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Differences in glycosyltransferase family 61 accompany variation in seed coat mucilage composition in Plantago spp
Xylans are the most abundant non-cellulosic polysaccharide found in plant cell walls. A diverse range of xylan structures influence tissue function during growth and development. Despite the abundance of xylans in nature, details of the genes and biochemical pathways controlling their biosynthesis a...
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Published in: | Journal of experimental botany 2016-12, Vol.67 (22), p.6481-6495 |
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container_title | Journal of experimental botany |
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creator | Phan, Jana L. Tucker, Matthew R. Khor, Shi Fang Shirley, Neil Lahnstein, Jelle Beahan, Cherie Bacic, Antony Burton, Rachel A. |
description | Xylans are the most abundant non-cellulosic polysaccharide found in plant cell walls. A diverse range of xylan structures influence tissue function during growth and development. Despite the abundance of xylans in nature, details of the genes and biochemical pathways controlling their biosynthesis are lacking. In this study we have utilized natural variation within the Plantago genus to examine variation in heteroxylan composition and structure in seed coat mucilage. Compositional assays were combined with analysis of the glycosyltransferase family 61 (GT61) family during seed coat development, with the aim of identifying GT61 sequences participating in xylan backbone substitution. The results reveal natural variation in heteroxylan content and structure, particularly in P. ovata and P. cunninghamii, species which show a similar amount of heteroxylan but different backbone substitution profiles. Analysis of the GT61 family identified specific sequences co-expressed with IRREGULAR XYLEM 10 genes, which encode putative xylan synthases, revealing a close temporal association between xylan synthesis and substitution. Moreover, in P. ovata, several abundant GT61 sequences appear to lack orthologues in P. cunninghamii. Our results indicate that natural variation in Plantago species can be exploited to reveal novel details of seed coat development and polysaccharide biosynthetic pathways. |
doi_str_mv | 10.1093/jxb/erw424 |
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A diverse range of xylan structures influence tissue function during growth and development. Despite the abundance of xylans in nature, details of the genes and biochemical pathways controlling their biosynthesis are lacking. In this study we have utilized natural variation within the Plantago genus to examine variation in heteroxylan composition and structure in seed coat mucilage. Compositional assays were combined with analysis of the glycosyltransferase family 61 (GT61) family during seed coat development, with the aim of identifying GT61 sequences participating in xylan backbone substitution. The results reveal natural variation in heteroxylan content and structure, particularly in P. ovata and P. cunninghamii, species which show a similar amount of heteroxylan but different backbone substitution profiles. Analysis of the GT61 family identified specific sequences co-expressed with IRREGULAR XYLEM 10 genes, which encode putative xylan synthases, revealing a close temporal association between xylan synthesis and substitution. Moreover, in P. ovata, several abundant GT61 sequences appear to lack orthologues in P. cunninghamii. Our results indicate that natural variation in Plantago species can be exploited to reveal novel details of seed coat development and polysaccharide biosynthetic pathways.</description><identifier>ISSN: 0022-0957</identifier><identifier>EISSN: 1460-2431</identifier><identifier>DOI: 10.1093/jxb/erw424</identifier><identifier>PMID: 27856710</identifier><language>eng</language><publisher>England: Oxford University Press</publisher><subject>Glycosyltransferases - genetics ; Glycosyltransferases - metabolism ; Microscopy ; Microscopy, Electron, Scanning ; Phylogeny ; Plant Mucilage - analysis ; Plant Mucilage - metabolism ; Plantago - enzymology ; Plantago - genetics ; Plantago - metabolism ; Plantago - physiology ; Polymerase Chain Reaction ; RESEARCH PAPER ; Seeds - chemistry ; Seeds - enzymology ; Seeds - growth & development ; Seeds - physiology</subject><ispartof>Journal of experimental botany, 2016-12, Vol.67 (22), p.6481-6495</ispartof><rights>The Author 2016</rights><rights>The Author 2016. Published by Oxford University Press on behalf of the Society for Experimental Biology.</rights><rights>The Author 2016. Published by Oxford University Press on behalf of the Society for Experimental Biology. 2016</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c364t-ea7f97648cacd91b1422040e9563054fccc24f866a3c07cc56fa03390824a4963</citedby><cites>FETCH-LOGICAL-c364t-ea7f97648cacd91b1422040e9563054fccc24f866a3c07cc56fa03390824a4963</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.jstor.org/stable/pdf/26391447$$EPDF$$P50$$Gjstor$$H</linktopdf><linktohtml>$$Uhttps://www.jstor.org/stable/26391447$$EHTML$$P50$$Gjstor$$H</linktohtml><link.rule.ids>230,314,776,780,881,27901,27902,58213,58446</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/27856710$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Phan, Jana L.</creatorcontrib><creatorcontrib>Tucker, Matthew R.</creatorcontrib><creatorcontrib>Khor, Shi Fang</creatorcontrib><creatorcontrib>Shirley, Neil</creatorcontrib><creatorcontrib>Lahnstein, Jelle</creatorcontrib><creatorcontrib>Beahan, Cherie</creatorcontrib><creatorcontrib>Bacic, Antony</creatorcontrib><creatorcontrib>Burton, Rachel A.</creatorcontrib><title>Differences in glycosyltransferase family 61 accompany variation in seed coat mucilage composition in Plantago spp</title><title>Journal of experimental botany</title><addtitle>J Exp Bot</addtitle><description>Xylans are the most abundant non-cellulosic polysaccharide found in plant cell walls. A diverse range of xylan structures influence tissue function during growth and development. Despite the abundance of xylans in nature, details of the genes and biochemical pathways controlling their biosynthesis are lacking. In this study we have utilized natural variation within the Plantago genus to examine variation in heteroxylan composition and structure in seed coat mucilage. Compositional assays were combined with analysis of the glycosyltransferase family 61 (GT61) family during seed coat development, with the aim of identifying GT61 sequences participating in xylan backbone substitution. The results reveal natural variation in heteroxylan content and structure, particularly in P. ovata and P. cunninghamii, species which show a similar amount of heteroxylan but different backbone substitution profiles. Analysis of the GT61 family identified specific sequences co-expressed with IRREGULAR XYLEM 10 genes, which encode putative xylan synthases, revealing a close temporal association between xylan synthesis and substitution. Moreover, in P. ovata, several abundant GT61 sequences appear to lack orthologues in P. cunninghamii. Our results indicate that natural variation in Plantago species can be exploited to reveal novel details of seed coat development and polysaccharide biosynthetic pathways.</description><subject>Glycosyltransferases - genetics</subject><subject>Glycosyltransferases - metabolism</subject><subject>Microscopy</subject><subject>Microscopy, Electron, Scanning</subject><subject>Phylogeny</subject><subject>Plant Mucilage - analysis</subject><subject>Plant Mucilage - metabolism</subject><subject>Plantago - enzymology</subject><subject>Plantago - genetics</subject><subject>Plantago - metabolism</subject><subject>Plantago - physiology</subject><subject>Polymerase Chain Reaction</subject><subject>RESEARCH PAPER</subject><subject>Seeds - chemistry</subject><subject>Seeds - enzymology</subject><subject>Seeds - growth & development</subject><subject>Seeds - physiology</subject><issn>0022-0957</issn><issn>1460-2431</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2016</creationdate><recordtype>article</recordtype><recordid>eNpVkc1v1DAQxS0Eokvhwh3kI0JKO_5MfEGqylelSnCAszU76yxeJXGws4X8981q20JPc3i_eTNPj7HXAs4EOHW--7s-D_mPlvoJWwltoZJaiadsBSBlBc7UJ-xFKTsAMGDMc3Yi68bYWsCK5Y-xbUMOA4XC48C33UypzN2UcSiLgCXwFvvYzdwKjkSpH3GY-Q3miFNMw2GphLDhlHDi_Z5ih9vAD1wq8Z743uEw4TbxMo4v2bMWuxJe3c1T9vPzpx-XX6vrb1-uLi-uK1JWT1XAunW11Q0hbZxYCy0laAjOWAVGt0QkddtYi4qgJjK2RVDKQSM1amfVKftw9B336z5sKAxLqM6POfaYZ58w-sfKEH_5bbrxRjTCNG4xeHdnkNPvfSiT72Oh0C1ZQtoXLxotGpBO6wV9f0Qpp1JyaB_OCPCHkvxSkj-WtMBv_3_sAb1vZQHeHIFdmVL-p1vlhNa1ugXt2pqs</recordid><startdate>20161201</startdate><enddate>20161201</enddate><creator>Phan, Jana L.</creator><creator>Tucker, Matthew R.</creator><creator>Khor, Shi Fang</creator><creator>Shirley, Neil</creator><creator>Lahnstein, Jelle</creator><creator>Beahan, Cherie</creator><creator>Bacic, Antony</creator><creator>Burton, Rachel A.</creator><general>Oxford University Press</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20161201</creationdate><title>Differences in glycosyltransferase family 61 accompany variation in seed coat mucilage composition in Plantago spp</title><author>Phan, Jana L. ; Tucker, Matthew R. ; Khor, Shi Fang ; Shirley, Neil ; Lahnstein, Jelle ; Beahan, Cherie ; Bacic, Antony ; Burton, Rachel A.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c364t-ea7f97648cacd91b1422040e9563054fccc24f866a3c07cc56fa03390824a4963</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2016</creationdate><topic>Glycosyltransferases - genetics</topic><topic>Glycosyltransferases - metabolism</topic><topic>Microscopy</topic><topic>Microscopy, Electron, Scanning</topic><topic>Phylogeny</topic><topic>Plant Mucilage - analysis</topic><topic>Plant Mucilage - metabolism</topic><topic>Plantago - enzymology</topic><topic>Plantago - genetics</topic><topic>Plantago - metabolism</topic><topic>Plantago - physiology</topic><topic>Polymerase Chain Reaction</topic><topic>RESEARCH PAPER</topic><topic>Seeds - chemistry</topic><topic>Seeds - enzymology</topic><topic>Seeds - growth & development</topic><topic>Seeds - physiology</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Phan, Jana L.</creatorcontrib><creatorcontrib>Tucker, Matthew R.</creatorcontrib><creatorcontrib>Khor, Shi Fang</creatorcontrib><creatorcontrib>Shirley, Neil</creatorcontrib><creatorcontrib>Lahnstein, Jelle</creatorcontrib><creatorcontrib>Beahan, Cherie</creatorcontrib><creatorcontrib>Bacic, Antony</creatorcontrib><creatorcontrib>Burton, Rachel A.</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Journal of experimental botany</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Phan, Jana L.</au><au>Tucker, Matthew R.</au><au>Khor, Shi Fang</au><au>Shirley, Neil</au><au>Lahnstein, Jelle</au><au>Beahan, Cherie</au><au>Bacic, Antony</au><au>Burton, Rachel A.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Differences in glycosyltransferase family 61 accompany variation in seed coat mucilage composition in Plantago spp</atitle><jtitle>Journal of experimental botany</jtitle><addtitle>J Exp Bot</addtitle><date>2016-12-01</date><risdate>2016</risdate><volume>67</volume><issue>22</issue><spage>6481</spage><epage>6495</epage><pages>6481-6495</pages><issn>0022-0957</issn><eissn>1460-2431</eissn><abstract>Xylans are the most abundant non-cellulosic polysaccharide found in plant cell walls. A diverse range of xylan structures influence tissue function during growth and development. Despite the abundance of xylans in nature, details of the genes and biochemical pathways controlling their biosynthesis are lacking. In this study we have utilized natural variation within the Plantago genus to examine variation in heteroxylan composition and structure in seed coat mucilage. Compositional assays were combined with analysis of the glycosyltransferase family 61 (GT61) family during seed coat development, with the aim of identifying GT61 sequences participating in xylan backbone substitution. The results reveal natural variation in heteroxylan content and structure, particularly in P. ovata and P. cunninghamii, species which show a similar amount of heteroxylan but different backbone substitution profiles. Analysis of the GT61 family identified specific sequences co-expressed with IRREGULAR XYLEM 10 genes, which encode putative xylan synthases, revealing a close temporal association between xylan synthesis and substitution. Moreover, in P. ovata, several abundant GT61 sequences appear to lack orthologues in P. cunninghamii. Our results indicate that natural variation in Plantago species can be exploited to reveal novel details of seed coat development and polysaccharide biosynthetic pathways.</abstract><cop>England</cop><pub>Oxford University Press</pub><pmid>27856710</pmid><doi>10.1093/jxb/erw424</doi><tpages>15</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Glycosyltransferases - genetics Glycosyltransferases - metabolism Microscopy Microscopy, Electron, Scanning Phylogeny Plant Mucilage - analysis Plant Mucilage - metabolism Plantago - enzymology Plantago - genetics Plantago - metabolism Plantago - physiology Polymerase Chain Reaction RESEARCH PAPER Seeds - chemistry Seeds - enzymology Seeds - growth & development Seeds - physiology |
title | Differences in glycosyltransferase family 61 accompany variation in seed coat mucilage composition in Plantago spp |
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