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Spirochaetes dominate the microbial community associated with the red coral Corallium rubrum on a broad geographic scale
Mass mortality events in populations of the iconic red coral Corallium rubrum have been related to seawater temperature anomalies that may have triggered microbial disease development. However, very little is known about the bacterial community associated with the red coral. We therefore aimed to pr...
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Published in: | Scientific reports 2016-06, Vol.6 (1), p.27277-27277, Article 27277 |
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description | Mass mortality events in populations of the iconic red coral
Corallium rubrum
have been related to seawater temperature anomalies that may have triggered microbial disease development. However, very little is known about the bacterial community associated with the red coral. We therefore aimed to provide insight into this species’ bacterial assemblages using Illumina MiSeq sequencing of 16S rRNA gene amplicons generated from samples collected at five locations distributed across the western Mediterranean Sea. Twelve bacterial species were found to be consistently associated with the red coral, forming a core microbiome that accounted for 94.6% of the overall bacterial community. This core microbiome was particularly dominated by bacteria of the orders Spirochaetales and Oceanospirillales, in particular the ME2 family. Bacteria belonging to these orders have been implicated in nutrient cycling, including nitrogen, carbon and sulfur. While Oceanospirillales are common symbionts of marine invertebrates, our results identify members of the Spirochaetales as other important dominant symbiotic bacterial associates within Anthozoans. |
doi_str_mv | 10.1038/srep27277 |
format | article |
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Corallium rubrum
have been related to seawater temperature anomalies that may have triggered microbial disease development. However, very little is known about the bacterial community associated with the red coral. We therefore aimed to provide insight into this species’ bacterial assemblages using Illumina MiSeq sequencing of 16S rRNA gene amplicons generated from samples collected at five locations distributed across the western Mediterranean Sea. Twelve bacterial species were found to be consistently associated with the red coral, forming a core microbiome that accounted for 94.6% of the overall bacterial community. This core microbiome was particularly dominated by bacteria of the orders Spirochaetales and Oceanospirillales, in particular the ME2 family. Bacteria belonging to these orders have been implicated in nutrient cycling, including nitrogen, carbon and sulfur. While Oceanospirillales are common symbionts of marine invertebrates, our results identify members of the Spirochaetales as other important dominant symbiotic bacterial associates within Anthozoans.</description><identifier>ISSN: 2045-2322</identifier><identifier>EISSN: 2045-2322</identifier><identifier>DOI: 10.1038/srep27277</identifier><identifier>PMID: 27263657</identifier><language>eng</language><publisher>London: Nature Publishing Group UK</publisher><subject>631/158/855 ; 631/326/2565/855 ; Animals ; Anthozoa - microbiology ; Bacteria ; Chemical analysis ; DNA, Bacterial - genetics ; DNA, Ribosomal - genetics ; High-Throughput Nucleotide Sequencing - methods ; Humanities and Social Sciences ; Marine invertebrates ; Mediterranean Sea ; Microbiota ; multidisciplinary ; Nutrient cycles ; Oceanospirillaceae - classification ; Oceanospirillaceae - genetics ; Oceanospirillaceae - isolation & purification ; Phylogeny ; RNA, Ribosomal, 16S - genetics ; Science ; Science (multidisciplinary) ; Seawater ; Sequence Analysis, DNA - methods ; Spirochaeta - classification ; Spirochaeta - genetics ; Spirochaeta - isolation & purification ; Sulfur ; Symbiosis ; Taxonomy ; Water analysis ; Water temperature</subject><ispartof>Scientific reports, 2016-06, Vol.6 (1), p.27277-27277, Article 27277</ispartof><rights>The Author(s) 2016</rights><rights>Copyright Nature Publishing Group Jun 2016</rights><rights>Copyright © 2016, Macmillan Publishers Limited 2016 Macmillan Publishers Limited</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c438t-b2dcc91f32dcda563d99675d98147d057c73736f92d6524166e726984968a4093</citedby><cites>FETCH-LOGICAL-c438t-b2dcc91f32dcda563d99675d98147d057c73736f92d6524166e726984968a4093</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.proquest.com/docview/1794130642/fulltextPDF?pq-origsite=primo$$EPDF$$P50$$Gproquest$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.proquest.com/docview/1794130642?pq-origsite=primo$$EHTML$$P50$$Gproquest$$Hfree_for_read</linktohtml><link.rule.ids>230,314,724,777,781,882,25734,27905,27906,36993,36994,44571,53772,53774,74875</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/27263657$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>van de Water, Jeroen A. J. M.</creatorcontrib><creatorcontrib>Melkonian, Rémy</creatorcontrib><creatorcontrib>Junca, Howard</creatorcontrib><creatorcontrib>Voolstra, Christian R.</creatorcontrib><creatorcontrib>Reynaud, Stéphanie</creatorcontrib><creatorcontrib>Allemand, Denis</creatorcontrib><creatorcontrib>Ferrier-Pagès, Christine</creatorcontrib><title>Spirochaetes dominate the microbial community associated with the red coral Corallium rubrum on a broad geographic scale</title><title>Scientific reports</title><addtitle>Sci Rep</addtitle><addtitle>Sci Rep</addtitle><description>Mass mortality events in populations of the iconic red coral
Corallium rubrum
have been related to seawater temperature anomalies that may have triggered microbial disease development. However, very little is known about the bacterial community associated with the red coral. We therefore aimed to provide insight into this species’ bacterial assemblages using Illumina MiSeq sequencing of 16S rRNA gene amplicons generated from samples collected at five locations distributed across the western Mediterranean Sea. Twelve bacterial species were found to be consistently associated with the red coral, forming a core microbiome that accounted for 94.6% of the overall bacterial community. This core microbiome was particularly dominated by bacteria of the orders Spirochaetales and Oceanospirillales, in particular the ME2 family. Bacteria belonging to these orders have been implicated in nutrient cycling, including nitrogen, carbon and sulfur. While Oceanospirillales are common symbionts of marine invertebrates, our results identify members of the Spirochaetales as other important dominant symbiotic bacterial associates within Anthozoans.</description><subject>631/158/855</subject><subject>631/326/2565/855</subject><subject>Animals</subject><subject>Anthozoa - microbiology</subject><subject>Bacteria</subject><subject>Chemical analysis</subject><subject>DNA, Bacterial - genetics</subject><subject>DNA, Ribosomal - genetics</subject><subject>High-Throughput Nucleotide Sequencing - methods</subject><subject>Humanities and Social Sciences</subject><subject>Marine invertebrates</subject><subject>Mediterranean Sea</subject><subject>Microbiota</subject><subject>multidisciplinary</subject><subject>Nutrient cycles</subject><subject>Oceanospirillaceae - classification</subject><subject>Oceanospirillaceae - genetics</subject><subject>Oceanospirillaceae - isolation & purification</subject><subject>Phylogeny</subject><subject>RNA, Ribosomal, 16S - genetics</subject><subject>Science</subject><subject>Science (multidisciplinary)</subject><subject>Seawater</subject><subject>Sequence Analysis, DNA - methods</subject><subject>Spirochaeta - classification</subject><subject>Spirochaeta - genetics</subject><subject>Spirochaeta - isolation & purification</subject><subject>Sulfur</subject><subject>Symbiosis</subject><subject>Taxonomy</subject><subject>Water analysis</subject><subject>Water temperature</subject><issn>2045-2322</issn><issn>2045-2322</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2016</creationdate><recordtype>article</recordtype><sourceid>PIMPY</sourceid><recordid>eNplkV1LHDEUhoNUVNQL_4AEvGkL2-ZrkslNoSz9AsEL63XIJNmdyMxkTGZs_fc97tplbXORk3Ae3rwnL0IXlHyghNcfSw4jU0ypA3TCiKgWjDP2Zu98jM5LuSewKqYF1UfoGHjJZaVO0O_bMebkWhumULBPfRzsFPDUBtxHl1MTbYdd6vt5iNMTtqUkF4Hw-Fec2g2X4eJSBm75vHdx7nGemwwlDdjiJifr8TqkdbZjGx0uznbhDB2ubFfC-Us9RXdfv_xcfl9c33z7sfx8vXCC19OiYd45TVccqreV5F5rqSqvayqUJ5VyiisuV5p5WTFBpQwwm66FlrUVRPNT9GmrO85NH7wLwwQmzZhjb_OTSTaa150htmadHo2oNVdEgMDbF4GcHuZQJtPH4kLX2SGkuRiqtBBS0w169Q96n-Y8wHgbinIiBQPq3ZaC7y2Q3mpnhhLzHKnZRQrs5b77Hfk3QADeb4ECrWEd8t6T_6n9Abewq_s</recordid><startdate>20160606</startdate><enddate>20160606</enddate><creator>van de Water, Jeroen A. 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J. M.</au><au>Melkonian, Rémy</au><au>Junca, Howard</au><au>Voolstra, Christian R.</au><au>Reynaud, Stéphanie</au><au>Allemand, Denis</au><au>Ferrier-Pagès, Christine</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Spirochaetes dominate the microbial community associated with the red coral Corallium rubrum on a broad geographic scale</atitle><jtitle>Scientific reports</jtitle><stitle>Sci Rep</stitle><addtitle>Sci Rep</addtitle><date>2016-06-06</date><risdate>2016</risdate><volume>6</volume><issue>1</issue><spage>27277</spage><epage>27277</epage><pages>27277-27277</pages><artnum>27277</artnum><issn>2045-2322</issn><eissn>2045-2322</eissn><abstract>Mass mortality events in populations of the iconic red coral
Corallium rubrum
have been related to seawater temperature anomalies that may have triggered microbial disease development. However, very little is known about the bacterial community associated with the red coral. We therefore aimed to provide insight into this species’ bacterial assemblages using Illumina MiSeq sequencing of 16S rRNA gene amplicons generated from samples collected at five locations distributed across the western Mediterranean Sea. Twelve bacterial species were found to be consistently associated with the red coral, forming a core microbiome that accounted for 94.6% of the overall bacterial community. This core microbiome was particularly dominated by bacteria of the orders Spirochaetales and Oceanospirillales, in particular the ME2 family. Bacteria belonging to these orders have been implicated in nutrient cycling, including nitrogen, carbon and sulfur. While Oceanospirillales are common symbionts of marine invertebrates, our results identify members of the Spirochaetales as other important dominant symbiotic bacterial associates within Anthozoans.</abstract><cop>London</cop><pub>Nature Publishing Group UK</pub><pmid>27263657</pmid><doi>10.1038/srep27277</doi><tpages>1</tpages><oa>free_for_read</oa></addata></record> |
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subjects | 631/158/855 631/326/2565/855 Animals Anthozoa - microbiology Bacteria Chemical analysis DNA, Bacterial - genetics DNA, Ribosomal - genetics High-Throughput Nucleotide Sequencing - methods Humanities and Social Sciences Marine invertebrates Mediterranean Sea Microbiota multidisciplinary Nutrient cycles Oceanospirillaceae - classification Oceanospirillaceae - genetics Oceanospirillaceae - isolation & purification Phylogeny RNA, Ribosomal, 16S - genetics Science Science (multidisciplinary) Seawater Sequence Analysis, DNA - methods Spirochaeta - classification Spirochaeta - genetics Spirochaeta - isolation & purification Sulfur Symbiosis Taxonomy Water analysis Water temperature |
title | Spirochaetes dominate the microbial community associated with the red coral Corallium rubrum on a broad geographic scale |
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