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Similar frequencies of Pseudomonas aeruginosa isolates producing KPC and VIM carbapenemases in diverse genetic clones at tertiary-care hospitals in Medellín, Colombia
Carbapenem-resistant Pseudomonas aeruginosa has become a serious health threat worldwide due to the limited options available for its treatment. Understanding its epidemiology contributes to the control of antibiotic resistance. The aim of this study was to describe the clinical and molecular charac...
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Published in: | Journal of clinical microbiology 2014-11, Vol.52 (11), p.3978-3986 |
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creator | Vanegas, Johanna M Cienfuegos, Astrid V Ocampo, Ana M López, Lucelly del Corral, Helena Roncancio, Gustavo Sierra, Patricia Echeverri-Toro, Lina Ospina, Sigifredo Maldonado, Natalia Robledo, Carlos Restrepo, Andrea Jiménez, J Natalia |
description | Carbapenem-resistant Pseudomonas aeruginosa has become a serious health threat worldwide due to the limited options available for its treatment. Understanding its epidemiology contributes to the control of antibiotic resistance. The aim of this study was to describe the clinical and molecular characteristics of infections caused by carbapenem-resistant P. aeruginosa isolates in five tertiary-care hospitals in Medellín, Colombia. A cross-sectional study was conducted in five tertiary-care hospitals from June 2012 to March 2014. All hospitalized patients infected by carbapenem-resistant P. aeruginosa were included. Clinical information was obtained from medical records. Molecular analyses included PCR for detection of bla(VIM), bla(IMP), bla(NDM), bla(OXA-48), and bla(KPC) genes plus pulsed-field gel electrophoresis (PFGE) and multilocus sequence typing (MLST) for molecular typing. A total of 235 patients were enrolled: 91.1% of them were adults (n = 214), 88.1% (n = 207) had prior antibiotic use, and 14.9% (n = 35) had urinary tract infections. The bla(VIM-2) and bla(KPC-2) genes were detected in 13.6% (n = 32) and 11.5% (n = 27), respectively, of all isolates. Two isolates harbored both genes simultaneously. For KPC-producing isolates, PFGE revealed closely related strains within each hospital, and sequence types (STs) ST362 and ST235 and two new STs were found by MLST. With PFGE, VIM-producing isolates appeared highly diverse, and MLST revealed ST111 in four hospitals and five new STs. These results show that KPC-producing P. aeruginosa is currently disseminating rapidly and occurring at a frequency similar to that of VIM-producing P. aeruginosa isolates (approximately 1:1 ratio) in Medellín, Colombia. Diverse genetic backgrounds among resistant strains suggest an excessive antibiotic pressure resulting in the selection of resistant strains. |
doi_str_mv | 10.1128/JCM.01879-14 |
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C.</contributor><creatorcontrib>Vanegas, Johanna M ; Cienfuegos, Astrid V ; Ocampo, Ana M ; López, Lucelly ; del Corral, Helena ; Roncancio, Gustavo ; Sierra, Patricia ; Echeverri-Toro, Lina ; Ospina, Sigifredo ; Maldonado, Natalia ; Robledo, Carlos ; Restrepo, Andrea ; Jiménez, J Natalia ; Carroll, K. C.</creatorcontrib><description>Carbapenem-resistant Pseudomonas aeruginosa has become a serious health threat worldwide due to the limited options available for its treatment. Understanding its epidemiology contributes to the control of antibiotic resistance. The aim of this study was to describe the clinical and molecular characteristics of infections caused by carbapenem-resistant P. aeruginosa isolates in five tertiary-care hospitals in Medellín, Colombia. A cross-sectional study was conducted in five tertiary-care hospitals from June 2012 to March 2014. All hospitalized patients infected by carbapenem-resistant P. aeruginosa were included. Clinical information was obtained from medical records. Molecular analyses included PCR for detection of bla(VIM), bla(IMP), bla(NDM), bla(OXA-48), and bla(KPC) genes plus pulsed-field gel electrophoresis (PFGE) and multilocus sequence typing (MLST) for molecular typing. A total of 235 patients were enrolled: 91.1% of them were adults (n = 214), 88.1% (n = 207) had prior antibiotic use, and 14.9% (n = 35) had urinary tract infections. The bla(VIM-2) and bla(KPC-2) genes were detected in 13.6% (n = 32) and 11.5% (n = 27), respectively, of all isolates. Two isolates harbored both genes simultaneously. For KPC-producing isolates, PFGE revealed closely related strains within each hospital, and sequence types (STs) ST362 and ST235 and two new STs were found by MLST. With PFGE, VIM-producing isolates appeared highly diverse, and MLST revealed ST111 in four hospitals and five new STs. These results show that KPC-producing P. aeruginosa is currently disseminating rapidly and occurring at a frequency similar to that of VIM-producing P. aeruginosa isolates (approximately 1:1 ratio) in Medellín, Colombia. Diverse genetic backgrounds among resistant strains suggest an excessive antibiotic pressure resulting in the selection of resistant strains.</description><identifier>ISSN: 0095-1137</identifier><identifier>EISSN: 1098-660X</identifier><identifier>DOI: 10.1128/JCM.01879-14</identifier><identifier>PMID: 25210071</identifier><language>eng</language><publisher>United States: American Society for Microbiology</publisher><subject>Adolescent ; Adult ; Aged ; Aged, 80 and over ; Bacterial Proteins - genetics ; Bacterial Proteins - secretion ; beta-Lactamases - genetics ; beta-Lactamases - secretion ; Child ; Cluster Analysis ; Colombia - epidemiology ; Cross Infection - epidemiology ; Cross Infection - microbiology ; Cross Infection - pathology ; Cross Infection - transmission ; Cross-Sectional Studies ; DNA, Bacterial - chemistry ; DNA, Bacterial - genetics ; Electrophoresis, Gel, Pulsed-Field ; Epidemiology ; Female ; Genotype ; Humans ; Male ; Middle Aged ; Molecular Epidemiology ; Multilocus Sequence Typing ; Polymerase Chain Reaction ; Pseudomonas aeruginosa ; Pseudomonas aeruginosa - classification ; Pseudomonas aeruginosa - enzymology ; Pseudomonas aeruginosa - genetics ; Pseudomonas aeruginosa - isolation & purification ; Pseudomonas Infections - epidemiology ; Pseudomonas Infections - microbiology ; Pseudomonas Infections - pathology ; Pseudomonas Infections - transmission ; Tertiary Care Centers ; Young Adult</subject><ispartof>Journal of clinical microbiology, 2014-11, Vol.52 (11), p.3978-3986</ispartof><rights>Copyright © 2014, American Society for Microbiology. All Rights Reserved.</rights><rights>Copyright © 2014, American Society for Microbiology. All Rights Reserved. 2014 American Society for Microbiology</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c417t-6a27e723b69d63b153d2ccf8db9177e90e31bc614a9f47d41841ae6929ebc0573</citedby><cites>FETCH-LOGICAL-c417t-6a27e723b69d63b153d2ccf8db9177e90e31bc614a9f47d41841ae6929ebc0573</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4313234/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4313234/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,727,780,784,885,3188,27924,27925,53791,53793</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/25210071$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><contributor>Carroll, K. C.</contributor><creatorcontrib>Vanegas, Johanna M</creatorcontrib><creatorcontrib>Cienfuegos, Astrid V</creatorcontrib><creatorcontrib>Ocampo, Ana M</creatorcontrib><creatorcontrib>López, Lucelly</creatorcontrib><creatorcontrib>del Corral, Helena</creatorcontrib><creatorcontrib>Roncancio, Gustavo</creatorcontrib><creatorcontrib>Sierra, Patricia</creatorcontrib><creatorcontrib>Echeverri-Toro, Lina</creatorcontrib><creatorcontrib>Ospina, Sigifredo</creatorcontrib><creatorcontrib>Maldonado, Natalia</creatorcontrib><creatorcontrib>Robledo, Carlos</creatorcontrib><creatorcontrib>Restrepo, Andrea</creatorcontrib><creatorcontrib>Jiménez, J Natalia</creatorcontrib><title>Similar frequencies of Pseudomonas aeruginosa isolates producing KPC and VIM carbapenemases in diverse genetic clones at tertiary-care hospitals in Medellín, Colombia</title><title>Journal of clinical microbiology</title><addtitle>J Clin Microbiol</addtitle><description>Carbapenem-resistant Pseudomonas aeruginosa has become a serious health threat worldwide due to the limited options available for its treatment. Understanding its epidemiology contributes to the control of antibiotic resistance. The aim of this study was to describe the clinical and molecular characteristics of infections caused by carbapenem-resistant P. aeruginosa isolates in five tertiary-care hospitals in Medellín, Colombia. A cross-sectional study was conducted in five tertiary-care hospitals from June 2012 to March 2014. All hospitalized patients infected by carbapenem-resistant P. aeruginosa were included. Clinical information was obtained from medical records. Molecular analyses included PCR for detection of bla(VIM), bla(IMP), bla(NDM), bla(OXA-48), and bla(KPC) genes plus pulsed-field gel electrophoresis (PFGE) and multilocus sequence typing (MLST) for molecular typing. A total of 235 patients were enrolled: 91.1% of them were adults (n = 214), 88.1% (n = 207) had prior antibiotic use, and 14.9% (n = 35) had urinary tract infections. The bla(VIM-2) and bla(KPC-2) genes were detected in 13.6% (n = 32) and 11.5% (n = 27), respectively, of all isolates. Two isolates harbored both genes simultaneously. For KPC-producing isolates, PFGE revealed closely related strains within each hospital, and sequence types (STs) ST362 and ST235 and two new STs were found by MLST. With PFGE, VIM-producing isolates appeared highly diverse, and MLST revealed ST111 in four hospitals and five new STs. These results show that KPC-producing P. aeruginosa is currently disseminating rapidly and occurring at a frequency similar to that of VIM-producing P. aeruginosa isolates (approximately 1:1 ratio) in Medellín, Colombia. Diverse genetic backgrounds among resistant strains suggest an excessive antibiotic pressure resulting in the selection of resistant strains.</description><subject>Adolescent</subject><subject>Adult</subject><subject>Aged</subject><subject>Aged, 80 and over</subject><subject>Bacterial Proteins - genetics</subject><subject>Bacterial Proteins - secretion</subject><subject>beta-Lactamases - genetics</subject><subject>beta-Lactamases - secretion</subject><subject>Child</subject><subject>Cluster Analysis</subject><subject>Colombia - epidemiology</subject><subject>Cross Infection - epidemiology</subject><subject>Cross Infection - microbiology</subject><subject>Cross Infection - pathology</subject><subject>Cross Infection - transmission</subject><subject>Cross-Sectional Studies</subject><subject>DNA, Bacterial - chemistry</subject><subject>DNA, Bacterial - genetics</subject><subject>Electrophoresis, Gel, Pulsed-Field</subject><subject>Epidemiology</subject><subject>Female</subject><subject>Genotype</subject><subject>Humans</subject><subject>Male</subject><subject>Middle Aged</subject><subject>Molecular Epidemiology</subject><subject>Multilocus Sequence Typing</subject><subject>Polymerase Chain Reaction</subject><subject>Pseudomonas aeruginosa</subject><subject>Pseudomonas aeruginosa - classification</subject><subject>Pseudomonas aeruginosa - enzymology</subject><subject>Pseudomonas aeruginosa - genetics</subject><subject>Pseudomonas aeruginosa - isolation & purification</subject><subject>Pseudomonas Infections - epidemiology</subject><subject>Pseudomonas Infections - microbiology</subject><subject>Pseudomonas Infections - pathology</subject><subject>Pseudomonas Infections - transmission</subject><subject>Tertiary Care Centers</subject><subject>Young Adult</subject><issn>0095-1137</issn><issn>1098-660X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2014</creationdate><recordtype>article</recordtype><recordid>eNqNkstu1TAURSMEopfCjDHykEFTfGwnjidIKOJR6BWVeIiZ5dgnt0aJfbGTSnwRI76CH8N9UMGMkSXvdbb2sXdVPQZ6DMC6Z2_77TGFTqoaxJ1qA1R1ddvSL3erDaWqqQG4PKge5PyVUhCiae5XB6xhQKmETfXjg5_9ZBIZE35bMViPmcSRnGVcXZxjMJkYTOvOh5gN8TlOZinIPkW3Wh925N1ZT0xw5PPJlliTBrPHgLPJBfKBOH-BKSPZlcvFW2KnGIpiFrJgWrxJ3-syhOQ85r1fzHQ1tEWH0_TrZzgifZziPHjzsLo3FhUf3ZyH1adXLz_2b-rT969P-hentRUgl7o1TKJkfGiVa_kADXfM2rFzgwIpUVHkMNgWhFGjkE5AJ8Bgq5jCwdJG8sPq-bXvfh1mdBbDksyk98nPJauOxut_leDP9S5eaMGBMy6KwdMbgxTLg-ZFzz7bso4JGNesoeVKKd7I9j9Q4EpIxpqCHl2jNsWcE463iYDqyxroUgN9VQMNlyGe_L3FLfzn3_lvIKqyLw</recordid><startdate>201411</startdate><enddate>201411</enddate><creator>Vanegas, Johanna M</creator><creator>Cienfuegos, Astrid V</creator><creator>Ocampo, Ana M</creator><creator>López, Lucelly</creator><creator>del Corral, Helena</creator><creator>Roncancio, Gustavo</creator><creator>Sierra, Patricia</creator><creator>Echeverri-Toro, Lina</creator><creator>Ospina, Sigifredo</creator><creator>Maldonado, Natalia</creator><creator>Robledo, Carlos</creator><creator>Restrepo, Andrea</creator><creator>Jiménez, J Natalia</creator><general>American Society for Microbiology</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>7QL</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>P64</scope><scope>RC3</scope><scope>5PM</scope></search><sort><creationdate>201411</creationdate><title>Similar frequencies of Pseudomonas aeruginosa isolates producing KPC and VIM carbapenemases in diverse genetic clones at tertiary-care hospitals in Medellín, Colombia</title><author>Vanegas, Johanna M ; Cienfuegos, Astrid V ; Ocampo, Ana M ; López, Lucelly ; del Corral, Helena ; Roncancio, Gustavo ; Sierra, Patricia ; Echeverri-Toro, Lina ; Ospina, Sigifredo ; Maldonado, Natalia ; Robledo, Carlos ; Restrepo, Andrea ; Jiménez, J Natalia</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c417t-6a27e723b69d63b153d2ccf8db9177e90e31bc614a9f47d41841ae6929ebc0573</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2014</creationdate><topic>Adolescent</topic><topic>Adult</topic><topic>Aged</topic><topic>Aged, 80 and over</topic><topic>Bacterial Proteins - genetics</topic><topic>Bacterial Proteins - secretion</topic><topic>beta-Lactamases - genetics</topic><topic>beta-Lactamases - secretion</topic><topic>Child</topic><topic>Cluster Analysis</topic><topic>Colombia - epidemiology</topic><topic>Cross Infection - epidemiology</topic><topic>Cross Infection - microbiology</topic><topic>Cross Infection - pathology</topic><topic>Cross Infection - transmission</topic><topic>Cross-Sectional Studies</topic><topic>DNA, Bacterial - chemistry</topic><topic>DNA, Bacterial - genetics</topic><topic>Electrophoresis, Gel, Pulsed-Field</topic><topic>Epidemiology</topic><topic>Female</topic><topic>Genotype</topic><topic>Humans</topic><topic>Male</topic><topic>Middle Aged</topic><topic>Molecular Epidemiology</topic><topic>Multilocus Sequence Typing</topic><topic>Polymerase Chain Reaction</topic><topic>Pseudomonas aeruginosa</topic><topic>Pseudomonas aeruginosa - classification</topic><topic>Pseudomonas aeruginosa - enzymology</topic><topic>Pseudomonas aeruginosa - genetics</topic><topic>Pseudomonas aeruginosa - isolation & purification</topic><topic>Pseudomonas Infections - epidemiology</topic><topic>Pseudomonas Infections - microbiology</topic><topic>Pseudomonas Infections - pathology</topic><topic>Pseudomonas Infections - transmission</topic><topic>Tertiary Care Centers</topic><topic>Young Adult</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Vanegas, Johanna M</creatorcontrib><creatorcontrib>Cienfuegos, Astrid V</creatorcontrib><creatorcontrib>Ocampo, Ana M</creatorcontrib><creatorcontrib>López, Lucelly</creatorcontrib><creatorcontrib>del Corral, Helena</creatorcontrib><creatorcontrib>Roncancio, Gustavo</creatorcontrib><creatorcontrib>Sierra, Patricia</creatorcontrib><creatorcontrib>Echeverri-Toro, Lina</creatorcontrib><creatorcontrib>Ospina, Sigifredo</creatorcontrib><creatorcontrib>Maldonado, Natalia</creatorcontrib><creatorcontrib>Robledo, Carlos</creatorcontrib><creatorcontrib>Restrepo, Andrea</creatorcontrib><creatorcontrib>Jiménez, J Natalia</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Journal of clinical microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Vanegas, Johanna M</au><au>Cienfuegos, Astrid V</au><au>Ocampo, Ana M</au><au>López, Lucelly</au><au>del Corral, Helena</au><au>Roncancio, Gustavo</au><au>Sierra, Patricia</au><au>Echeverri-Toro, Lina</au><au>Ospina, Sigifredo</au><au>Maldonado, Natalia</au><au>Robledo, Carlos</au><au>Restrepo, Andrea</au><au>Jiménez, J Natalia</au><au>Carroll, K. C.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Similar frequencies of Pseudomonas aeruginosa isolates producing KPC and VIM carbapenemases in diverse genetic clones at tertiary-care hospitals in Medellín, Colombia</atitle><jtitle>Journal of clinical microbiology</jtitle><addtitle>J Clin Microbiol</addtitle><date>2014-11</date><risdate>2014</risdate><volume>52</volume><issue>11</issue><spage>3978</spage><epage>3986</epage><pages>3978-3986</pages><issn>0095-1137</issn><eissn>1098-660X</eissn><abstract>Carbapenem-resistant Pseudomonas aeruginosa has become a serious health threat worldwide due to the limited options available for its treatment. Understanding its epidemiology contributes to the control of antibiotic resistance. The aim of this study was to describe the clinical and molecular characteristics of infections caused by carbapenem-resistant P. aeruginosa isolates in five tertiary-care hospitals in Medellín, Colombia. A cross-sectional study was conducted in five tertiary-care hospitals from June 2012 to March 2014. All hospitalized patients infected by carbapenem-resistant P. aeruginosa were included. Clinical information was obtained from medical records. Molecular analyses included PCR for detection of bla(VIM), bla(IMP), bla(NDM), bla(OXA-48), and bla(KPC) genes plus pulsed-field gel electrophoresis (PFGE) and multilocus sequence typing (MLST) for molecular typing. A total of 235 patients were enrolled: 91.1% of them were adults (n = 214), 88.1% (n = 207) had prior antibiotic use, and 14.9% (n = 35) had urinary tract infections. The bla(VIM-2) and bla(KPC-2) genes were detected in 13.6% (n = 32) and 11.5% (n = 27), respectively, of all isolates. Two isolates harbored both genes simultaneously. For KPC-producing isolates, PFGE revealed closely related strains within each hospital, and sequence types (STs) ST362 and ST235 and two new STs were found by MLST. With PFGE, VIM-producing isolates appeared highly diverse, and MLST revealed ST111 in four hospitals and five new STs. These results show that KPC-producing P. aeruginosa is currently disseminating rapidly and occurring at a frequency similar to that of VIM-producing P. aeruginosa isolates (approximately 1:1 ratio) in Medellín, Colombia. Diverse genetic backgrounds among resistant strains suggest an excessive antibiotic pressure resulting in the selection of resistant strains.</abstract><cop>United States</cop><pub>American Society for Microbiology</pub><pmid>25210071</pmid><doi>10.1128/JCM.01879-14</doi><tpages>9</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Adolescent Adult Aged Aged, 80 and over Bacterial Proteins - genetics Bacterial Proteins - secretion beta-Lactamases - genetics beta-Lactamases - secretion Child Cluster Analysis Colombia - epidemiology Cross Infection - epidemiology Cross Infection - microbiology Cross Infection - pathology Cross Infection - transmission Cross-Sectional Studies DNA, Bacterial - chemistry DNA, Bacterial - genetics Electrophoresis, Gel, Pulsed-Field Epidemiology Female Genotype Humans Male Middle Aged Molecular Epidemiology Multilocus Sequence Typing Polymerase Chain Reaction Pseudomonas aeruginosa Pseudomonas aeruginosa - classification Pseudomonas aeruginosa - enzymology Pseudomonas aeruginosa - genetics Pseudomonas aeruginosa - isolation & purification Pseudomonas Infections - epidemiology Pseudomonas Infections - microbiology Pseudomonas Infections - pathology Pseudomonas Infections - transmission Tertiary Care Centers Young Adult |
title | Similar frequencies of Pseudomonas aeruginosa isolates producing KPC and VIM carbapenemases in diverse genetic clones at tertiary-care hospitals in Medellín, Colombia |
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