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Cloning and identification of NS5ATP2 gene and its spliced variant transactivated by hepatitis C virus non-structural protein 5A
To clone, identify and study new NS5ATP2 gene and its spliced variant transactivated by hepatitis C virus non-structural protein 5A. On the basis of subtractive cDNA library of genes transactivated by NS5A protein of hepatitis C virus, the coding sequence of new gene and its spliced variant were obt...
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Published in: | World journal of gastroenterology : WJG 2004-06, Vol.10 (12), p.1735-1739 |
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container_title | World journal of gastroenterology : WJG |
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creator | Yang, Qian Cheng, Jun Liu, Yan Hong, Yuan Wang, Jian-Jun Zhang, Shu-Lin |
description | To clone, identify and study new NS5ATP2 gene and its spliced variant transactivated by hepatitis C virus non-structural protein 5A.
On the basis of subtractive cDNA library of genes transactivated by NS5A protein of hepatitis C virus, the coding sequence of new gene and its spliced variant were obtained by bioinformatics method. Polymerase chain reaction (PCR) was conducted to amplify NS5ATP2 gene.
The coding sequence of a new gene and its spliced variant were cloned and identified successfully.
A new gene has been recognized as the new target transactivated by HCV NS5A protein. These results brought some new clues for studying the biological functions of new genes and pathogenesis of the viral proteins. |
doi_str_mv | 10.3748/wjg.v10.i12.1735 |
format | article |
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On the basis of subtractive cDNA library of genes transactivated by NS5A protein of hepatitis C virus, the coding sequence of new gene and its spliced variant were obtained by bioinformatics method. Polymerase chain reaction (PCR) was conducted to amplify NS5ATP2 gene.
The coding sequence of a new gene and its spliced variant were cloned and identified successfully.
A new gene has been recognized as the new target transactivated by HCV NS5A protein. These results brought some new clues for studying the biological functions of new genes and pathogenesis of the viral proteins.</description><identifier>ISSN: 1007-9327</identifier><identifier>EISSN: 2219-2840</identifier><identifier>DOI: 10.3748/wjg.v10.i12.1735</identifier><identifier>PMID: 15188496</identifier><language>eng</language><publisher>United States: Department of Infectious Disease, First Hospital of Xi'an Jiaotong University, Xi'an 710061, Shaanxi Province, China%Gene Therapy Research Center, Institute of Infectious Diseases, 302 Hospital of PLA, 100 Xisihuanzhong Road, Beijing 100039, China</publisher><subject>Antigens, Polyomavirus Transforming - genetics ; Base Sequence ; Cell Line, Tumor ; Cloning, Molecular ; Gene Expression Regulation, Viral ; Gene Library ; Hepacivirus - genetics ; Hepatoblastoma ; Humans ; Liver Neoplasms ; Molecular Sequence Data ; Promoter Regions, Genetic ; RNA Splicing ; Viral Hepatitis ; Viral Nonstructural Proteins - genetics ; Viral Nonstructural Proteins - metabolism</subject><ispartof>World journal of gastroenterology : WJG, 2004-06, Vol.10 (12), p.1735-1739</ispartof><rights>Copyright © Wanfang Data Co. Ltd. All Rights Reserved.</rights><rights>The Author(s) 2004. Published by Baishideng Publishing Group Inc. All rights reserved. 2004</rights><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c379t-de4e0572cdbee6c051c15acf3a0bf30dfb692d8d31788756cc6e0d3d3e76d8153</citedby><cites>FETCH-LOGICAL-c379t-de4e0572cdbee6c051c15acf3a0bf30dfb692d8d31788756cc6e0d3d3e76d8153</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Uhttp://www.wanfangdata.com.cn/images/PeriodicalImages/wjg/wjg.jpg</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4572259/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4572259/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,723,776,780,881,27901,27902,53766,53768</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/15188496$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Yang, Qian</creatorcontrib><creatorcontrib>Cheng, Jun</creatorcontrib><creatorcontrib>Liu, Yan</creatorcontrib><creatorcontrib>Hong, Yuan</creatorcontrib><creatorcontrib>Wang, Jian-Jun</creatorcontrib><creatorcontrib>Zhang, Shu-Lin</creatorcontrib><title>Cloning and identification of NS5ATP2 gene and its spliced variant transactivated by hepatitis C virus non-structural protein 5A</title><title>World journal of gastroenterology : WJG</title><addtitle>World J Gastroenterol</addtitle><description>To clone, identify and study new NS5ATP2 gene and its spliced variant transactivated by hepatitis C virus non-structural protein 5A.
On the basis of subtractive cDNA library of genes transactivated by NS5A protein of hepatitis C virus, the coding sequence of new gene and its spliced variant were obtained by bioinformatics method. Polymerase chain reaction (PCR) was conducted to amplify NS5ATP2 gene.
The coding sequence of a new gene and its spliced variant were cloned and identified successfully.
A new gene has been recognized as the new target transactivated by HCV NS5A protein. These results brought some new clues for studying the biological functions of new genes and pathogenesis of the viral proteins.</description><subject>Antigens, Polyomavirus Transforming - genetics</subject><subject>Base Sequence</subject><subject>Cell Line, Tumor</subject><subject>Cloning, Molecular</subject><subject>Gene Expression Regulation, Viral</subject><subject>Gene Library</subject><subject>Hepacivirus - genetics</subject><subject>Hepatoblastoma</subject><subject>Humans</subject><subject>Liver Neoplasms</subject><subject>Molecular Sequence Data</subject><subject>Promoter Regions, Genetic</subject><subject>RNA Splicing</subject><subject>Viral Hepatitis</subject><subject>Viral Nonstructural Proteins - genetics</subject><subject>Viral Nonstructural Proteins - metabolism</subject><issn>1007-9327</issn><issn>2219-2840</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2004</creationdate><recordtype>article</recordtype><recordid>eNpVkUuP0zAUhS0EYsrAnhXyArFL8SOOkw1SVfGSRoDEsLYc-ybjKrWD7WQ0O346rlrx2Njy9bnnnqsPoZeUbLms27f3h3G7loejbEslF4_QhjHaVaytyWO0oYTIquNMXqFnKR0IYZwL9hRdUUHbtu6aDfq1n4J3fsTaW-ws-OwGZ3R2weMw4C_fxe72G8MjeDhLcsJpnpwBi1cdnfYZ56h90ia7VedS7h_wHczFIruE93h1cUnYB1-lHBeTl6gnPMeQwXksds_Rk0FPCV5c7mv048P72_2n6ubrx8_73U1luOxyZaEGIiQztgdoDBHUUKHNwDXpB07s0Dcds63lVLatFI0xDRDLLQfZ2JYKfo3enX3npT-CNWXTEkTN0R11fFBBO_X_j3d3agyrqstUJrpi8PpscK_9oP2oDmGJvkRWhQIjpKblOMneXObE8HOBlNXRJQPTpD2EJSlZVA0npAjJWWhiSCnC8CcLJepE9-SrCl1V6KoT3dLy6t8d_jZccPLfKPKkew</recordid><startdate>20040615</startdate><enddate>20040615</enddate><creator>Yang, Qian</creator><creator>Cheng, Jun</creator><creator>Liu, Yan</creator><creator>Hong, Yuan</creator><creator>Wang, Jian-Jun</creator><creator>Zhang, Shu-Lin</creator><general>Department of Infectious Disease, First Hospital of Xi'an Jiaotong University, Xi'an 710061, Shaanxi Province, China%Gene Therapy Research Center, Institute of Infectious Diseases, 302 Hospital of PLA, 100 Xisihuanzhong Road, Beijing 100039, China</general><general>Baishideng Publishing Group Inc</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>2B.</scope><scope>4A8</scope><scope>92I</scope><scope>93N</scope><scope>PSX</scope><scope>TCJ</scope><scope>5PM</scope></search><sort><creationdate>20040615</creationdate><title>Cloning and identification of NS5ATP2 gene and its spliced variant transactivated by hepatitis C virus non-structural protein 5A</title><author>Yang, Qian ; Cheng, Jun ; Liu, Yan ; Hong, Yuan ; Wang, Jian-Jun ; Zhang, Shu-Lin</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c379t-de4e0572cdbee6c051c15acf3a0bf30dfb692d8d31788756cc6e0d3d3e76d8153</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2004</creationdate><topic>Antigens, Polyomavirus Transforming - genetics</topic><topic>Base Sequence</topic><topic>Cell Line, Tumor</topic><topic>Cloning, Molecular</topic><topic>Gene Expression Regulation, Viral</topic><topic>Gene Library</topic><topic>Hepacivirus - genetics</topic><topic>Hepatoblastoma</topic><topic>Humans</topic><topic>Liver Neoplasms</topic><topic>Molecular Sequence Data</topic><topic>Promoter Regions, Genetic</topic><topic>RNA Splicing</topic><topic>Viral Hepatitis</topic><topic>Viral Nonstructural Proteins - genetics</topic><topic>Viral Nonstructural Proteins - metabolism</topic><toplevel>online_resources</toplevel><creatorcontrib>Yang, Qian</creatorcontrib><creatorcontrib>Cheng, Jun</creatorcontrib><creatorcontrib>Liu, Yan</creatorcontrib><creatorcontrib>Hong, Yuan</creatorcontrib><creatorcontrib>Wang, Jian-Jun</creatorcontrib><creatorcontrib>Zhang, Shu-Lin</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>Wanfang Data Journals - Hong Kong</collection><collection>WANFANG Data Centre</collection><collection>Wanfang Data Journals</collection><collection>万方数据期刊 - 香港版</collection><collection>China Online Journals (COJ)</collection><collection>China Online Journals (COJ)</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>World journal of gastroenterology : WJG</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Yang, Qian</au><au>Cheng, Jun</au><au>Liu, Yan</au><au>Hong, Yuan</au><au>Wang, Jian-Jun</au><au>Zhang, Shu-Lin</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Cloning and identification of NS5ATP2 gene and its spliced variant transactivated by hepatitis C virus non-structural protein 5A</atitle><jtitle>World journal of gastroenterology : WJG</jtitle><addtitle>World J Gastroenterol</addtitle><date>2004-06-15</date><risdate>2004</risdate><volume>10</volume><issue>12</issue><spage>1735</spage><epage>1739</epage><pages>1735-1739</pages><issn>1007-9327</issn><eissn>2219-2840</eissn><abstract>To clone, identify and study new NS5ATP2 gene and its spliced variant transactivated by hepatitis C virus non-structural protein 5A.
On the basis of subtractive cDNA library of genes transactivated by NS5A protein of hepatitis C virus, the coding sequence of new gene and its spliced variant were obtained by bioinformatics method. Polymerase chain reaction (PCR) was conducted to amplify NS5ATP2 gene.
The coding sequence of a new gene and its spliced variant were cloned and identified successfully.
A new gene has been recognized as the new target transactivated by HCV NS5A protein. These results brought some new clues for studying the biological functions of new genes and pathogenesis of the viral proteins.</abstract><cop>United States</cop><pub>Department of Infectious Disease, First Hospital of Xi'an Jiaotong University, Xi'an 710061, Shaanxi Province, China%Gene Therapy Research Center, Institute of Infectious Diseases, 302 Hospital of PLA, 100 Xisihuanzhong Road, Beijing 100039, China</pub><pmid>15188496</pmid><doi>10.3748/wjg.v10.i12.1735</doi><tpages>5</tpages></addata></record> |
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subjects | Antigens, Polyomavirus Transforming - genetics Base Sequence Cell Line, Tumor Cloning, Molecular Gene Expression Regulation, Viral Gene Library Hepacivirus - genetics Hepatoblastoma Humans Liver Neoplasms Molecular Sequence Data Promoter Regions, Genetic RNA Splicing Viral Hepatitis Viral Nonstructural Proteins - genetics Viral Nonstructural Proteins - metabolism |
title | Cloning and identification of NS5ATP2 gene and its spliced variant transactivated by hepatitis C virus non-structural protein 5A |
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