Loading…

Differences in glycosyltransferase family 61 accompany variation in seed coat mucilage composition in Plantago spp

Xylans are the most abundant non-cellulosic polysaccharide found in plant cell walls. A diverse range of xylan structures influence tissue function during growth and development. Despite the abundance of xylans in nature, details of the genes and biochemical pathways controlling their biosynthesis a...

Full description

Saved in:
Bibliographic Details
Published in:Journal of experimental botany 2016-12, Vol.67 (22), p.6481-6495
Main Authors: Phan, Jana L., Tucker, Matthew R., Khor, Shi Fang, Shirley, Neil, Lahnstein, Jelle, Beahan, Cherie, Bacic, Antony, Burton, Rachel A.
Format: Article
Language:English
Subjects:
Citations: Items that this one cites
Items that cite this one
Online Access:Get full text
Tags: Add Tag
No Tags, Be the first to tag this record!
cited_by cdi_FETCH-LOGICAL-c364t-ea7f97648cacd91b1422040e9563054fccc24f866a3c07cc56fa03390824a4963
cites cdi_FETCH-LOGICAL-c364t-ea7f97648cacd91b1422040e9563054fccc24f866a3c07cc56fa03390824a4963
container_end_page 6495
container_issue 22
container_start_page 6481
container_title Journal of experimental botany
container_volume 67
creator Phan, Jana L.
Tucker, Matthew R.
Khor, Shi Fang
Shirley, Neil
Lahnstein, Jelle
Beahan, Cherie
Bacic, Antony
Burton, Rachel A.
description Xylans are the most abundant non-cellulosic polysaccharide found in plant cell walls. A diverse range of xylan structures influence tissue function during growth and development. Despite the abundance of xylans in nature, details of the genes and biochemical pathways controlling their biosynthesis are lacking. In this study we have utilized natural variation within the Plantago genus to examine variation in heteroxylan composition and structure in seed coat mucilage. Compositional assays were combined with analysis of the glycosyltransferase family 61 (GT61) family during seed coat development, with the aim of identifying GT61 sequences participating in xylan backbone substitution. The results reveal natural variation in heteroxylan content and structure, particularly in P. ovata and P. cunninghamii, species which show a similar amount of heteroxylan but different backbone substitution profiles. Analysis of the GT61 family identified specific sequences co-expressed with IRREGULAR XYLEM 10 genes, which encode putative xylan synthases, revealing a close temporal association between xylan synthesis and substitution. Moreover, in P. ovata, several abundant GT61 sequences appear to lack orthologues in P. cunninghamii. Our results indicate that natural variation in Plantago species can be exploited to reveal novel details of seed coat development and polysaccharide biosynthetic pathways.
doi_str_mv 10.1093/jxb/erw424
format article
fullrecord <record><control><sourceid>jstor_pubme</sourceid><recordid>TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_5181589</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><jstor_id>26391447</jstor_id><sourcerecordid>26391447</sourcerecordid><originalsourceid>FETCH-LOGICAL-c364t-ea7f97648cacd91b1422040e9563054fccc24f866a3c07cc56fa03390824a4963</originalsourceid><addsrcrecordid>eNpVkc1v1DAQxS0Eokvhwh3kI0JKO_5MfEGqylelSnCAszU76yxeJXGws4X8981q20JPc3i_eTNPj7HXAs4EOHW--7s-D_mPlvoJWwltoZJaiadsBSBlBc7UJ-xFKTsAMGDMc3Yi68bYWsCK5Y-xbUMOA4XC48C33UypzN2UcSiLgCXwFvvYzdwKjkSpH3GY-Q3miFNMw2GphLDhlHDi_Z5ih9vAD1wq8Z743uEw4TbxMo4v2bMWuxJe3c1T9vPzpx-XX6vrb1-uLi-uK1JWT1XAunW11Q0hbZxYCy0laAjOWAVGt0QkddtYi4qgJjK2RVDKQSM1amfVKftw9B336z5sKAxLqM6POfaYZ58w-sfKEH_5bbrxRjTCNG4xeHdnkNPvfSiT72Oh0C1ZQtoXLxotGpBO6wV9f0Qpp1JyaB_OCPCHkvxSkj-WtMBv_3_sAb1vZQHeHIFdmVL-p1vlhNa1ugXt2pqs</addsrcrecordid><sourcetype>Open Access Repository</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>1841802944</pqid></control><display><type>article</type><title>Differences in glycosyltransferase family 61 accompany variation in seed coat mucilage composition in Plantago spp</title><source>JSTOR Archival Journals and Primary Sources Collection</source><source>Oxford Journals Online</source><creator>Phan, Jana L. ; Tucker, Matthew R. ; Khor, Shi Fang ; Shirley, Neil ; Lahnstein, Jelle ; Beahan, Cherie ; Bacic, Antony ; Burton, Rachel A.</creator><creatorcontrib>Phan, Jana L. ; Tucker, Matthew R. ; Khor, Shi Fang ; Shirley, Neil ; Lahnstein, Jelle ; Beahan, Cherie ; Bacic, Antony ; Burton, Rachel A.</creatorcontrib><description>Xylans are the most abundant non-cellulosic polysaccharide found in plant cell walls. A diverse range of xylan structures influence tissue function during growth and development. Despite the abundance of xylans in nature, details of the genes and biochemical pathways controlling their biosynthesis are lacking. In this study we have utilized natural variation within the Plantago genus to examine variation in heteroxylan composition and structure in seed coat mucilage. Compositional assays were combined with analysis of the glycosyltransferase family 61 (GT61) family during seed coat development, with the aim of identifying GT61 sequences participating in xylan backbone substitution. The results reveal natural variation in heteroxylan content and structure, particularly in P. ovata and P. cunninghamii, species which show a similar amount of heteroxylan but different backbone substitution profiles. Analysis of the GT61 family identified specific sequences co-expressed with IRREGULAR XYLEM 10 genes, which encode putative xylan synthases, revealing a close temporal association between xylan synthesis and substitution. Moreover, in P. ovata, several abundant GT61 sequences appear to lack orthologues in P. cunninghamii. Our results indicate that natural variation in Plantago species can be exploited to reveal novel details of seed coat development and polysaccharide biosynthetic pathways.</description><identifier>ISSN: 0022-0957</identifier><identifier>EISSN: 1460-2431</identifier><identifier>DOI: 10.1093/jxb/erw424</identifier><identifier>PMID: 27856710</identifier><language>eng</language><publisher>England: Oxford University Press</publisher><subject>Glycosyltransferases - genetics ; Glycosyltransferases - metabolism ; Microscopy ; Microscopy, Electron, Scanning ; Phylogeny ; Plant Mucilage - analysis ; Plant Mucilage - metabolism ; Plantago - enzymology ; Plantago - genetics ; Plantago - metabolism ; Plantago - physiology ; Polymerase Chain Reaction ; RESEARCH PAPER ; Seeds - chemistry ; Seeds - enzymology ; Seeds - growth &amp; development ; Seeds - physiology</subject><ispartof>Journal of experimental botany, 2016-12, Vol.67 (22), p.6481-6495</ispartof><rights>The Author 2016</rights><rights>The Author 2016. Published by Oxford University Press on behalf of the Society for Experimental Biology.</rights><rights>The Author 2016. Published by Oxford University Press on behalf of the Society for Experimental Biology. 2016</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c364t-ea7f97648cacd91b1422040e9563054fccc24f866a3c07cc56fa03390824a4963</citedby><cites>FETCH-LOGICAL-c364t-ea7f97648cacd91b1422040e9563054fccc24f866a3c07cc56fa03390824a4963</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.jstor.org/stable/pdf/26391447$$EPDF$$P50$$Gjstor$$H</linktopdf><linktohtml>$$Uhttps://www.jstor.org/stable/26391447$$EHTML$$P50$$Gjstor$$H</linktohtml><link.rule.ids>230,314,776,780,881,27901,27902,58213,58446</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/27856710$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Phan, Jana L.</creatorcontrib><creatorcontrib>Tucker, Matthew R.</creatorcontrib><creatorcontrib>Khor, Shi Fang</creatorcontrib><creatorcontrib>Shirley, Neil</creatorcontrib><creatorcontrib>Lahnstein, Jelle</creatorcontrib><creatorcontrib>Beahan, Cherie</creatorcontrib><creatorcontrib>Bacic, Antony</creatorcontrib><creatorcontrib>Burton, Rachel A.</creatorcontrib><title>Differences in glycosyltransferase family 61 accompany variation in seed coat mucilage composition in Plantago spp</title><title>Journal of experimental botany</title><addtitle>J Exp Bot</addtitle><description>Xylans are the most abundant non-cellulosic polysaccharide found in plant cell walls. A diverse range of xylan structures influence tissue function during growth and development. Despite the abundance of xylans in nature, details of the genes and biochemical pathways controlling their biosynthesis are lacking. In this study we have utilized natural variation within the Plantago genus to examine variation in heteroxylan composition and structure in seed coat mucilage. Compositional assays were combined with analysis of the glycosyltransferase family 61 (GT61) family during seed coat development, with the aim of identifying GT61 sequences participating in xylan backbone substitution. The results reveal natural variation in heteroxylan content and structure, particularly in P. ovata and P. cunninghamii, species which show a similar amount of heteroxylan but different backbone substitution profiles. Analysis of the GT61 family identified specific sequences co-expressed with IRREGULAR XYLEM 10 genes, which encode putative xylan synthases, revealing a close temporal association between xylan synthesis and substitution. Moreover, in P. ovata, several abundant GT61 sequences appear to lack orthologues in P. cunninghamii. Our results indicate that natural variation in Plantago species can be exploited to reveal novel details of seed coat development and polysaccharide biosynthetic pathways.</description><subject>Glycosyltransferases - genetics</subject><subject>Glycosyltransferases - metabolism</subject><subject>Microscopy</subject><subject>Microscopy, Electron, Scanning</subject><subject>Phylogeny</subject><subject>Plant Mucilage - analysis</subject><subject>Plant Mucilage - metabolism</subject><subject>Plantago - enzymology</subject><subject>Plantago - genetics</subject><subject>Plantago - metabolism</subject><subject>Plantago - physiology</subject><subject>Polymerase Chain Reaction</subject><subject>RESEARCH PAPER</subject><subject>Seeds - chemistry</subject><subject>Seeds - enzymology</subject><subject>Seeds - growth &amp; development</subject><subject>Seeds - physiology</subject><issn>0022-0957</issn><issn>1460-2431</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2016</creationdate><recordtype>article</recordtype><recordid>eNpVkc1v1DAQxS0Eokvhwh3kI0JKO_5MfEGqylelSnCAszU76yxeJXGws4X8981q20JPc3i_eTNPj7HXAs4EOHW--7s-D_mPlvoJWwltoZJaiadsBSBlBc7UJ-xFKTsAMGDMc3Yi68bYWsCK5Y-xbUMOA4XC48C33UypzN2UcSiLgCXwFvvYzdwKjkSpH3GY-Q3miFNMw2GphLDhlHDi_Z5ih9vAD1wq8Z743uEw4TbxMo4v2bMWuxJe3c1T9vPzpx-XX6vrb1-uLi-uK1JWT1XAunW11Q0hbZxYCy0laAjOWAVGt0QkddtYi4qgJjK2RVDKQSM1amfVKftw9B336z5sKAxLqM6POfaYZ58w-sfKEH_5bbrxRjTCNG4xeHdnkNPvfSiT72Oh0C1ZQtoXLxotGpBO6wV9f0Qpp1JyaB_OCPCHkvxSkj-WtMBv_3_sAb1vZQHeHIFdmVL-p1vlhNa1ugXt2pqs</recordid><startdate>20161201</startdate><enddate>20161201</enddate><creator>Phan, Jana L.</creator><creator>Tucker, Matthew R.</creator><creator>Khor, Shi Fang</creator><creator>Shirley, Neil</creator><creator>Lahnstein, Jelle</creator><creator>Beahan, Cherie</creator><creator>Bacic, Antony</creator><creator>Burton, Rachel A.</creator><general>Oxford University Press</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20161201</creationdate><title>Differences in glycosyltransferase family 61 accompany variation in seed coat mucilage composition in Plantago spp</title><author>Phan, Jana L. ; Tucker, Matthew R. ; Khor, Shi Fang ; Shirley, Neil ; Lahnstein, Jelle ; Beahan, Cherie ; Bacic, Antony ; Burton, Rachel A.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c364t-ea7f97648cacd91b1422040e9563054fccc24f866a3c07cc56fa03390824a4963</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2016</creationdate><topic>Glycosyltransferases - genetics</topic><topic>Glycosyltransferases - metabolism</topic><topic>Microscopy</topic><topic>Microscopy, Electron, Scanning</topic><topic>Phylogeny</topic><topic>Plant Mucilage - analysis</topic><topic>Plant Mucilage - metabolism</topic><topic>Plantago - enzymology</topic><topic>Plantago - genetics</topic><topic>Plantago - metabolism</topic><topic>Plantago - physiology</topic><topic>Polymerase Chain Reaction</topic><topic>RESEARCH PAPER</topic><topic>Seeds - chemistry</topic><topic>Seeds - enzymology</topic><topic>Seeds - growth &amp; development</topic><topic>Seeds - physiology</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Phan, Jana L.</creatorcontrib><creatorcontrib>Tucker, Matthew R.</creatorcontrib><creatorcontrib>Khor, Shi Fang</creatorcontrib><creatorcontrib>Shirley, Neil</creatorcontrib><creatorcontrib>Lahnstein, Jelle</creatorcontrib><creatorcontrib>Beahan, Cherie</creatorcontrib><creatorcontrib>Bacic, Antony</creatorcontrib><creatorcontrib>Burton, Rachel A.</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Journal of experimental botany</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Phan, Jana L.</au><au>Tucker, Matthew R.</au><au>Khor, Shi Fang</au><au>Shirley, Neil</au><au>Lahnstein, Jelle</au><au>Beahan, Cherie</au><au>Bacic, Antony</au><au>Burton, Rachel A.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Differences in glycosyltransferase family 61 accompany variation in seed coat mucilage composition in Plantago spp</atitle><jtitle>Journal of experimental botany</jtitle><addtitle>J Exp Bot</addtitle><date>2016-12-01</date><risdate>2016</risdate><volume>67</volume><issue>22</issue><spage>6481</spage><epage>6495</epage><pages>6481-6495</pages><issn>0022-0957</issn><eissn>1460-2431</eissn><abstract>Xylans are the most abundant non-cellulosic polysaccharide found in plant cell walls. A diverse range of xylan structures influence tissue function during growth and development. Despite the abundance of xylans in nature, details of the genes and biochemical pathways controlling their biosynthesis are lacking. In this study we have utilized natural variation within the Plantago genus to examine variation in heteroxylan composition and structure in seed coat mucilage. Compositional assays were combined with analysis of the glycosyltransferase family 61 (GT61) family during seed coat development, with the aim of identifying GT61 sequences participating in xylan backbone substitution. The results reveal natural variation in heteroxylan content and structure, particularly in P. ovata and P. cunninghamii, species which show a similar amount of heteroxylan but different backbone substitution profiles. Analysis of the GT61 family identified specific sequences co-expressed with IRREGULAR XYLEM 10 genes, which encode putative xylan synthases, revealing a close temporal association between xylan synthesis and substitution. Moreover, in P. ovata, several abundant GT61 sequences appear to lack orthologues in P. cunninghamii. Our results indicate that natural variation in Plantago species can be exploited to reveal novel details of seed coat development and polysaccharide biosynthetic pathways.</abstract><cop>England</cop><pub>Oxford University Press</pub><pmid>27856710</pmid><doi>10.1093/jxb/erw424</doi><tpages>15</tpages><oa>free_for_read</oa></addata></record>
fulltext fulltext
identifier ISSN: 0022-0957
ispartof Journal of experimental botany, 2016-12, Vol.67 (22), p.6481-6495
issn 0022-0957
1460-2431
language eng
recordid cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_5181589
source JSTOR Archival Journals and Primary Sources Collection; Oxford Journals Online
subjects Glycosyltransferases - genetics
Glycosyltransferases - metabolism
Microscopy
Microscopy, Electron, Scanning
Phylogeny
Plant Mucilage - analysis
Plant Mucilage - metabolism
Plantago - enzymology
Plantago - genetics
Plantago - metabolism
Plantago - physiology
Polymerase Chain Reaction
RESEARCH PAPER
Seeds - chemistry
Seeds - enzymology
Seeds - growth & development
Seeds - physiology
title Differences in glycosyltransferase family 61 accompany variation in seed coat mucilage composition in Plantago spp
url http://sfxeu10.hosted.exlibrisgroup.com/loughborough?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-02-06T19%3A54%3A05IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-jstor_pubme&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Differences%20in%20glycosyltransferase%20family%2061%20accompany%20variation%20in%20seed%20coat%20mucilage%20composition%20in%20Plantago%20spp&rft.jtitle=Journal%20of%20experimental%20botany&rft.au=Phan,%20Jana%20L.&rft.date=2016-12-01&rft.volume=67&rft.issue=22&rft.spage=6481&rft.epage=6495&rft.pages=6481-6495&rft.issn=0022-0957&rft.eissn=1460-2431&rft_id=info:doi/10.1093/jxb/erw424&rft_dat=%3Cjstor_pubme%3E26391447%3C/jstor_pubme%3E%3Cgrp_id%3Ecdi_FETCH-LOGICAL-c364t-ea7f97648cacd91b1422040e9563054fccc24f866a3c07cc56fa03390824a4963%3C/grp_id%3E%3Coa%3E%3C/oa%3E%3Curl%3E%3C/url%3E&rft_id=info:oai/&rft_pqid=1841802944&rft_id=info:pmid/27856710&rft_jstor_id=26391447&rfr_iscdi=true