5-hydroxymethylcytosine loss is associated with poor prognosis for patients with WHO grade II diffuse astrocytomas

• Published in: Scientific reports 2016-02, Vol.6 (1), p.20882-20882, Article 20882
• Main Authors: Zhang, Feng, Liu, Yifan, Zhang, Zhiwen, Li, Jie, Wan, Yi, Zhang, Liying, Wang, Yangmei, Li, Xia, Xu, Yuqiao, Fu, Xin, Zhang, Xiumin, Zhang, Ming, Zhang, Zhekai, Zhang, Jing, Yan, Qingguo, Ye, Jing, Wang, Zhe, Chen, Charlie Degui, Lin, Wei, Li, Qing
• Format: Article
• Language: English
• Subjects: 13/51; 5-Methylcytosine - analogs & derivatives; 692/308/1892; 692/4028/67; 692/53/2422; Adolescent; Adult; Aged; Antibodies - chemistry; Astrocytoma; Astrocytoma - diagnosis; Astrocytoma - metabolism; Astrocytoma - mortality; Astrocytoma - pathology; Biomarkers, Tumor - genetics; Biomarkers, Tumor - metabolism; Brain - metabolism; Brain - pathology; Brain tumors; Central Nervous System Neoplasms - diagnosis; Central Nervous System Neoplasms - metabolism; Central Nervous System Neoplasms - mortality; Central Nervous System Neoplasms - pathology; Cytosine - analogs & derivatives; Cytosine - metabolism; DNA sequencing; Enzymes; Female; Glioma; Humanities and Social Sciences; Humans; Immunohistochemistry; Isocitrate Dehydrogenase - genetics; Isocitrate Dehydrogenase - metabolism; Ki-67 Antigen - genetics; Ki-67 Antigen - metabolism; Male; Medical prognosis; Middle Aged; multidisciplinary; Multivariate analysis; Mutation; Neoplasm Grading; Prognosis; Science; Science (multidisciplinary); Spinal Cord - metabolism; Spinal Cord - pathology; Survival; Survival Analysis
• ISSN: 2045-2322; 2045-2322
• DOI: 10.1038/srep20882

Currently, the reliable prognostic biomarkers for WHO grade II diffuse astrocytomas (DA) are still limited. We investigated the relations between the level of 5-Hydroxymethylcytosine (5hmC), an oxidated production of 5-methylcytosine (5mC) by the ten eleven translocated (TET) enzymes, and clinicopathological features of glioma patients. With an identified anti-5hmC antibody, we performed immunohistochemistry in 287 glioma cases. We detected that 5hmC variably reduced in most gliomas and 5hmC reduction was closely associated with higher pathological grades and shortened survival of glioma patients. In multivariate analysis, 5hmC had no independent prognostic value in the entire patient cohort. However, multivariate analysis within subtypes of gliomas revealed that 5hmC was still a prognostic marker confined to DA. In addition, we detected that IDH1 mutation by DNA sequencing was associated with favorable survival within DA. Lastly, we detected that the combination of 5hmC/KI67 was a useful prognostic marker for restratification of DA.