae - genetics</topic><topic>Palaeognathae - physiology</topic><topic>Struthioniformes - embryology</topic><topic>T-Box Domain Proteins - genetics</topic><topic>T-Box Domain Proteins - metabolism</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Huynen, Leon</creatorcontrib><creatorcontrib>Suzuki, Takayuki</creatorcontrib><creatorcontrib>Ogura, Toshihiko</creatorcontrib><creatorcontrib>Watanabe, Yusuke</creatorcontrib><creatorcontrib>Millar, Craig D</creatorcontrib><creatorcontrib>Hofreiter, Michael</creatorcontrib><creatorcontrib>Smith, Craig</creatorcontrib><creatorcontrib>Mirmoeini, Sara</creatorcontrib><creatorcontrib>Lambert, David M</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Gale In Context: Science</collection><collection>ProQuest Central (Corporate)</collection><collection>Calcium & Calcified Tissue Abstracts</collection><collection>Chemoreception Abstracts</collection><collection>Ecology Abstracts</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Neurosciences Abstracts</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest One Sustainability</collection><collection>ProQuest Central</collection><collection>Agricultural & Environmental Science Collection</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>PML(ProQuest Medical Library)</collection><collection>Biological Science Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Environmental Science Database</collection><collection>Publicly Available Content Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>Environmental Science Collection</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 1: Biological Sciences & Living Resources</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>BMC evolutionary biology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Huynen, Leon</au><au>Suzuki, Takayuki</au><au>Ogura, Toshihiko</au><au>Watanabe, Yusuke</au><au>Millar, Craig D</au><au>Hofreiter, Michael</au><au>Smith, Craig</au><au>Mirmoeini, Sara</au><au>Lambert, David M</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Reconstruction and in vivo analysis of the extinct tbx5 gene from ancient wingless moa (Aves: Dinornithiformes)</atitle><jtitle>BMC evolutionary biology</jtitle><addtitle>BMC Evol Biol</addtitle><date>2014-05-14</date><risdate>2014</risdate><volume>14</volume><issue>1</issue><spage>75</spage><epage>75</epage><pages>75-75</pages><artnum>75</artnum><issn>1471-2148</issn><eissn>1471-2148</eissn><abstract>The forelimb-specific gene tbx5 is highly conserved and essential for the development of forelimbs in zebrafish, mice, and humans. Amongst birds, a single order, Dinornithiformes, comprising the extinct wingless moa of New Zealand, are unique in having no skeletal evidence of forelimb-like structures.
To determine the sequence of tbx5 in moa, we used a range of PCR-based techniques on ancient DNA to retrieve all nine tbx5 exons and splice sites from the giant moa, Dinornis. Moa Tbx5 is identical to chicken Tbx5 in being able to activate the downstream promotors of fgf10 and ANF. In addition we show that missexpression of moa tbx5 in the hindlimb of chicken embryos results in the formation of forelimb features, suggesting that Tbx5 was fully functional in wingless moa. An alternatively spliced exon 1 for tbx5 that is expressed specifically in the forelimb region was shown to be almost identical between moa and ostrich, suggesting that, as well as being fully functional, tbx5 is likely to have been expressed normally in moa since divergence from their flighted ancestors, approximately 60 mya.
The results suggests that, as in mice, moa tbx5 is necessary for the induction of forelimbs, but is not sufficient for their outgrowth. Moa Tbx5 may have played an important role in the development of moa's remnant forelimb girdle, and may be required for the formation of this structure. Our results further show that genetic changes affecting genes other than tbx5 must be responsible for the complete loss of forelimbs in moa.</abstract><cop>England</cop><pub>BioMed Central Ltd</pub><pmid>24885927</pmid><doi>10.1186/1471-2148-14-75</doi><tpages>1</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Amino acids Analysis Animals Atrial Natriuretic Factor - genetics Aves Avian Proteins - genetics Avian Proteins - metabolism Biological Evolution Chickens Cloning Colleges & universities Danio rerio Deoxyribonucleic acid Dinornis DNA Fibroblast Growth Factor 10 - genetics Flight, Animal Forelimb - embryology Gene expression Genes Genetic aspects Genomes Humans Mice Mutation New Zealand Palaeognathae - genetics Palaeognathae - physiology Struthioniformes - embryology T-Box Domain Proteins - genetics T-Box Domain Proteins - metabolism |
title | Reconstruction and in vivo analysis of the extinct tbx5 gene from ancient wingless moa (Aves: Dinornithiformes) |
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