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Efficient diagnosis and treatment follow-up of human brucellosis by a novel quantitative TaqMan real-time PCR assay: a human clinical survey
Rapid and effective diagnosis of brucellosis is a challenge for clinicians. Even when diagnosis is on time and therapy is initiated, meticulous follow-up appointments are crucial for ensuring the efficacy of the treatment. Due to shortcomings of serological methods, molecular diagnosis, especially r...
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Published in: | Journal of clinical microbiology 2014-12, Vol.52 (12), p.4239-4243 |
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creator | Sohrabi, Majid Mohabati Mobarez, Ashraf Khoramabadi, Nima Hosseini Doust, Reza Behmanesh, Mehrdad |
description | Rapid and effective diagnosis of brucellosis is a challenge for clinicians. Even when diagnosis is on time and therapy is initiated, meticulous follow-up appointments are crucial for ensuring the efficacy of the treatment. Due to shortcomings of serological methods, molecular diagnosis, especially real-time PCR, is becoming a main approach in laboratory diagnostics. Thus, the development of efficient procedures and standardization of the PCR tests will have a great impact on the precise detection and quantification of bacterial DNA loads, which is valuable for the medical management of brucellosis patients. We developed a new TaqMan real-time PCR directed to bcsp31, a shared gene of the brucellae. The bcsp31 gene fragment was cloned into pJET1.2. Recombinant pJET1.2-bcsp31 was linearized by HindIII digestion, and the product was used for the preparation of a standard curve. A panel of Brucella spp. and non-Brucella pathogens was tested. No bacterial genomes other than those of the brucellae were detected. According to the results, specificity of the method was 100%. In a clinical assessment, the positive-control group comprised 37 patients with microbiologically confirmed brucellosis, and 25 healthy individuals served as the negative-control group. By the end of the treatment period, there was a significant decrease in the DNA load of the 37 brucellosis patients, which persisted for the 4 weeks of monitoring after treatment, suggesting that our proposed method is an efficient monitoring tool. Serum samples prior to any treatment were collected from the 25 serologically suspicious patients and assessed by our method; 72% of these patients tested positive for brucellosis. |
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Even when diagnosis is on time and therapy is initiated, meticulous follow-up appointments are crucial for ensuring the efficacy of the treatment. Due to shortcomings of serological methods, molecular diagnosis, especially real-time PCR, is becoming a main approach in laboratory diagnostics. Thus, the development of efficient procedures and standardization of the PCR tests will have a great impact on the precise detection and quantification of bacterial DNA loads, which is valuable for the medical management of brucellosis patients. We developed a new TaqMan real-time PCR directed to bcsp31, a shared gene of the brucellae. The bcsp31 gene fragment was cloned into pJET1.2. Recombinant pJET1.2-bcsp31 was linearized by HindIII digestion, and the product was used for the preparation of a standard curve. A panel of Brucella spp. and non-Brucella pathogens was tested. No bacterial genomes other than those of the brucellae were detected. According to the results, specificity of the method was 100%. In a clinical assessment, the positive-control group comprised 37 patients with microbiologically confirmed brucellosis, and 25 healthy individuals served as the negative-control group. By the end of the treatment period, there was a significant decrease in the DNA load of the 37 brucellosis patients, which persisted for the 4 weeks of monitoring after treatment, suggesting that our proposed method is an efficient monitoring tool. Serum samples prior to any treatment were collected from the 25 serologically suspicious patients and assessed by our method; 72% of these patients tested positive for brucellosis.</description><identifier>ISSN: 0095-1137</identifier><identifier>EISSN: 1098-660X</identifier><identifier>DOI: 10.1128/JCM.01819-14</identifier><identifier>PMID: 25275001</identifier><language>eng</language><publisher>United States: American Society for Microbiology</publisher><subject>Bacterial Load - methods ; Bacteriology ; Brucella ; Brucella - genetics ; Brucella - isolation & purification ; Brucellosis - diagnosis ; Brucellosis - drug therapy ; DNA, Bacterial - analysis ; DNA, Bacterial - genetics ; Drug Monitoring - methods ; Female ; Humans ; Male ; Molecular Diagnostic Techniques - methods ; Real-Time Polymerase Chain Reaction - methods ; Sensitivity and Specificity</subject><ispartof>Journal of clinical microbiology, 2014-12, Vol.52 (12), p.4239-4243</ispartof><rights>Copyright © 2014, American Society for Microbiology. All Rights Reserved.</rights><rights>Copyright © 2014, American Society for Microbiology. All Rights Reserved. 2014 American Society for Microbiology</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c417t-64a078e6dcb52eda1517cbba9131fb635c74de78ac6245a186c31b09e38700c73</citedby><cites>FETCH-LOGICAL-c417t-64a078e6dcb52eda1517cbba9131fb635c74de78ac6245a186c31b09e38700c73</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4313293/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4313293/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,723,776,780,881,3174,27903,27904,53769,53771</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/25275001$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><contributor>Patel, R.</contributor><creatorcontrib>Sohrabi, Majid</creatorcontrib><creatorcontrib>Mohabati Mobarez, Ashraf</creatorcontrib><creatorcontrib>Khoramabadi, Nima</creatorcontrib><creatorcontrib>Hosseini Doust, Reza</creatorcontrib><creatorcontrib>Behmanesh, Mehrdad</creatorcontrib><title>Efficient diagnosis and treatment follow-up of human brucellosis by a novel quantitative TaqMan real-time PCR assay: a human clinical survey</title><title>Journal of clinical microbiology</title><addtitle>J Clin Microbiol</addtitle><description>Rapid and effective diagnosis of brucellosis is a challenge for clinicians. Even when diagnosis is on time and therapy is initiated, meticulous follow-up appointments are crucial for ensuring the efficacy of the treatment. Due to shortcomings of serological methods, molecular diagnosis, especially real-time PCR, is becoming a main approach in laboratory diagnostics. Thus, the development of efficient procedures and standardization of the PCR tests will have a great impact on the precise detection and quantification of bacterial DNA loads, which is valuable for the medical management of brucellosis patients. We developed a new TaqMan real-time PCR directed to bcsp31, a shared gene of the brucellae. The bcsp31 gene fragment was cloned into pJET1.2. Recombinant pJET1.2-bcsp31 was linearized by HindIII digestion, and the product was used for the preparation of a standard curve. A panel of Brucella spp. and non-Brucella pathogens was tested. No bacterial genomes other than those of the brucellae were detected. According to the results, specificity of the method was 100%. In a clinical assessment, the positive-control group comprised 37 patients with microbiologically confirmed brucellosis, and 25 healthy individuals served as the negative-control group. By the end of the treatment period, there was a significant decrease in the DNA load of the 37 brucellosis patients, which persisted for the 4 weeks of monitoring after treatment, suggesting that our proposed method is an efficient monitoring tool. Serum samples prior to any treatment were collected from the 25 serologically suspicious patients and assessed by our method; 72% of these patients tested positive for brucellosis.</description><subject>Bacterial Load - methods</subject><subject>Bacteriology</subject><subject>Brucella</subject><subject>Brucella - genetics</subject><subject>Brucella - isolation & purification</subject><subject>Brucellosis - diagnosis</subject><subject>Brucellosis - drug therapy</subject><subject>DNA, Bacterial - analysis</subject><subject>DNA, Bacterial - genetics</subject><subject>Drug Monitoring - methods</subject><subject>Female</subject><subject>Humans</subject><subject>Male</subject><subject>Molecular Diagnostic Techniques - methods</subject><subject>Real-Time Polymerase Chain Reaction - methods</subject><subject>Sensitivity and Specificity</subject><issn>0095-1137</issn><issn>1098-660X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2014</creationdate><recordtype>article</recordtype><recordid>eNqFkU1v1DAQhi0Eokvhxhn5yIEUT_yVcEBCq_KlViBUJG7WxHFao8TetZNF-x_40XjZUsGJkzXjx4888xLyFNgZQN28_Li-PGPQQFuBuEdWwNqmUop9u09WjLWyAuD6hDzK-TtjIISUD8lJLWstS7kiP8-HwVvvwkx7j9chZp8php7OyeE8HfpDHMf4o1o2NA70Zpkw0C4t1pXuAe72FGmIOzfS7YJh9jPOfufoFW4vC1o0YzX7ydHP6y8Uc8b9q_Lg6LGjD97iSPOSdm7_mDwYcMzuye15Sr6-Pb9av68uPr37sH5zUVkBeq6UQKYbp3rbydr1CBK07TpsgcPQKS6tFr3TDVpVC4nQKMuhY63jjWbMan5KXh-9m6WbXG_LlAlHs0l-wrQ3Eb359yb4G3Mdd0Zw4HXLi-D5rSDF7eLybCafDxvB4OKSDSgpVMt4wf-P1pILJnRT0BdH1KaYc3LD3Y-AmUPWpmRtfmdtQBT82d9T3MF_wuW_ABbOpx8</recordid><startdate>201412</startdate><enddate>201412</enddate><creator>Sohrabi, Majid</creator><creator>Mohabati Mobarez, Ashraf</creator><creator>Khoramabadi, Nima</creator><creator>Hosseini Doust, Reza</creator><creator>Behmanesh, Mehrdad</creator><general>American Society for Microbiology</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>7QL</scope><scope>C1K</scope><scope>5PM</scope></search><sort><creationdate>201412</creationdate><title>Efficient diagnosis and treatment follow-up of human brucellosis by a novel quantitative TaqMan real-time PCR assay: a human clinical survey</title><author>Sohrabi, Majid ; Mohabati Mobarez, Ashraf ; Khoramabadi, Nima ; Hosseini Doust, Reza ; Behmanesh, Mehrdad</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c417t-64a078e6dcb52eda1517cbba9131fb635c74de78ac6245a186c31b09e38700c73</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2014</creationdate><topic>Bacterial Load - methods</topic><topic>Bacteriology</topic><topic>Brucella</topic><topic>Brucella - genetics</topic><topic>Brucella - isolation & purification</topic><topic>Brucellosis - diagnosis</topic><topic>Brucellosis - drug therapy</topic><topic>DNA, Bacterial - analysis</topic><topic>DNA, Bacterial - genetics</topic><topic>Drug Monitoring - methods</topic><topic>Female</topic><topic>Humans</topic><topic>Male</topic><topic>Molecular Diagnostic Techniques - methods</topic><topic>Real-Time Polymerase Chain Reaction - methods</topic><topic>Sensitivity and Specificity</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Sohrabi, Majid</creatorcontrib><creatorcontrib>Mohabati Mobarez, Ashraf</creatorcontrib><creatorcontrib>Khoramabadi, Nima</creatorcontrib><creatorcontrib>Hosseini Doust, Reza</creatorcontrib><creatorcontrib>Behmanesh, Mehrdad</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Environmental Sciences and Pollution Management</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Journal of clinical microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Sohrabi, Majid</au><au>Mohabati Mobarez, Ashraf</au><au>Khoramabadi, Nima</au><au>Hosseini Doust, Reza</au><au>Behmanesh, Mehrdad</au><au>Patel, R.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Efficient diagnosis and treatment follow-up of human brucellosis by a novel quantitative TaqMan real-time PCR assay: a human clinical survey</atitle><jtitle>Journal of clinical microbiology</jtitle><addtitle>J Clin Microbiol</addtitle><date>2014-12</date><risdate>2014</risdate><volume>52</volume><issue>12</issue><spage>4239</spage><epage>4243</epage><pages>4239-4243</pages><issn>0095-1137</issn><eissn>1098-660X</eissn><abstract>Rapid and effective diagnosis of brucellosis is a challenge for clinicians. Even when diagnosis is on time and therapy is initiated, meticulous follow-up appointments are crucial for ensuring the efficacy of the treatment. Due to shortcomings of serological methods, molecular diagnosis, especially real-time PCR, is becoming a main approach in laboratory diagnostics. Thus, the development of efficient procedures and standardization of the PCR tests will have a great impact on the precise detection and quantification of bacterial DNA loads, which is valuable for the medical management of brucellosis patients. We developed a new TaqMan real-time PCR directed to bcsp31, a shared gene of the brucellae. The bcsp31 gene fragment was cloned into pJET1.2. Recombinant pJET1.2-bcsp31 was linearized by HindIII digestion, and the product was used for the preparation of a standard curve. A panel of Brucella spp. and non-Brucella pathogens was tested. No bacterial genomes other than those of the brucellae were detected. According to the results, specificity of the method was 100%. In a clinical assessment, the positive-control group comprised 37 patients with microbiologically confirmed brucellosis, and 25 healthy individuals served as the negative-control group. By the end of the treatment period, there was a significant decrease in the DNA load of the 37 brucellosis patients, which persisted for the 4 weeks of monitoring after treatment, suggesting that our proposed method is an efficient monitoring tool. Serum samples prior to any treatment were collected from the 25 serologically suspicious patients and assessed by our method; 72% of these patients tested positive for brucellosis.</abstract><cop>United States</cop><pub>American Society for Microbiology</pub><pmid>25275001</pmid><doi>10.1128/JCM.01819-14</doi><tpages>5</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Bacterial Load - methods Bacteriology Brucella Brucella - genetics Brucella - isolation & purification Brucellosis - diagnosis Brucellosis - drug therapy DNA, Bacterial - analysis DNA, Bacterial - genetics Drug Monitoring - methods Female Humans Male Molecular Diagnostic Techniques - methods Real-Time Polymerase Chain Reaction - methods Sensitivity and Specificity |
title | Efficient diagnosis and treatment follow-up of human brucellosis by a novel quantitative TaqMan real-time PCR assay: a human clinical survey |
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