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Anti—HBV hairpin ribozyme—mediated cleavage of target RNA in vitro
To study the preparation and cleavage activity of HpRz directed against the transcript of HBV core gene in vitro. HpRz gene designed by computer targeting the transcript of HBV core gene was cloned into the vector p1.5 between 5'-cis-Rz and 3'-cis-Rz. 32p-labeled HpRz transcript proved whe...
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Published in: | World journal of gastroenterology : WJG 2002-02, Vol.8 (1), p.91-94 |
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container_title | World journal of gastroenterology : WJG |
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creator | Song, Yu-Hu Lin, Ju-Sheng Liu, Nan-Zhi Kong, Xin-Juan Xie, Na Wang, Nan-Xia Jin, You-Xin Liang, Kuo-Huan |
description | To study the preparation and cleavage activity of HpRz directed against the transcript of HBV core gene in vitro.
HpRz gene designed by computer targeting the transcript of HBV core gene was cloned into the vector p1.5 between 5'-cis-Rz and 3'-cis-Rz. 32p-labeled HpRz transcript proved whether the vector fit for the preparation of hairpin ribozyme in vitro. 32p-labeled pKC transcript containing HBV core region as target-RNA was transcribed using T7 RNA polymerase and purified by denaturing PAGE. Cold HpRz transcript was incubated with 32p-labeled target-RNAs under different conditions and radio autographed after denaturing polyacrylamide gel electrophoresis.
HpRz has the specific ability of cleavage of target RNA at 37 degrees and 12 mM MgCl2. Km=26.31 nmol/L, Kcat=0.18/min. These results revealed that the design of HpRz was correct.
HpRz prepared in this study possesses specific catalytic activity from the identification of cleavage activity. These results indicate that hairpin ribozyme may intracellularly inhibit the replication of HBV, therefore it may become a novel potent weapon for the treatment of hepatitis B. |
doi_str_mv | 10.3748/wjg.v8.i1.91 |
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HpRz gene designed by computer targeting the transcript of HBV core gene was cloned into the vector p1.5 between 5'-cis-Rz and 3'-cis-Rz. 32p-labeled HpRz transcript proved whether the vector fit for the preparation of hairpin ribozyme in vitro. 32p-labeled pKC transcript containing HBV core region as target-RNA was transcribed using T7 RNA polymerase and purified by denaturing PAGE. Cold HpRz transcript was incubated with 32p-labeled target-RNAs under different conditions and radio autographed after denaturing polyacrylamide gel electrophoresis.
HpRz has the specific ability of cleavage of target RNA at 37 degrees and 12 mM MgCl2. Km=26.31 nmol/L, Kcat=0.18/min. These results revealed that the design of HpRz was correct.
HpRz prepared in this study possesses specific catalytic activity from the identification of cleavage activity. These results indicate that hairpin ribozyme may intracellularly inhibit the replication of HBV, therefore it may become a novel potent weapon for the treatment of hepatitis B.</description><identifier>ISSN: 1007-9327</identifier><identifier>EISSN: 2219-2840</identifier><identifier>DOI: 10.3748/wjg.v8.i1.91</identifier><identifier>PMID: 11833079</identifier><language>eng</language><publisher>United States: State Key Laboratory of Molecular Biology, Shanghai Institute of Biochemistry, Chinese Academy of Science, Shanghai 200031, China%Institute of Liver Diseases, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Techology, Wuhan 430030, Hubei Province, China</publisher><subject>Base Sequence ; Enzyme Activation ; Genetic Therapy ; Hepatitis B - therapy ; Hepatitis B - virology ; Hepatitis B Core Antigens - genetics ; Hepatitis B virus - genetics ; Humans ; In Vitro Techniques ; Kinetics ; Molecular Sequence Data ; Plasmids ; RNA, Catalytic - metabolism ; RNA, Viral - metabolism ; RNA分裂 ; Transcription, Genetic ; Viral Liver Diseases ; 乙型肝炎 ; 抗病毒机制 ; 靶细胞</subject><ispartof>World journal of gastroenterology : WJG, 2002-02, Vol.8 (1), p.91-94</ispartof><rights>Copyright © Wanfang Data Co. Ltd. All Rights Reserved.</rights><rights>The Author(s) 2002. Published by Baishideng Publishing Group Inc. All rights reserved. 2002</rights><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c397t-b24e57daad8a2c4b9bd86e8f64bcbcc8d096267ca956ece5c594ee0db476763</citedby><cites>FETCH-LOGICAL-c397t-b24e57daad8a2c4b9bd86e8f64bcbcc8d096267ca956ece5c594ee0db476763</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Uhttp://image.cqvip.com/vip1000/qk/84123X/84123X.jpg</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4656634/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4656634/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,723,776,780,881,27903,27904,53769,53771</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/11833079$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Song, Yu-Hu</creatorcontrib><creatorcontrib>Lin, Ju-Sheng</creatorcontrib><creatorcontrib>Liu, Nan-Zhi</creatorcontrib><creatorcontrib>Kong, Xin-Juan</creatorcontrib><creatorcontrib>Xie, Na</creatorcontrib><creatorcontrib>Wang, Nan-Xia</creatorcontrib><creatorcontrib>Jin, You-Xin</creatorcontrib><creatorcontrib>Liang, Kuo-Huan</creatorcontrib><title>Anti—HBV hairpin ribozyme—mediated cleavage of target RNA in vitro</title><title>World journal of gastroenterology : WJG</title><addtitle>World Journal of Gastroenterology</addtitle><description>To study the preparation and cleavage activity of HpRz directed against the transcript of HBV core gene in vitro.
HpRz gene designed by computer targeting the transcript of HBV core gene was cloned into the vector p1.5 between 5'-cis-Rz and 3'-cis-Rz. 32p-labeled HpRz transcript proved whether the vector fit for the preparation of hairpin ribozyme in vitro. 32p-labeled pKC transcript containing HBV core region as target-RNA was transcribed using T7 RNA polymerase and purified by denaturing PAGE. Cold HpRz transcript was incubated with 32p-labeled target-RNAs under different conditions and radio autographed after denaturing polyacrylamide gel electrophoresis.
HpRz has the specific ability of cleavage of target RNA at 37 degrees and 12 mM MgCl2. Km=26.31 nmol/L, Kcat=0.18/min. These results revealed that the design of HpRz was correct.
HpRz prepared in this study possesses specific catalytic activity from the identification of cleavage activity. These results indicate that hairpin ribozyme may intracellularly inhibit the replication of HBV, therefore it may become a novel potent weapon for the treatment of hepatitis B.</description><subject>Base Sequence</subject><subject>Enzyme Activation</subject><subject>Genetic Therapy</subject><subject>Hepatitis B - therapy</subject><subject>Hepatitis B - virology</subject><subject>Hepatitis B Core Antigens - genetics</subject><subject>Hepatitis B virus - genetics</subject><subject>Humans</subject><subject>In Vitro Techniques</subject><subject>Kinetics</subject><subject>Molecular Sequence Data</subject><subject>Plasmids</subject><subject>RNA, Catalytic - metabolism</subject><subject>RNA, Viral - metabolism</subject><subject>RNA分裂</subject><subject>Transcription, Genetic</subject><subject>Viral Liver Diseases</subject><subject>乙型肝炎</subject><subject>抗病毒机制</subject><subject>靶细胞</subject><issn>1007-9327</issn><issn>2219-2840</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2002</creationdate><recordtype>article</recordtype><recordid>eNpVkcuKFDEUQIMoTju6cy0liCurzavy2Ay0g-MIg4KK25CkblWnrU56UtU1jCs_wi_0S8zQjY9VIDmcHO5F6CnBSya5en2z6ZezWgay1OQeWlBKdE0Vx_fRgmAsa82oPEGPxnGDMWWsoQ_RCSGKMSz1Al2s4hR-_fh5-eZrtbYh70KscnDp--0WyvUW2mAnaCs_gJ1tD1XqqsnmHqbq04dVVeg5TDk9Rg86O4zw5Hieos8Xb7-cX9ZXH9-9P19d1Z5pOdWOcmhka22rLPXcadcqAaoT3HnnvWqxFlRIb3UjwEPjG80BcOu4FFKwU3R2sO72rpR5iFO2g9nlsLX51iQbzP8vMaxNn2bDRSME40Xw4iC4sbGzsTebtM-xBJsyRVrmgwkmumAvj__kdL2HcTLbMHoYBhsh7UcjCWeyoU0BXx1An9M4Zuj-tBBs7rZz5zWzMoEYTQr-7N_-v_BxHQV4fvStU-yvQyl01n_rwgBGEKGVJOw3BG6aMQ</recordid><startdate>20020201</startdate><enddate>20020201</enddate><creator>Song, Yu-Hu</creator><creator>Lin, Ju-Sheng</creator><creator>Liu, Nan-Zhi</creator><creator>Kong, Xin-Juan</creator><creator>Xie, Na</creator><creator>Wang, Nan-Xia</creator><creator>Jin, You-Xin</creator><creator>Liang, Kuo-Huan</creator><general>State Key Laboratory of Molecular Biology, Shanghai Institute of Biochemistry, Chinese Academy of Science, Shanghai 200031, China%Institute of Liver Diseases, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Techology, Wuhan 430030, Hubei Province, China</general><general>Baishideng Publishing Group Inc</general><scope>2RA</scope><scope>92L</scope><scope>CQIGP</scope><scope>W91</scope><scope>~WA</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>2B.</scope><scope>4A8</scope><scope>92I</scope><scope>93N</scope><scope>PSX</scope><scope>TCJ</scope><scope>5PM</scope></search><sort><creationdate>20020201</creationdate><title>Anti—HBV hairpin ribozyme—mediated cleavage of target RNA in vitro</title><author>Song, Yu-Hu ; Lin, Ju-Sheng ; Liu, Nan-Zhi ; Kong, Xin-Juan ; Xie, Na ; Wang, Nan-Xia ; Jin, You-Xin ; Liang, Kuo-Huan</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c397t-b24e57daad8a2c4b9bd86e8f64bcbcc8d096267ca956ece5c594ee0db476763</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2002</creationdate><topic>Base Sequence</topic><topic>Enzyme Activation</topic><topic>Genetic Therapy</topic><topic>Hepatitis B - therapy</topic><topic>Hepatitis B - virology</topic><topic>Hepatitis B Core Antigens - genetics</topic><topic>Hepatitis B virus - genetics</topic><topic>Humans</topic><topic>In Vitro Techniques</topic><topic>Kinetics</topic><topic>Molecular Sequence Data</topic><topic>Plasmids</topic><topic>RNA, Catalytic - metabolism</topic><topic>RNA, Viral - metabolism</topic><topic>RNA分裂</topic><topic>Transcription, Genetic</topic><topic>Viral Liver Diseases</topic><topic>乙型肝炎</topic><topic>抗病毒机制</topic><topic>靶细胞</topic><toplevel>online_resources</toplevel><creatorcontrib>Song, Yu-Hu</creatorcontrib><creatorcontrib>Lin, Ju-Sheng</creatorcontrib><creatorcontrib>Liu, Nan-Zhi</creatorcontrib><creatorcontrib>Kong, Xin-Juan</creatorcontrib><creatorcontrib>Xie, Na</creatorcontrib><creatorcontrib>Wang, Nan-Xia</creatorcontrib><creatorcontrib>Jin, You-Xin</creatorcontrib><creatorcontrib>Liang, Kuo-Huan</creatorcontrib><collection>维普_期刊</collection><collection>中文科技期刊数据库-CALIS站点</collection><collection>中文科技期刊数据库-7.0平台</collection><collection>中文科技期刊数据库-医药卫生</collection><collection>中文科技期刊数据库- 镜像站点</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>Wanfang Data Journals - Hong Kong</collection><collection>WANFANG Data Centre</collection><collection>Wanfang Data Journals</collection><collection>万方数据期刊 - 香港版</collection><collection>China Online Journals (COJ)</collection><collection>China Online Journals (COJ)</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>World journal of gastroenterology : WJG</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Song, Yu-Hu</au><au>Lin, Ju-Sheng</au><au>Liu, Nan-Zhi</au><au>Kong, Xin-Juan</au><au>Xie, Na</au><au>Wang, Nan-Xia</au><au>Jin, You-Xin</au><au>Liang, Kuo-Huan</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Anti—HBV hairpin ribozyme—mediated cleavage of target RNA in vitro</atitle><jtitle>World journal of gastroenterology : WJG</jtitle><addtitle>World Journal of Gastroenterology</addtitle><date>2002-02-01</date><risdate>2002</risdate><volume>8</volume><issue>1</issue><spage>91</spage><epage>94</epage><pages>91-94</pages><issn>1007-9327</issn><eissn>2219-2840</eissn><abstract>To study the preparation and cleavage activity of HpRz directed against the transcript of HBV core gene in vitro.
HpRz gene designed by computer targeting the transcript of HBV core gene was cloned into the vector p1.5 between 5'-cis-Rz and 3'-cis-Rz. 32p-labeled HpRz transcript proved whether the vector fit for the preparation of hairpin ribozyme in vitro. 32p-labeled pKC transcript containing HBV core region as target-RNA was transcribed using T7 RNA polymerase and purified by denaturing PAGE. Cold HpRz transcript was incubated with 32p-labeled target-RNAs under different conditions and radio autographed after denaturing polyacrylamide gel electrophoresis.
HpRz has the specific ability of cleavage of target RNA at 37 degrees and 12 mM MgCl2. Km=26.31 nmol/L, Kcat=0.18/min. These results revealed that the design of HpRz was correct.
HpRz prepared in this study possesses specific catalytic activity from the identification of cleavage activity. These results indicate that hairpin ribozyme may intracellularly inhibit the replication of HBV, therefore it may become a novel potent weapon for the treatment of hepatitis B.</abstract><cop>United States</cop><pub>State Key Laboratory of Molecular Biology, Shanghai Institute of Biochemistry, Chinese Academy of Science, Shanghai 200031, China%Institute of Liver Diseases, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Techology, Wuhan 430030, Hubei Province, China</pub><pmid>11833079</pmid><doi>10.3748/wjg.v8.i1.91</doi><tpages>4</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Base Sequence Enzyme Activation Genetic Therapy Hepatitis B - therapy Hepatitis B - virology Hepatitis B Core Antigens - genetics Hepatitis B virus - genetics Humans In Vitro Techniques Kinetics Molecular Sequence Data Plasmids RNA, Catalytic - metabolism RNA, Viral - metabolism RNA分裂 Transcription, Genetic Viral Liver Diseases 乙型肝炎 抗病毒机制 靶细胞 |
title | Anti—HBV hairpin ribozyme—mediated cleavage of target RNA in vitro |
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