Loading…

Weighted brain networks in disease: centrality and entropy in HIV and aging

Graph theory models can produce simple, biologically informative metrics of the topology of resting-state functional connectivity (FC) networks. However, typical graph theory approaches model FC relationships between regions (nodes) as unweighted edges, complicating their interpretability in studies...

Full description

Saved in:
Bibliographic Details
Published in:Neurobiology of aging 2014-06, Vol.36 (1), p.401-412
Main Authors: Thomas, Jewell B., Brier, Matthew R., Ortega, Mario, Benzinger, Tammie L., Ances, Beau M.
Format: Article
Language:English
Online Access:Get full text
Tags: Add Tag
No Tags, Be the first to tag this record!
cited_by
cites
container_end_page 412
container_issue 1
container_start_page 401
container_title Neurobiology of aging
container_volume 36
creator Thomas, Jewell B.
Brier, Matthew R.
Ortega, Mario
Benzinger, Tammie L.
Ances, Beau M.
description Graph theory models can produce simple, biologically informative metrics of the topology of resting-state functional connectivity (FC) networks. However, typical graph theory approaches model FC relationships between regions (nodes) as unweighted edges, complicating their interpretability in studies of disease or aging. We extended existing techniques and constructed fully-connected weighted graphs for groups of age-matched HIV positive (n=67) and HIV negative (n=77) individuals. We compared test-retest reliability of weighted vs. unweighted metrics in an independent study of healthy individuals (n=22) and found weighted measures to be more stable. We quantified two measures of node centrality (closeness centrality and eigenvector centrality) to capture the relative importance of individual nodes. We also quantified one measure of graph entropy (diversity) to measure the variability in connection strength (edge weights) at each node. HIV was primarily associated with differences in measures of centrality, and age was primarily associated with differences in diversity. HIV and age were associated with divergent measures when evaluated at the whole-graph level, within individual functional networks, and at the level of individual nodes. Graph models may allow us to distinguish previously indistinguishable effects related to HIV and age on FC.
doi_str_mv 10.1016/j.neurobiolaging.2014.06.019
format article
fullrecord <record><control><sourceid>pubmedcentral</sourceid><recordid>TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_4268260</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>pubmedcentral_primary_oai_pubmedcentral_nih_gov_4268260</sourcerecordid><originalsourceid>FETCH-pubmedcentral_primary_oai_pubmedcentral_nih_gov_42682603</originalsourceid><addsrcrecordid>eNqljjFPwzAQhS0EoinlP3hgjTmnjpMysCBQUdeqjJZDrumV1I7sFJR_T1p1YUY33HvfPT0dYw8ShASpH_fC4TH4inxrG3KNyEAqAVqAXFyxROZ5mUq1KK5ZMpIiVXkJEzaNcQ8AhSr0LZtkOczVOAlbfSA1ux5rXgVLjjvsf3z4inzUNUW0EZ_4J7o-2Jb6gVtX85Pz3XCKLN83Z3T-ZMZutraNeH_Zd-z57XX9sky7Y3XA-tJiukAHGwbjLZm_F0c70_hvozJdZhrm_y74BQlBYUA</addsrcrecordid><sourcetype>Open Access Repository</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype></control><display><type>article</type><title>Weighted brain networks in disease: centrality and entropy in HIV and aging</title><source>ScienceDirect Freedom Collection</source><creator>Thomas, Jewell B. ; Brier, Matthew R. ; Ortega, Mario ; Benzinger, Tammie L. ; Ances, Beau M.</creator><creatorcontrib>Thomas, Jewell B. ; Brier, Matthew R. ; Ortega, Mario ; Benzinger, Tammie L. ; Ances, Beau M.</creatorcontrib><description>Graph theory models can produce simple, biologically informative metrics of the topology of resting-state functional connectivity (FC) networks. However, typical graph theory approaches model FC relationships between regions (nodes) as unweighted edges, complicating their interpretability in studies of disease or aging. We extended existing techniques and constructed fully-connected weighted graphs for groups of age-matched HIV positive (n=67) and HIV negative (n=77) individuals. We compared test-retest reliability of weighted vs. unweighted metrics in an independent study of healthy individuals (n=22) and found weighted measures to be more stable. We quantified two measures of node centrality (closeness centrality and eigenvector centrality) to capture the relative importance of individual nodes. We also quantified one measure of graph entropy (diversity) to measure the variability in connection strength (edge weights) at each node. HIV was primarily associated with differences in measures of centrality, and age was primarily associated with differences in diversity. HIV and age were associated with divergent measures when evaluated at the whole-graph level, within individual functional networks, and at the level of individual nodes. Graph models may allow us to distinguish previously indistinguishable effects related to HIV and age on FC.</description><identifier>ISSN: 0197-4580</identifier><identifier>EISSN: 1558-1497</identifier><identifier>DOI: 10.1016/j.neurobiolaging.2014.06.019</identifier><identifier>PMID: 25034343</identifier><language>eng</language><ispartof>Neurobiology of aging, 2014-06, Vol.36 (1), p.401-412</ispartof><rights>2014 Elsevier Inc. All rights reserved. 2014</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>230,314,780,784,885,27924,27925</link.rule.ids></links><search><creatorcontrib>Thomas, Jewell B.</creatorcontrib><creatorcontrib>Brier, Matthew R.</creatorcontrib><creatorcontrib>Ortega, Mario</creatorcontrib><creatorcontrib>Benzinger, Tammie L.</creatorcontrib><creatorcontrib>Ances, Beau M.</creatorcontrib><title>Weighted brain networks in disease: centrality and entropy in HIV and aging</title><title>Neurobiology of aging</title><description>Graph theory models can produce simple, biologically informative metrics of the topology of resting-state functional connectivity (FC) networks. However, typical graph theory approaches model FC relationships between regions (nodes) as unweighted edges, complicating their interpretability in studies of disease or aging. We extended existing techniques and constructed fully-connected weighted graphs for groups of age-matched HIV positive (n=67) and HIV negative (n=77) individuals. We compared test-retest reliability of weighted vs. unweighted metrics in an independent study of healthy individuals (n=22) and found weighted measures to be more stable. We quantified two measures of node centrality (closeness centrality and eigenvector centrality) to capture the relative importance of individual nodes. We also quantified one measure of graph entropy (diversity) to measure the variability in connection strength (edge weights) at each node. HIV was primarily associated with differences in measures of centrality, and age was primarily associated with differences in diversity. HIV and age were associated with divergent measures when evaluated at the whole-graph level, within individual functional networks, and at the level of individual nodes. Graph models may allow us to distinguish previously indistinguishable effects related to HIV and age on FC.</description><issn>0197-4580</issn><issn>1558-1497</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2014</creationdate><recordtype>article</recordtype><recordid>eNqljjFPwzAQhS0EoinlP3hgjTmnjpMysCBQUdeqjJZDrumV1I7sFJR_T1p1YUY33HvfPT0dYw8ShASpH_fC4TH4inxrG3KNyEAqAVqAXFyxROZ5mUq1KK5ZMpIiVXkJEzaNcQ8AhSr0LZtkOczVOAlbfSA1ux5rXgVLjjvsf3z4inzUNUW0EZ_4J7o-2Jb6gVtX85Pz3XCKLN83Z3T-ZMZutraNeH_Zd-z57XX9sky7Y3XA-tJiukAHGwbjLZm_F0c70_hvozJdZhrm_y74BQlBYUA</recordid><startdate>20140621</startdate><enddate>20140621</enddate><creator>Thomas, Jewell B.</creator><creator>Brier, Matthew R.</creator><creator>Ortega, Mario</creator><creator>Benzinger, Tammie L.</creator><creator>Ances, Beau M.</creator><scope>5PM</scope></search><sort><creationdate>20140621</creationdate><title>Weighted brain networks in disease: centrality and entropy in HIV and aging</title><author>Thomas, Jewell B. ; Brier, Matthew R. ; Ortega, Mario ; Benzinger, Tammie L. ; Ances, Beau M.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-pubmedcentral_primary_oai_pubmedcentral_nih_gov_42682603</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2014</creationdate><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Thomas, Jewell B.</creatorcontrib><creatorcontrib>Brier, Matthew R.</creatorcontrib><creatorcontrib>Ortega, Mario</creatorcontrib><creatorcontrib>Benzinger, Tammie L.</creatorcontrib><creatorcontrib>Ances, Beau M.</creatorcontrib><collection>PubMed Central (Full Participant titles)</collection><jtitle>Neurobiology of aging</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Thomas, Jewell B.</au><au>Brier, Matthew R.</au><au>Ortega, Mario</au><au>Benzinger, Tammie L.</au><au>Ances, Beau M.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Weighted brain networks in disease: centrality and entropy in HIV and aging</atitle><jtitle>Neurobiology of aging</jtitle><date>2014-06-21</date><risdate>2014</risdate><volume>36</volume><issue>1</issue><spage>401</spage><epage>412</epage><pages>401-412</pages><issn>0197-4580</issn><eissn>1558-1497</eissn><abstract>Graph theory models can produce simple, biologically informative metrics of the topology of resting-state functional connectivity (FC) networks. However, typical graph theory approaches model FC relationships between regions (nodes) as unweighted edges, complicating their interpretability in studies of disease or aging. We extended existing techniques and constructed fully-connected weighted graphs for groups of age-matched HIV positive (n=67) and HIV negative (n=77) individuals. We compared test-retest reliability of weighted vs. unweighted metrics in an independent study of healthy individuals (n=22) and found weighted measures to be more stable. We quantified two measures of node centrality (closeness centrality and eigenvector centrality) to capture the relative importance of individual nodes. We also quantified one measure of graph entropy (diversity) to measure the variability in connection strength (edge weights) at each node. HIV was primarily associated with differences in measures of centrality, and age was primarily associated with differences in diversity. HIV and age were associated with divergent measures when evaluated at the whole-graph level, within individual functional networks, and at the level of individual nodes. Graph models may allow us to distinguish previously indistinguishable effects related to HIV and age on FC.</abstract><pmid>25034343</pmid><doi>10.1016/j.neurobiolaging.2014.06.019</doi></addata></record>
fulltext fulltext
identifier ISSN: 0197-4580
ispartof Neurobiology of aging, 2014-06, Vol.36 (1), p.401-412
issn 0197-4580
1558-1497
language eng
recordid cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_4268260
source ScienceDirect Freedom Collection
title Weighted brain networks in disease: centrality and entropy in HIV and aging
url http://sfxeu10.hosted.exlibrisgroup.com/loughborough?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-07T23%3A26%3A27IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-pubmedcentral&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Weighted%20brain%20networks%20in%20disease:%20centrality%20and%20entropy%20in%20HIV%20and%20aging&rft.jtitle=Neurobiology%20of%20aging&rft.au=Thomas,%20Jewell%20B.&rft.date=2014-06-21&rft.volume=36&rft.issue=1&rft.spage=401&rft.epage=412&rft.pages=401-412&rft.issn=0197-4580&rft.eissn=1558-1497&rft_id=info:doi/10.1016/j.neurobiolaging.2014.06.019&rft_dat=%3Cpubmedcentral%3Epubmedcentral_primary_oai_pubmedcentral_nih_gov_4268260%3C/pubmedcentral%3E%3Cgrp_id%3Ecdi_FETCH-pubmedcentral_primary_oai_pubmedcentral_nih_gov_42682603%3C/grp_id%3E%3Coa%3E%3C/oa%3E%3Curl%3E%3C/url%3E&rft_id=info:oai/&rft_id=info:pmid/25034343&rfr_iscdi=true