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Integrative and systemic approaches for evaluating PPARβ/δ (PPARD) function
The peroxisome proliferator-activated receptors (PPARs) are a group of nuclear receptors that function as transcription factors regulating the expression of genes involved in cellular differentiation, development, metabolism and also tumorigenesis. Three PPAR isotypes (α, β/δ and γ) have been identi...
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Published in: | Nuclear receptor signaling 2015, Vol.13 (1), p.e001-e001 |
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description | The peroxisome proliferator-activated receptors (PPARs) are a group of nuclear receptors that function as transcription factors regulating the expression of genes involved in cellular differentiation, development, metabolism and also tumorigenesis. Three PPAR isotypes (α, β/δ and γ) have been identified, among which PPARβ/δ is the most difficult to functionally examine due to its tissue-specific diversity in cell fate determination, energy metabolism and housekeeping activities. PPARβ/δ acts both in a ligand-dependent and -independent manner. The specific type of regulation, activation or repression, is determined by many factors, among which the type of ligand, the presence/absence of PPARβ/δ-interacting corepressor or coactivator complexes and PPARβ/δ protein post-translational modifications play major roles. Recently, new global approaches to the study of nuclear receptors have made it possible to evaluate their molecular activity in a more systemic fashion, rather than deeply digging into a single pathway/function. This systemic approach is ideally suited for studying PPARβ/δ, due to its ubiquitous expression in various organs and its overlapping and tissue-specific transcriptomic signatures. The aim of the present review is to present in detail the diversity of PPARβ/δ function, focusing on the different information gained at the systemic level, and describing the global and unbiased approaches that combine a systems view with molecular understanding. |
doi_str_mv | 10.1621/nrs.13001 |
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Three PPAR isotypes (α, β/δ and γ) have been identified, among which PPARβ/δ is the most difficult to functionally examine due to its tissue-specific diversity in cell fate determination, energy metabolism and housekeeping activities. PPARβ/δ acts both in a ligand-dependent and -independent manner. The specific type of regulation, activation or repression, is determined by many factors, among which the type of ligand, the presence/absence of PPARβ/δ-interacting corepressor or coactivator complexes and PPARβ/δ protein post-translational modifications play major roles. Recently, new global approaches to the study of nuclear receptors have made it possible to evaluate their molecular activity in a more systemic fashion, rather than deeply digging into a single pathway/function. This systemic approach is ideally suited for studying PPARβ/δ, due to its ubiquitous expression in various organs and its overlapping and tissue-specific transcriptomic signatures. The aim of the present review is to present in detail the diversity of PPARβ/δ function, focusing on the different information gained at the systemic level, and describing the global and unbiased approaches that combine a systems view with molecular understanding.</description><subject>Animals</subject><subject>Base Sequence</subject><subject>Cell Physiological Phenomena</subject><subject>Genomics</subject><subject>Humans</subject><subject>PPAR delta - chemistry</subject><subject>PPAR delta - genetics</subject><subject>PPAR delta - metabolism</subject><subject>PPAR-beta - chemistry</subject><subject>PPAR-beta - genetics</subject><subject>PPAR-beta - metabolism</subject><subject>Systems Biology - methods</subject><issn>1550-7629</issn><issn>1550-7629</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2015</creationdate><recordtype>article</recordtype><recordid>eNpVkMtKAzEUhoMoWi8LX0CybBfVZCbJTDZCqbeCYhFdh0zmpI5Mk5rMFHwt8Tl8JqdWpa7OD-fjP4cPoWNKTqlI6JkL8ZSmhNAt1KOck2EmErm9kffQfowvhKQ8l3wX7SVcMk5y0kN3E9fALOimWgLWrsTxLTYwrwzWi0Xw2jxDxNYHDEtdtx3mZng6HT18vp99fuD-Kl4MsG2daSrvDtGO1XWEo595gJ6uLh_HN8Pb--vJeHQ7NIkkdNh9IY0RIApDspLlmhaECEiELEVuM2BpmTJuIcmzAliWF9YSzgSxRpg8gSI9QOfr3kVbzKE04Jqga7UI1VyHN-V1pf5vXPWsZn6pGKNSCNYV9H8Kgn9tITZqXkUDda0d-DYqKmRKc86k7NDBGjXBxxjA_p2hRK30q06_-tbfsSebf_2Rv77TL-fLglM</recordid><startdate>2015</startdate><enddate>2015</enddate><creator>Giordano Attianese, Greta M P</creator><creator>Desvergne, Béatrice</creator><general>Nuclear Receptor Signaling Atlas</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>2015</creationdate><title>Integrative and systemic approaches for evaluating PPARβ/δ (PPARD) function</title><author>Giordano Attianese, Greta M P ; Desvergne, Béatrice</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c2901-5899cc6e6bc07d48a1b006e269d68f7e43d345fe287be478bff05460fc6c82eb3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2015</creationdate><topic>Animals</topic><topic>Base Sequence</topic><topic>Cell Physiological Phenomena</topic><topic>Genomics</topic><topic>Humans</topic><topic>PPAR delta - chemistry</topic><topic>PPAR delta - genetics</topic><topic>PPAR delta - metabolism</topic><topic>PPAR-beta - chemistry</topic><topic>PPAR-beta - genetics</topic><topic>PPAR-beta - metabolism</topic><topic>Systems Biology - methods</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Giordano Attianese, Greta M P</creatorcontrib><creatorcontrib>Desvergne, Béatrice</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Nuclear receptor signaling</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Giordano Attianese, Greta M P</au><au>Desvergne, Béatrice</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Integrative and systemic approaches for evaluating PPARβ/δ (PPARD) function</atitle><jtitle>Nuclear receptor signaling</jtitle><addtitle>Nucl Recept Signal</addtitle><date>2015</date><risdate>2015</risdate><volume>13</volume><issue>1</issue><spage>e001</spage><epage>e001</epage><pages>e001-e001</pages><issn>1550-7629</issn><eissn>1550-7629</eissn><abstract>The peroxisome proliferator-activated receptors (PPARs) are a group of nuclear receptors that function as transcription factors regulating the expression of genes involved in cellular differentiation, development, metabolism and also tumorigenesis. Three PPAR isotypes (α, β/δ and γ) have been identified, among which PPARβ/δ is the most difficult to functionally examine due to its tissue-specific diversity in cell fate determination, energy metabolism and housekeeping activities. PPARβ/δ acts both in a ligand-dependent and -independent manner. The specific type of regulation, activation or repression, is determined by many factors, among which the type of ligand, the presence/absence of PPARβ/δ-interacting corepressor or coactivator complexes and PPARβ/δ protein post-translational modifications play major roles. Recently, new global approaches to the study of nuclear receptors have made it possible to evaluate their molecular activity in a more systemic fashion, rather than deeply digging into a single pathway/function. This systemic approach is ideally suited for studying PPARβ/δ, due to its ubiquitous expression in various organs and its overlapping and tissue-specific transcriptomic signatures. 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subjects | Animals Base Sequence Cell Physiological Phenomena Genomics Humans PPAR delta - chemistry PPAR delta - genetics PPAR delta - metabolism PPAR-beta - chemistry PPAR-beta - genetics PPAR-beta - metabolism Systems Biology - methods |
title | Integrative and systemic approaches for evaluating PPARβ/δ (PPARD) function |
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