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Sequence variation in CYP51A from the Y strain of Trypanosoma cruzi alters its sensitivity to inhibition

•VNI that cures Tulahuen T. cruzi infection was found less potent against strain Y.•Amplification of CYP51 from the Y strain revealed two genes, A and B.•Y-CYP51A has a P355S substitution, which decreases its sensitivity to inhibition.•Weaker drug sensitivity of Y-CYP51A may be due to its elevated f...

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Published in:FEBS letters 2014-11, Vol.588 (21), p.3878-3885
Main Authors: Cherkesova, Tatiana S., Hargrove, Tatiana Y., Vanrell, M. Cristina, Ges, Igor, Usanov, Sergey A., Romano, Patricia S., Lepesheva, Galina I.
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cited_by cdi_FETCH-LOGICAL-c5987-ce5bd50f553e75c180cc15527887dd9d7eafa168186b56d671335ff62b947bb83
cites cdi_FETCH-LOGICAL-c5987-ce5bd50f553e75c180cc15527887dd9d7eafa168186b56d671335ff62b947bb83
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container_title FEBS letters
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creator Cherkesova, Tatiana S.
Hargrove, Tatiana Y.
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Romano, Patricia S.
Lepesheva, Galina I.
description •VNI that cures Tulahuen T. cruzi infection was found less potent against strain Y.•Amplification of CYP51 from the Y strain revealed two genes, A and B.•Y-CYP51A has a P355S substitution, which decreases its sensitivity to inhibition.•Weaker drug sensitivity of Y-CYP51A may be due to its elevated flexibility.•CYP51 structure based VNI modification produces a derivative of higher efficiency. CYP51 (sterol 14α-demethylase) is an efficient target for clinical and agricultural antifungals and an emerging target for treatment of Chagas disease, the infection that is caused by multiple strains of a protozoan pathogen Trypanosoma cruzi. Here, we analyze CYP51A from the Y strain T. cruzi. In this protein, proline 355, a residue highly conserved across the CYP51 family, is replaced with serine. The purified enzyme retains its catalytic activity, yet has been found less susceptible to inhibition. These biochemical data are consistent with cellular experiments, both in insect and human stages of the pathogen. Comparative structural analysis of CYP51 complexes with VNI and two derivatives suggests that broad-spectrum CYP51 inhibitors are likely to be preferable as antichagasic drug candidates.
doi_str_mv 10.1016/j.febslet.2014.08.030
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Cristina ; Ges, Igor ; Usanov, Sergey A. ; Romano, Patricia S. ; Lepesheva, Galina I.</creator><creatorcontrib>Cherkesova, Tatiana S. ; Hargrove, Tatiana Y. ; Vanrell, M. Cristina ; Ges, Igor ; Usanov, Sergey A. ; Romano, Patricia S. ; Lepesheva, Galina I.</creatorcontrib><description>•VNI that cures Tulahuen T. cruzi infection was found less potent against strain Y.•Amplification of CYP51 from the Y strain revealed two genes, A and B.•Y-CYP51A has a P355S substitution, which decreases its sensitivity to inhibition.•Weaker drug sensitivity of Y-CYP51A may be due to its elevated flexibility.•CYP51 structure based VNI modification produces a derivative of higher efficiency. CYP51 (sterol 14α-demethylase) is an efficient target for clinical and agricultural antifungals and an emerging target for treatment of Chagas disease, the infection that is caused by multiple strains of a protozoan pathogen Trypanosoma cruzi. Here, we analyze CYP51A from the Y strain T. cruzi. In this protein, proline 355, a residue highly conserved across the CYP51 family, is replaced with serine. The purified enzyme retains its catalytic activity, yet has been found less susceptible to inhibition. These biochemical data are consistent with cellular experiments, both in insect and human stages of the pathogen. Comparative structural analysis of CYP51 complexes with VNI and two derivatives suggests that broad-spectrum CYP51 inhibitors are likely to be preferable as antichagasic drug candidates.</description><identifier>ISSN: 0014-5793</identifier><identifier>EISSN: 1873-3468</identifier><identifier>DOI: 10.1016/j.febslet.2014.08.030</identifier><identifier>PMID: 25217832</identifier><language>eng</language><publisher>England: Elsevier B.V</publisher><subject>(R)-N-(1-(2,4-dichlorophenyl)-2-(1H-1,2,4-triazol-1-yl)ethyl)-4-(5-phenyl-1,3,4-oxadiazol-2-yl)benzamide ; (R)-N-(1-(2,4-dichlorophenyl)-2-(1H-imidazol-1-yl)ethyl)-4-(5-phenyl-1,3,4-oxadiazol-2-yl)benzamide ; (R)-N-(1-(3,4′-difluorobiphenyl-4-yl)-2-(1H-imidazol-1-yl)ethyl)-4-(5-phenyl-1,3,4-oxadiazol-2-yl)benzamide ; 14-alpha Demethylase Inhibitors - pharmacology ; 14-alpha Demethylase Inhibitors - therapeutic use ; Amino Acid Sequence ; Amino Acid Substitution ; Animals ; antifungal agents ; Biocatalysis ; catalytic activity ; Chagas disease ; Chagas Disease - drug therapy ; Chagas Disease - enzymology ; Conserved Sequence ; CYP ; CYP51 sequence variation ; Cytochrome P-450 Enzyme System - chemistry ; Cytochrome P-450 Enzyme System - genetics ; Cytochrome P-450 Enzyme System - metabolism ; cytochrome P450 gene or protein ; drug concentration that gives half-maximal response in cellular growth reduction ; Drug resistance ; drugs ; EC50 ; GFP ; green fluorescent protein ; Humans ; insects ; Models, Molecular ; Molecular Sequence Data ; pathogens ; proline ; Protein Conformation ; sequence diversity ; serine ; SRS ; Sterol 14α-demethylase ; Structure-based drug design ; substrate recognition site ; T. cruzi ; trypanocides ; Trypanosoma cruzi ; Trypanosoma cruzi - drug effects ; Trypanosoma cruzi - enzymology ; VFV ; VNI ; VNT</subject><ispartof>FEBS letters, 2014-11, Vol.588 (21), p.3878-3885</ispartof><rights>2014 Federation of European Biochemical Societies</rights><rights>FEBS Letters 588 (2014) 1873-3468 © 2015 Federation of European Biochemical Societies</rights><rights>Copyright © 2014 Federation of European Biochemical Societies. Published by Elsevier B.V. All rights reserved.</rights><rights>2014 Elsevier B.V. on behalf of the Federation of European Biochemical Societies. All rights reserved. 2014</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c5987-ce5bd50f553e75c180cc15527887dd9d7eafa168186b56d671335ff62b947bb83</citedby><cites>FETCH-LOGICAL-c5987-ce5bd50f553e75c180cc15527887dd9d7eafa168186b56d671335ff62b947bb83</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.sciencedirect.com/science/article/pii/S0014579314006577$$EHTML$$P50$$Gelsevier$$Hfree_for_read</linktohtml><link.rule.ids>230,314,776,780,881,3536,27901,27902,45756</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/25217832$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Cherkesova, Tatiana S.</creatorcontrib><creatorcontrib>Hargrove, Tatiana Y.</creatorcontrib><creatorcontrib>Vanrell, M. Cristina</creatorcontrib><creatorcontrib>Ges, Igor</creatorcontrib><creatorcontrib>Usanov, Sergey A.</creatorcontrib><creatorcontrib>Romano, Patricia S.</creatorcontrib><creatorcontrib>Lepesheva, Galina I.</creatorcontrib><title>Sequence variation in CYP51A from the Y strain of Trypanosoma cruzi alters its sensitivity to inhibition</title><title>FEBS letters</title><addtitle>FEBS Lett</addtitle><description>•VNI that cures Tulahuen T. cruzi infection was found less potent against strain Y.•Amplification of CYP51 from the Y strain revealed two genes, A and B.•Y-CYP51A has a P355S substitution, which decreases its sensitivity to inhibition.•Weaker drug sensitivity of Y-CYP51A may be due to its elevated flexibility.•CYP51 structure based VNI modification produces a derivative of higher efficiency. CYP51 (sterol 14α-demethylase) is an efficient target for clinical and agricultural antifungals and an emerging target for treatment of Chagas disease, the infection that is caused by multiple strains of a protozoan pathogen Trypanosoma cruzi. Here, we analyze CYP51A from the Y strain T. cruzi. In this protein, proline 355, a residue highly conserved across the CYP51 family, is replaced with serine. The purified enzyme retains its catalytic activity, yet has been found less susceptible to inhibition. These biochemical data are consistent with cellular experiments, both in insect and human stages of the pathogen. Comparative structural analysis of CYP51 complexes with VNI and two derivatives suggests that broad-spectrum CYP51 inhibitors are likely to be preferable as antichagasic drug candidates.</description><subject>(R)-N-(1-(2,4-dichlorophenyl)-2-(1H-1,2,4-triazol-1-yl)ethyl)-4-(5-phenyl-1,3,4-oxadiazol-2-yl)benzamide</subject><subject>(R)-N-(1-(2,4-dichlorophenyl)-2-(1H-imidazol-1-yl)ethyl)-4-(5-phenyl-1,3,4-oxadiazol-2-yl)benzamide</subject><subject>(R)-N-(1-(3,4′-difluorobiphenyl-4-yl)-2-(1H-imidazol-1-yl)ethyl)-4-(5-phenyl-1,3,4-oxadiazol-2-yl)benzamide</subject><subject>14-alpha Demethylase Inhibitors - pharmacology</subject><subject>14-alpha Demethylase Inhibitors - therapeutic use</subject><subject>Amino Acid Sequence</subject><subject>Amino Acid Substitution</subject><subject>Animals</subject><subject>antifungal agents</subject><subject>Biocatalysis</subject><subject>catalytic activity</subject><subject>Chagas disease</subject><subject>Chagas Disease - drug therapy</subject><subject>Chagas Disease - enzymology</subject><subject>Conserved Sequence</subject><subject>CYP</subject><subject>CYP51 sequence variation</subject><subject>Cytochrome P-450 Enzyme System - chemistry</subject><subject>Cytochrome P-450 Enzyme System - genetics</subject><subject>Cytochrome P-450 Enzyme System - metabolism</subject><subject>cytochrome P450 gene or protein</subject><subject>drug concentration that gives half-maximal response in cellular growth reduction</subject><subject>Drug resistance</subject><subject>drugs</subject><subject>EC50</subject><subject>GFP</subject><subject>green fluorescent protein</subject><subject>Humans</subject><subject>insects</subject><subject>Models, Molecular</subject><subject>Molecular Sequence Data</subject><subject>pathogens</subject><subject>proline</subject><subject>Protein Conformation</subject><subject>sequence diversity</subject><subject>serine</subject><subject>SRS</subject><subject>Sterol 14α-demethylase</subject><subject>Structure-based drug design</subject><subject>substrate recognition site</subject><subject>T. cruzi</subject><subject>trypanocides</subject><subject>Trypanosoma cruzi</subject><subject>Trypanosoma cruzi - drug effects</subject><subject>Trypanosoma cruzi - enzymology</subject><subject>VFV</subject><subject>VNI</subject><subject>VNT</subject><issn>0014-5793</issn><issn>1873-3468</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2014</creationdate><recordtype>article</recordtype><recordid>eNqNkk9v1DAQxS0EokvLRwD5yCXBjuM_uYDKqqVIlajUcujJcpwJ61USL7Z30fLpcbRL1Z7KybLmzU8z7w1C7ygpKaHi47rsoY0DpLIitC6JKgkjL9CCKskKVgv1Ei1IrhRcNuwEvYlxTfJf0eY1Oql4RaVi1QKtbuHXFiYLeGeCM8n5CbsJL-9vOD3HffAjTivA9zimYHLB9_gu7Ddm8tGPBtuw_eOwGRKEiF2KOMIUXXI7l_Y4-YxaudbN1DP0qjdDhLfH9xT9uLy4W14V19-_flueXxeWN0oWFnjbcdJzzkBySxWxlnJeSaVk1zWdBNMbKhRVouWiE5IyxvteVG1Ty7ZV7BR9OnA323aEzsKUBx_0JrjRhL32xumnlcmt9E-_03U2hasZ8OEICD5bE5MeXbQwDGYCv426mm1sBBXkWSkVvBayZqrOUn6Q2uBjDNA_TESJngPVa30MVM-BaqJ0DjT3vX-8zkPXvwSz4Oog-O0G2P8fVV9efKlu5-uYj4PWhAguZUZ9PqAg57NzEHS0br6NzgWwSXfePTPtX67nyyg</recordid><startdate>20141103</startdate><enddate>20141103</enddate><creator>Cherkesova, Tatiana S.</creator><creator>Hargrove, Tatiana Y.</creator><creator>Vanrell, M. 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Cristina</au><au>Ges, Igor</au><au>Usanov, Sergey A.</au><au>Romano, Patricia S.</au><au>Lepesheva, Galina I.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Sequence variation in CYP51A from the Y strain of Trypanosoma cruzi alters its sensitivity to inhibition</atitle><jtitle>FEBS letters</jtitle><addtitle>FEBS Lett</addtitle><date>2014-11-03</date><risdate>2014</risdate><volume>588</volume><issue>21</issue><spage>3878</spage><epage>3885</epage><pages>3878-3885</pages><issn>0014-5793</issn><eissn>1873-3468</eissn><abstract>•VNI that cures Tulahuen T. cruzi infection was found less potent against strain Y.•Amplification of CYP51 from the Y strain revealed two genes, A and B.•Y-CYP51A has a P355S substitution, which decreases its sensitivity to inhibition.•Weaker drug sensitivity of Y-CYP51A may be due to its elevated flexibility.•CYP51 structure based VNI modification produces a derivative of higher efficiency. CYP51 (sterol 14α-demethylase) is an efficient target for clinical and agricultural antifungals and an emerging target for treatment of Chagas disease, the infection that is caused by multiple strains of a protozoan pathogen Trypanosoma cruzi. Here, we analyze CYP51A from the Y strain T. cruzi. In this protein, proline 355, a residue highly conserved across the CYP51 family, is replaced with serine. The purified enzyme retains its catalytic activity, yet has been found less susceptible to inhibition. These biochemical data are consistent with cellular experiments, both in insect and human stages of the pathogen. Comparative structural analysis of CYP51 complexes with VNI and two derivatives suggests that broad-spectrum CYP51 inhibitors are likely to be preferable as antichagasic drug candidates.</abstract><cop>England</cop><pub>Elsevier B.V</pub><pmid>25217832</pmid><doi>10.1016/j.febslet.2014.08.030</doi><tpages>8</tpages><oa>free_for_read</oa></addata></record>
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ispartof FEBS letters, 2014-11, Vol.588 (21), p.3878-3885
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subjects (R)-N-(1-(2,4-dichlorophenyl)-2-(1H-1,2,4-triazol-1-yl)ethyl)-4-(5-phenyl-1,3,4-oxadiazol-2-yl)benzamide
(R)-N-(1-(2,4-dichlorophenyl)-2-(1H-imidazol-1-yl)ethyl)-4-(5-phenyl-1,3,4-oxadiazol-2-yl)benzamide
(R)-N-(1-(3,4′-difluorobiphenyl-4-yl)-2-(1H-imidazol-1-yl)ethyl)-4-(5-phenyl-1,3,4-oxadiazol-2-yl)benzamide
14-alpha Demethylase Inhibitors - pharmacology
14-alpha Demethylase Inhibitors - therapeutic use
Amino Acid Sequence
Amino Acid Substitution
Animals
antifungal agents
Biocatalysis
catalytic activity
Chagas disease
Chagas Disease - drug therapy
Chagas Disease - enzymology
Conserved Sequence
CYP
CYP51 sequence variation
Cytochrome P-450 Enzyme System - chemistry
Cytochrome P-450 Enzyme System - genetics
Cytochrome P-450 Enzyme System - metabolism
cytochrome P450 gene or protein
drug concentration that gives half-maximal response in cellular growth reduction
Drug resistance
drugs
EC50
GFP
green fluorescent protein
Humans
insects
Models, Molecular
Molecular Sequence Data
pathogens
proline
Protein Conformation
sequence diversity
serine
SRS
Sterol 14α-demethylase
Structure-based drug design
substrate recognition site
T. cruzi
trypanocides
Trypanosoma cruzi
Trypanosoma cruzi - drug effects
Trypanosoma cruzi - enzymology
VFV
VNI
VNT
title Sequence variation in CYP51A from the Y strain of Trypanosoma cruzi alters its sensitivity to inhibition
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