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Association of RBP4 Genotype with Phenotypic Reproductive Traits of Sows
PCR-RFLP was applied to a commercial crossbred pig population in order to investigate the association between polymorphism (SNP) of Retinol-binding protein 4 (RBP4) gene and reproductive performance. 400 sows were genotyped and 2000 records of reproductive traits were used in order to retrieve infor...
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Published in: | Genetics Research International 2016-01, Vol.2016, p.16-20 |
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description | PCR-RFLP was applied to a commercial crossbred pig population in order to investigate the association between polymorphism (SNP) of Retinol-binding protein 4 (RBP4) gene and reproductive performance. 400 sows were genotyped and 2000 records of reproductive traits were used in order to retrieve information about the allele frequencies and the association of the RBP4 gene with main reproductive characteristics of the population. A deviation from the Hardy-Weinberg equilibrium was observed as a result of the AB genotype excess. In addition, the AA genotype saw statistically significant higher values of (i) the total number of born piglets ( p < 0.05 ), (ii) the number of piglets born alive ( p < 0.01 ), and (iii) the number of weaned piglets ( p < 0.01 ). The number of the mummified piglets and the number of the piglets born dead did not differ between the various RBP4 genotypes. Interestingly, the AA genotype had a negative impact ( p < 0.05 ) on the number of piglets born dead, resulting indirectly in a larger litter size. In conclusion, the AA genotype and in extension the A allele of RBP4 gene are in favor of producing larger litter size, suggesting that the RBP4 gene may be used in Marker-Assisted Selection (MAS) programs for a rapid improvement of the reproductive characteristics in pigs. |
doi_str_mv | 10.1155/2016/4940532 |
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P. ; Avdi, M.</creator><contributor>Doggett, Norman A. ; Norman A Doggett</contributor><creatorcontrib>Marantidis, A. ; Laliotis, G. P. ; Avdi, M. ; Doggett, Norman A. ; Norman A Doggett</creatorcontrib><description>PCR-RFLP was applied to a commercial crossbred pig population in order to investigate the association between polymorphism (SNP) of Retinol-binding protein 4 (RBP4) gene and reproductive performance. 400 sows were genotyped and 2000 records of reproductive traits were used in order to retrieve information about the allele frequencies and the association of the RBP4 gene with main reproductive characteristics of the population. A deviation from the Hardy-Weinberg equilibrium was observed as a result of the AB genotype excess. In addition, the AA genotype saw statistically significant higher values of (i) the total number of born piglets ( p < 0.05 ), (ii) the number of piglets born alive ( p < 0.01 ), and (iii) the number of weaned piglets ( p < 0.01 ). The number of the mummified piglets and the number of the piglets born dead did not differ between the various RBP4 genotypes. Interestingly, the AA genotype had a negative impact ( p < 0.05 ) on the number of piglets born dead, resulting indirectly in a larger litter size. In conclusion, the AA genotype and in extension the A allele of RBP4 gene are in favor of producing larger litter size, suggesting that the RBP4 gene may be used in Marker-Assisted Selection (MAS) programs for a rapid improvement of the reproductive characteristics in pigs.</description><identifier>ISSN: 2090-3154</identifier><identifier>ISSN: 2090-3162</identifier><identifier>EISSN: 2090-3162</identifier><identifier>DOI: 10.1155/2016/4940532</identifier><identifier>PMID: 26885398</identifier><language>eng</language><publisher>Egypt: Hindawi Limiteds</publisher><subject>Alleles ; Deoxyribonucleic acid ; DNA ; Gene frequency ; Gene polymorphism ; Genetic aspects ; Genetic testing ; Genotype ; Genotype & phenotype ; Hogs ; Litter size ; Marker-assisted selection ; Parity ; Polymerase chain reaction ; Polymorphism ; Population ; Protein binding ; Restriction fragment length polymorphism ; Retinol-binding protein ; Single nucleotide polymorphisms ; Single-nucleotide polymorphism ; Statistical analysis ; Swine ; Vitamin A</subject><ispartof>Genetics Research International, 2016-01, Vol.2016, p.16-20</ispartof><rights>Copyright © 2016 A. Marantidis et al.</rights><rights>COPYRIGHT 2016 John Wiley & Sons, Inc.</rights><rights>Copyright © 2016 A. Marantidis et al. This work is licensed under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>Copyright © 2016 A. Marantidis et al. 2016</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-a582t-140b634838300b666abc45867f2dc884a495f8037b069d2c92b9b51b57d98333</citedby><cites>FETCH-LOGICAL-a582t-140b634838300b666abc45867f2dc884a495f8037b069d2c92b9b51b57d98333</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.proquest.com/docview/2407662661/fulltextPDF?pq-origsite=primo$$EPDF$$P50$$Gproquest$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.proquest.com/docview/2407662661?pq-origsite=primo$$EHTML$$P50$$Gproquest$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,885,25753,27924,27925,37012,37013,44590,53791,53793,74998</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/26885398$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><contributor>Doggett, Norman A.</contributor><contributor>Norman A Doggett</contributor><creatorcontrib>Marantidis, A.</creatorcontrib><creatorcontrib>Laliotis, G. P.</creatorcontrib><creatorcontrib>Avdi, M.</creatorcontrib><title>Association of RBP4 Genotype with Phenotypic Reproductive Traits of Sows</title><title>Genetics Research International</title><addtitle>Genet Res Int</addtitle><description>PCR-RFLP was applied to a commercial crossbred pig population in order to investigate the association between polymorphism (SNP) of Retinol-binding protein 4 (RBP4) gene and reproductive performance. 400 sows were genotyped and 2000 records of reproductive traits were used in order to retrieve information about the allele frequencies and the association of the RBP4 gene with main reproductive characteristics of the population. A deviation from the Hardy-Weinberg equilibrium was observed as a result of the AB genotype excess. In addition, the AA genotype saw statistically significant higher values of (i) the total number of born piglets ( p < 0.05 ), (ii) the number of piglets born alive ( p < 0.01 ), and (iii) the number of weaned piglets ( p < 0.01 ). The number of the mummified piglets and the number of the piglets born dead did not differ between the various RBP4 genotypes. Interestingly, the AA genotype had a negative impact ( p < 0.05 ) on the number of piglets born dead, resulting indirectly in a larger litter size. 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P. ; Avdi, M.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-a582t-140b634838300b666abc45867f2dc884a495f8037b069d2c92b9b51b57d98333</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2016</creationdate><topic>Alleles</topic><topic>Deoxyribonucleic acid</topic><topic>DNA</topic><topic>Gene frequency</topic><topic>Gene polymorphism</topic><topic>Genetic aspects</topic><topic>Genetic testing</topic><topic>Genotype</topic><topic>Genotype & phenotype</topic><topic>Hogs</topic><topic>Litter size</topic><topic>Marker-assisted selection</topic><topic>Parity</topic><topic>Polymerase chain reaction</topic><topic>Polymorphism</topic><topic>Population</topic><topic>Protein binding</topic><topic>Restriction fragment length polymorphism</topic><topic>Retinol-binding protein</topic><topic>Single nucleotide polymorphisms</topic><topic>Single-nucleotide polymorphism</topic><topic>Statistical analysis</topic><topic>Swine</topic><topic>Vitamin A</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Marantidis, A.</creatorcontrib><creatorcontrib>Laliotis, G. 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P.</au><au>Avdi, M.</au><au>Doggett, Norman A.</au><au>Norman A Doggett</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Association of RBP4 Genotype with Phenotypic Reproductive Traits of Sows</atitle><jtitle>Genetics Research International</jtitle><addtitle>Genet Res Int</addtitle><date>2016-01-01</date><risdate>2016</risdate><volume>2016</volume><spage>16</spage><epage>20</epage><pages>16-20</pages><issn>2090-3154</issn><issn>2090-3162</issn><eissn>2090-3162</eissn><abstract>PCR-RFLP was applied to a commercial crossbred pig population in order to investigate the association between polymorphism (SNP) of Retinol-binding protein 4 (RBP4) gene and reproductive performance. 400 sows were genotyped and 2000 records of reproductive traits were used in order to retrieve information about the allele frequencies and the association of the RBP4 gene with main reproductive characteristics of the population. A deviation from the Hardy-Weinberg equilibrium was observed as a result of the AB genotype excess. In addition, the AA genotype saw statistically significant higher values of (i) the total number of born piglets ( p < 0.05 ), (ii) the number of piglets born alive ( p < 0.01 ), and (iii) the number of weaned piglets ( p < 0.01 ). The number of the mummified piglets and the number of the piglets born dead did not differ between the various RBP4 genotypes. Interestingly, the AA genotype had a negative impact ( p < 0.05 ) on the number of piglets born dead, resulting indirectly in a larger litter size. In conclusion, the AA genotype and in extension the A allele of RBP4 gene are in favor of producing larger litter size, suggesting that the RBP4 gene may be used in Marker-Assisted Selection (MAS) programs for a rapid improvement of the reproductive characteristics in pigs.</abstract><cop>Egypt</cop><pub>Hindawi Limiteds</pub><pmid>26885398</pmid><doi>10.1155/2016/4940532</doi><tpages>5</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Alleles Deoxyribonucleic acid DNA Gene frequency Gene polymorphism Genetic aspects Genetic testing Genotype Genotype & phenotype Hogs Litter size Marker-assisted selection Parity Polymerase chain reaction Polymorphism Population Protein binding Restriction fragment length polymorphism Retinol-binding protein Single nucleotide polymorphisms Single-nucleotide polymorphism Statistical analysis Swine Vitamin A |
title | Association of RBP4 Genotype with Phenotypic Reproductive Traits of Sows |
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