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A Panel of TrpB Biocatalysts Derived from Tryptophan Synthase through the Transfer of Mutations that Mimic Allosteric Activation
Naturally occurring enzyme homologues often display highly divergent activity with non‐natural substrates. Exploiting this diversity with enzymes engineered for new or altered function, however, is laborious because the engineering must be replicated for each homologue. A small set of mutations of t...
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Published in: | Angewandte Chemie International Edition 2016-09, Vol.55 (38), p.11577-11581 |
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description | Naturally occurring enzyme homologues often display highly divergent activity with non‐natural substrates. Exploiting this diversity with enzymes engineered for new or altered function, however, is laborious because the engineering must be replicated for each homologue. A small set of mutations of the tryptophan synthase β‐subunit (TrpB) from Pyrococcus furiosus, which mimics the activation afforded by binding of the α‐subunit, was demonstrated to have a similar activating effect in different TrpB homologues with as little as 57 % sequence identity. Kinetic and spectroscopic analyses indicate that the mutations function through the same mechanism: mimicry of α‐subunit binding. From these enzymes, we identified a new TrpB catalyst that displays a remarkably broad activity profile in the synthesis of 5‐substituted tryptophans. This demonstrates that allosteric activation can be recapitulated throughout a protein family to explore natural sequence diversity for desirable biocatalytic transformations.
Better off alone: The tryptophan synthase enzyme complex is active toward a number of indole analogues. The β‐subunit (TrpB) performs the synthetically useful reaction but requires the α‐subunit to be fully active. Mutations from a re‐activated TrpB variant from Pyrococcus furiosus were transferred into homologous TrpB enzymes to generate a panel of stand‐alone TrpB catalysts, one of which is useful for making 5‐substituted tryptophans, an important biological motif. |
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Better off alone: The tryptophan synthase enzyme complex is active toward a number of indole analogues. The β‐subunit (TrpB) performs the synthetically useful reaction but requires the α‐subunit to be fully active. Mutations from a re‐activated TrpB variant from Pyrococcus furiosus were transferred into homologous TrpB enzymes to generate a panel of stand‐alone TrpB catalysts, one of which is useful for making 5‐substituted tryptophans, an important biological motif.</description><edition>International ed. in English</edition><identifier>ISSN: 1433-7851</identifier><identifier>EISSN: 1521-3773</identifier><identifier>DOI: 10.1002/anie.201606242</identifier><identifier>PMID: 27510733</identifier><identifier>CODEN: ACIEAY</identifier><language>eng</language><publisher>Germany: Blackwell Publishing Ltd</publisher><subject>Activation ; Allosteric properties ; Allosteric Regulation ; allostery ; Binding ; Biocatalysis ; Biocatalysts ; Catalysts ; Chemical synthesis ; Displays ; Engineering ; Enzymes ; Homology ; Kinetics ; Mimicry ; Mutagenesis, Site-Directed ; Mutation ; Protein Binding ; Protein Engineering ; Protein Subunits - chemistry ; Protein Subunits - genetics ; Protein Subunits - metabolism ; Pyrococcus furiosus - enzymology ; Spectroscopic analysis ; Substrates ; Transformations ; Tryptophan ; Tryptophan synthase ; Tryptophan Synthase - chemistry ; Tryptophan Synthase - genetics ; Tryptophan Synthase - metabolism</subject><ispartof>Angewandte Chemie International Edition, 2016-09, Vol.55 (38), p.11577-11581</ispartof><rights>2016 WILEY‐VCH Verlag GmbH & Co. KGaA, Weinheim</rights><rights>2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.</rights><rights>2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c5712-c2d0c7839a6feecf1ea1cf3a19358f870abb97c561c099a3706f8751e2af3c503</citedby><cites>FETCH-LOGICAL-c5712-c2d0c7839a6feecf1ea1cf3a19358f870abb97c561c099a3706f8751e2af3c503</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>230,314,778,782,883,27911,27912</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/27510733$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Murciano-Calles, Javier</creatorcontrib><creatorcontrib>Romney, David K.</creatorcontrib><creatorcontrib>Brinkmann-Chen, Sabine</creatorcontrib><creatorcontrib>Buller, Andrew R.</creatorcontrib><creatorcontrib>Arnold, Frances H.</creatorcontrib><title>A Panel of TrpB Biocatalysts Derived from Tryptophan Synthase through the Transfer of Mutations that Mimic Allosteric Activation</title><title>Angewandte Chemie International Edition</title><addtitle>Angew. Chem. Int. Ed</addtitle><description>Naturally occurring enzyme homologues often display highly divergent activity with non‐natural substrates. Exploiting this diversity with enzymes engineered for new or altered function, however, is laborious because the engineering must be replicated for each homologue. A small set of mutations of the tryptophan synthase β‐subunit (TrpB) from Pyrococcus furiosus, which mimics the activation afforded by binding of the α‐subunit, was demonstrated to have a similar activating effect in different TrpB homologues with as little as 57 % sequence identity. Kinetic and spectroscopic analyses indicate that the mutations function through the same mechanism: mimicry of α‐subunit binding. From these enzymes, we identified a new TrpB catalyst that displays a remarkably broad activity profile in the synthesis of 5‐substituted tryptophans. This demonstrates that allosteric activation can be recapitulated throughout a protein family to explore natural sequence diversity for desirable biocatalytic transformations.
Better off alone: The tryptophan synthase enzyme complex is active toward a number of indole analogues. The β‐subunit (TrpB) performs the synthetically useful reaction but requires the α‐subunit to be fully active. Mutations from a re‐activated TrpB variant from Pyrococcus furiosus were transferred into homologous TrpB enzymes to generate a panel of stand‐alone TrpB catalysts, one of which is useful for making 5‐substituted tryptophans, an important biological motif.</description><subject>Activation</subject><subject>Allosteric properties</subject><subject>Allosteric Regulation</subject><subject>allostery</subject><subject>Binding</subject><subject>Biocatalysis</subject><subject>Biocatalysts</subject><subject>Catalysts</subject><subject>Chemical synthesis</subject><subject>Displays</subject><subject>Engineering</subject><subject>Enzymes</subject><subject>Homology</subject><subject>Kinetics</subject><subject>Mimicry</subject><subject>Mutagenesis, Site-Directed</subject><subject>Mutation</subject><subject>Protein Binding</subject><subject>Protein Engineering</subject><subject>Protein Subunits - chemistry</subject><subject>Protein Subunits - genetics</subject><subject>Protein Subunits - metabolism</subject><subject>Pyrococcus furiosus - enzymology</subject><subject>Spectroscopic analysis</subject><subject>Substrates</subject><subject>Transformations</subject><subject>Tryptophan</subject><subject>Tryptophan synthase</subject><subject>Tryptophan Synthase - chemistry</subject><subject>Tryptophan Synthase - genetics</subject><subject>Tryptophan Synthase - metabolism</subject><issn>1433-7851</issn><issn>1521-3773</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2016</creationdate><recordtype>article</recordtype><recordid>eNqFkk1v1DAQhiMEoqVw5YgsceGSxR_x1wVpW9rSaltAFDhaXq_TuCRxsJ2F3PjpeNmyKhzgNCO_z7ya8UxRPEVwhiDEL3Xv7AxDxCDDFb5X7COKUUk4J_dzXhFSckHRXvEoxpvMCwHZw2IPc4ogJ2S_-DEH73RvW-BrcBWGQ3DovNFJt1NMEby2wa3tCtTBd1mehuSHRvfgw9SnRkcLUhP8eN3kaLOu-1jbsLG6GJNOzvcxKzqBC9c5A-Zt62PKljk1ya1_EY-LB7Vuo31yGw-KjyfHV0dvysXb07Oj-aI0lCNcGryChgsiNautNTWyGpmaaCQJFbXgUC-XkhvKkIFSasIhy68UWaxrYigkB8Wrre8wLju7MrZPQbdqCK7TYVJeO_Wn0rtGXfu1ohBVlFfZ4MWtQfBfRxuT6lw0tm3z9_kxKiQQpwxiJDL6_C_0xo-hz-MpJKHAnFWS_JMSiHEppMSZmm0pE3yMwda7lhFUmxNQmxNQuxPIBc_uDrrDf-88A3ILfHOtnf5jp-aXZ8d3zcttrcuL_L6r1eGLYpxwqj5fnqrzxftzIk-w-kR-AkDXzis</recordid><startdate>20160912</startdate><enddate>20160912</enddate><creator>Murciano-Calles, Javier</creator><creator>Romney, David K.</creator><creator>Brinkmann-Chen, Sabine</creator><creator>Buller, Andrew R.</creator><creator>Arnold, Frances H.</creator><general>Blackwell Publishing Ltd</general><general>Wiley Subscription Services, Inc</general><scope>BSCLL</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7TM</scope><scope>K9.</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20160912</creationdate><title>A Panel of TrpB Biocatalysts Derived from Tryptophan Synthase through the Transfer of Mutations that Mimic Allosteric Activation</title><author>Murciano-Calles, Javier ; Romney, David K. ; Brinkmann-Chen, Sabine ; Buller, Andrew R. ; Arnold, Frances H.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c5712-c2d0c7839a6feecf1ea1cf3a19358f870abb97c561c099a3706f8751e2af3c503</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2016</creationdate><topic>Activation</topic><topic>Allosteric properties</topic><topic>Allosteric Regulation</topic><topic>allostery</topic><topic>Binding</topic><topic>Biocatalysis</topic><topic>Biocatalysts</topic><topic>Catalysts</topic><topic>Chemical synthesis</topic><topic>Displays</topic><topic>Engineering</topic><topic>Enzymes</topic><topic>Homology</topic><topic>Kinetics</topic><topic>Mimicry</topic><topic>Mutagenesis, Site-Directed</topic><topic>Mutation</topic><topic>Protein Binding</topic><topic>Protein Engineering</topic><topic>Protein Subunits - chemistry</topic><topic>Protein Subunits - genetics</topic><topic>Protein Subunits - metabolism</topic><topic>Pyrococcus furiosus - enzymology</topic><topic>Spectroscopic analysis</topic><topic>Substrates</topic><topic>Transformations</topic><topic>Tryptophan</topic><topic>Tryptophan synthase</topic><topic>Tryptophan Synthase - chemistry</topic><topic>Tryptophan Synthase - genetics</topic><topic>Tryptophan Synthase - metabolism</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Murciano-Calles, Javier</creatorcontrib><creatorcontrib>Romney, David K.</creatorcontrib><creatorcontrib>Brinkmann-Chen, Sabine</creatorcontrib><creatorcontrib>Buller, Andrew R.</creatorcontrib><creatorcontrib>Arnold, Frances H.</creatorcontrib><collection>Istex</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Nucleic Acids Abstracts</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Angewandte Chemie International Edition</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Murciano-Calles, Javier</au><au>Romney, David K.</au><au>Brinkmann-Chen, Sabine</au><au>Buller, Andrew R.</au><au>Arnold, Frances H.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>A Panel of TrpB Biocatalysts Derived from Tryptophan Synthase through the Transfer of Mutations that Mimic Allosteric Activation</atitle><jtitle>Angewandte Chemie International Edition</jtitle><addtitle>Angew. Chem. Int. Ed</addtitle><date>2016-09-12</date><risdate>2016</risdate><volume>55</volume><issue>38</issue><spage>11577</spage><epage>11581</epage><pages>11577-11581</pages><issn>1433-7851</issn><eissn>1521-3773</eissn><coden>ACIEAY</coden><abstract>Naturally occurring enzyme homologues often display highly divergent activity with non‐natural substrates. Exploiting this diversity with enzymes engineered for new or altered function, however, is laborious because the engineering must be replicated for each homologue. A small set of mutations of the tryptophan synthase β‐subunit (TrpB) from Pyrococcus furiosus, which mimics the activation afforded by binding of the α‐subunit, was demonstrated to have a similar activating effect in different TrpB homologues with as little as 57 % sequence identity. Kinetic and spectroscopic analyses indicate that the mutations function through the same mechanism: mimicry of α‐subunit binding. From these enzymes, we identified a new TrpB catalyst that displays a remarkably broad activity profile in the synthesis of 5‐substituted tryptophans. This demonstrates that allosteric activation can be recapitulated throughout a protein family to explore natural sequence diversity for desirable biocatalytic transformations.
Better off alone: The tryptophan synthase enzyme complex is active toward a number of indole analogues. The β‐subunit (TrpB) performs the synthetically useful reaction but requires the α‐subunit to be fully active. Mutations from a re‐activated TrpB variant from Pyrococcus furiosus were transferred into homologous TrpB enzymes to generate a panel of stand‐alone TrpB catalysts, one of which is useful for making 5‐substituted tryptophans, an important biological motif.</abstract><cop>Germany</cop><pub>Blackwell Publishing Ltd</pub><pmid>27510733</pmid><doi>10.1002/anie.201606242</doi><tpages>5</tpages><edition>International ed. in English</edition><oa>free_for_read</oa></addata></record> |
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subjects | Activation Allosteric properties Allosteric Regulation allostery Binding Biocatalysis Biocatalysts Catalysts Chemical synthesis Displays Engineering Enzymes Homology Kinetics Mimicry Mutagenesis, Site-Directed Mutation Protein Binding Protein Engineering Protein Subunits - chemistry Protein Subunits - genetics Protein Subunits - metabolism Pyrococcus furiosus - enzymology Spectroscopic analysis Substrates Transformations Tryptophan Tryptophan synthase Tryptophan Synthase - chemistry Tryptophan Synthase - genetics Tryptophan Synthase - metabolism |
title | A Panel of TrpB Biocatalysts Derived from Tryptophan Synthase through the Transfer of Mutations that Mimic Allosteric Activation |
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