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Predicting early brain metastases based on clinicopathological factors and gene expression analysis in advanced HER2-positive breast cancer patients

The overexpression or amplification of the human epidermal growth factor receptor 2 gene ( HER2 / neu ) is associated with high risk of brain metastasis (BM). The identification of patients at highest immediate risk of BM could optimize screening and facilitate interventional trials. We performed ge...

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Published in:Journal of neuro-oncology 2015-03, Vol.122 (1), p.205-216
Main Authors: Duchnowska, Renata, Jassem, Jacek, Goswami, Chirayu Pankaj, Dundar, Murat, Gökmen-Polar, Yesim, Li, Lang, Woditschka, Stephan, Biernat, Wojciech, Sosińska-Mielcarek, Katarzyna, Czartoryska-Arłukowicz, Bogumiła, Radecka, Barbara, Tomasevic, Zorica, Stępniak, Piotr, Wojdan, Konrad, Sledge, George W., Steeg, Patricia S., Badve, Sunil
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cited_by cdi_FETCH-LOGICAL-c573t-839eba66751425345e476d7556aef19fd259bb64dca3e3e860eae240a78de8713
cites cdi_FETCH-LOGICAL-c573t-839eba66751425345e476d7556aef19fd259bb64dca3e3e860eae240a78de8713
container_end_page 216
container_issue 1
container_start_page 205
container_title Journal of neuro-oncology
container_volume 122
creator Duchnowska, Renata
Jassem, Jacek
Goswami, Chirayu Pankaj
Dundar, Murat
Gökmen-Polar, Yesim
Li, Lang
Woditschka, Stephan
Biernat, Wojciech
Sosińska-Mielcarek, Katarzyna
Czartoryska-Arłukowicz, Bogumiła
Radecka, Barbara
Tomasevic, Zorica
Stępniak, Piotr
Wojdan, Konrad
Sledge, George W.
Steeg, Patricia S.
Badve, Sunil
description The overexpression or amplification of the human epidermal growth factor receptor 2 gene ( HER2 / neu ) is associated with high risk of brain metastasis (BM). The identification of patients at highest immediate risk of BM could optimize screening and facilitate interventional trials. We performed gene expression analysis using complementary deoxyribonucleic acid-mediated annealing, selection, extension and ligation and real-time quantitative reverse transcription PCR (qRT-PCR) in primary tumor samples from two independent cohorts of advanced HER2 positive breast cancer patients. Additionally, we analyzed predictive relevance of clinicopathological factors in this series. Study group included discovery Cohort A (84 patients) and validation Cohort B (75 patients). The only independent variables associated with the development of early BM in both cohorts were the visceral location of first distant relapse [Cohort A: hazard ratio (HR) 7.4, 95 % CI 2.4–22.3; p  
doi_str_mv 10.1007/s11060-014-1704-y
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The identification of patients at highest immediate risk of BM could optimize screening and facilitate interventional trials. We performed gene expression analysis using complementary deoxyribonucleic acid-mediated annealing, selection, extension and ligation and real-time quantitative reverse transcription PCR (qRT-PCR) in primary tumor samples from two independent cohorts of advanced HER2 positive breast cancer patients. Additionally, we analyzed predictive relevance of clinicopathological factors in this series. Study group included discovery Cohort A (84 patients) and validation Cohort B (75 patients). The only independent variables associated with the development of early BM in both cohorts were the visceral location of first distant relapse [Cohort A: hazard ratio (HR) 7.4, 95 % CI 2.4–22.3; p  &lt; 0.001; Cohort B: HR 6.1, 95 % CI 1.5–25.6; p  = 0.01] and the lack of trastuzumab administration in the metastatic setting (Cohort A: HR 5.0, 95 % CI 1.4–10.0; p  = 0.009; Cohort B: HR 10.0, 95 % CI 2.0–100.0; p  = 0.008). A profile including 13 genes was associated with early (≤36 months) symptomatic BM in the discovery cohort. This was refined by qRT-PCR to a 3-gene classifier ( RAD51 , HDGF , TPR ) highly predictive of early BM (HR 5.3, 95 % CI 1.6–16.7; p  = 0.005; multivariate analysis). However, predictive value of the classifier was not confirmed in the independent validation Cohort B. 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The identification of patients at highest immediate risk of BM could optimize screening and facilitate interventional trials. We performed gene expression analysis using complementary deoxyribonucleic acid-mediated annealing, selection, extension and ligation and real-time quantitative reverse transcription PCR (qRT-PCR) in primary tumor samples from two independent cohorts of advanced HER2 positive breast cancer patients. Additionally, we analyzed predictive relevance of clinicopathological factors in this series. Study group included discovery Cohort A (84 patients) and validation Cohort B (75 patients). 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Public Health</subject><subject>Middle Aged</subject><subject>Neoplasm Grading</subject><subject>Neoplasm Staging</subject><subject>Neurology</subject><subject>Oligonucleotide Array Sequence Analysis</subject><subject>Oncology</subject><subject>Prognosis</subject><subject>Real-Time Polymerase Chain Reaction</subject><subject>Receptor, ErbB-2 - genetics</subject><subject>Receptors, Estrogen - metabolism</subject><subject>Receptors, Progesterone - metabolism</subject><subject>Reverse Transcriptase Polymerase Chain Reaction</subject><subject>RNA, Messenger - genetics</subject><subject>Survival Rate</subject><issn>0167-594X</issn><issn>1573-7373</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2015</creationdate><recordtype>article</recordtype><recordid>eNqNks-KFDEQxoMo7rj6AF4k4MVLa9L5130RZFldYUERBW-hOl3dm6UnaZOewX4PH9iMsy6rIAghOdQv31dVfIQ85ewlZ8y8ypwzzSrGZcUNk9V6j2y4MqIywoj7ZMO4NpVq5dcT8ijna8aYNII_JCe1UqrVTbMhPz4m7L1bfBgpQppW2iXwgW5xgVwOZtqVu6cxUDf54F2cYbmKUxy9g4kO4JaYMoXQ0xEDUvw-J8zZFx4CTGv2mRY96PcQXNG5OP9UV3PMfvF7LGZYbKg71BItyh7Dkh-TBwNMGZ_cvKfky9vzz2cX1eWHd-_P3lxWrgy5VI1osQOtjeKyVkIqlEb3RikNOPB26GvVdp2WvQOBAhvNELCWDEzTY2O4OCWvj7rzrtti74p3gsnOyW8hrTaCt39Wgr-yY9xbKZRomroIvLgRSPHbDvNitz47nCYIGHfZcq2bWpW16_9BaymEUIe2nv-FXsddKsv8RXElpWpVofiRcinmnHC47Zsze4iHPcbDlnjYQzzsWv48uzvw7Y_feShAfQRyKYUR0x3rf6r-BLMbyX4</recordid><startdate>20150301</startdate><enddate>20150301</enddate><creator>Duchnowska, Renata</creator><creator>Jassem, Jacek</creator><creator>Goswami, Chirayu Pankaj</creator><creator>Dundar, Murat</creator><creator>Gökmen-Polar, Yesim</creator><creator>Li, Lang</creator><creator>Woditschka, Stephan</creator><creator>Biernat, Wojciech</creator><creator>Sosińska-Mielcarek, Katarzyna</creator><creator>Czartoryska-Arłukowicz, Bogumiła</creator><creator>Radecka, Barbara</creator><creator>Tomasevic, Zorica</creator><creator>Stępniak, Piotr</creator><creator>Wojdan, Konrad</creator><creator>Sledge, George W.</creator><creator>Steeg, Patricia S.</creator><creator>Badve, Sunil</creator><general>Springer US</general><general>Springer Nature B.V</general><scope>C6C</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7TK</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8AO</scope><scope>8C1</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>BENPR</scope><scope>CCPQU</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>K9.</scope><scope>M0S</scope><scope>M1P</scope><scope>PHGZM</scope><scope>PHGZT</scope><scope>PJZUB</scope><scope>PKEHL</scope><scope>PPXIY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>7X8</scope><scope>8FD</scope><scope>FR3</scope><scope>P64</scope><scope>RC3</scope><scope>5PM</scope></search><sort><creationdate>20150301</creationdate><title>Predicting early brain metastases based on clinicopathological factors and gene expression analysis in advanced HER2-positive breast cancer patients</title><author>Duchnowska, Renata ; 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The identification of patients at highest immediate risk of BM could optimize screening and facilitate interventional trials. We performed gene expression analysis using complementary deoxyribonucleic acid-mediated annealing, selection, extension and ligation and real-time quantitative reverse transcription PCR (qRT-PCR) in primary tumor samples from two independent cohorts of advanced HER2 positive breast cancer patients. Additionally, we analyzed predictive relevance of clinicopathological factors in this series. Study group included discovery Cohort A (84 patients) and validation Cohort B (75 patients). The only independent variables associated with the development of early BM in both cohorts were the visceral location of first distant relapse [Cohort A: hazard ratio (HR) 7.4, 95 % CI 2.4–22.3; p  &lt; 0.001; Cohort B: HR 6.1, 95 % CI 1.5–25.6; p  = 0.01] and the lack of trastuzumab administration in the metastatic setting (Cohort A: HR 5.0, 95 % CI 1.4–10.0; p  = 0.009; Cohort B: HR 10.0, 95 % CI 2.0–100.0; p  = 0.008). A profile including 13 genes was associated with early (≤36 months) symptomatic BM in the discovery cohort. This was refined by qRT-PCR to a 3-gene classifier ( RAD51 , HDGF , TPR ) highly predictive of early BM (HR 5.3, 95 % CI 1.6–16.7; p  = 0.005; multivariate analysis). However, predictive value of the classifier was not confirmed in the independent validation Cohort B. The presence of visceral metastases and the lack of trastuzumab administration in the metastatic setting apparently increase the likelihood of early BM in advanced HER2-positive breast cancer.</abstract><cop>Boston</cop><pub>Springer US</pub><pmid>25559688</pmid><doi>10.1007/s11060-014-1704-y</doi><tpages>12</tpages><oa>free_for_read</oa></addata></record>
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1573-7373
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source Springer Nature
subjects Adult
Aged
Biomarkers, Tumor - genetics
Brain Neoplasms - genetics
Brain Neoplasms - mortality
Brain Neoplasms - secondary
Brain Neoplasms - therapy
Breast Neoplasms - genetics
Breast Neoplasms - mortality
Breast Neoplasms - pathology
Breast Neoplasms - therapy
Carcinoma, Ductal, Breast - genetics
Carcinoma, Ductal, Breast - mortality
Carcinoma, Ductal, Breast - secondary
Carcinoma, Ductal, Breast - therapy
Carcinoma, Lobular - genetics
Carcinoma, Lobular - mortality
Carcinoma, Lobular - secondary
Carcinoma, Lobular - therapy
Clinical Study
Cohort Studies
Combined Modality Therapy
Female
Follow-Up Studies
Gene Expression Profiling
Humans
Medicine
Medicine & Public Health
Middle Aged
Neoplasm Grading
Neoplasm Staging
Neurology
Oligonucleotide Array Sequence Analysis
Oncology
Prognosis
Real-Time Polymerase Chain Reaction
Receptor, ErbB-2 - genetics
Receptors, Estrogen - metabolism
Receptors, Progesterone - metabolism
Reverse Transcriptase Polymerase Chain Reaction
RNA, Messenger - genetics
Survival Rate
title Predicting early brain metastases based on clinicopathological factors and gene expression analysis in advanced HER2-positive breast cancer patients
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