Single Nucleotide Polymorphisms of the ERAP1 Gene and Risk of NSCLC: A Comparison of Genetically Distant Populations, Chinese and Caucasian

• Published in: Archivum Immunologiae et Therapiae Experimentalis 2016-12, Vol.64 (Suppl 1), p.117-122
• Main Authors: Yao, Yufeng, Wiśniewski, Andrzej, Ma, Qiangli, Kowal, Aneta, Porębska, Irena, Pawełczyk, Konrad, Yu, Jiankun, Dubis, Joanna, Żuk, Natalia, Li, Yingfu, Shi, Li, Kuśnierczyk, Piotr
• Format: Article
• Language: English
• Subjects: Adult; Aged; Aminopeptidases - genetics; Asian Continental Ancestry Group; Biomedical and Life Sciences; Biomedicine; Carcinoma, Non-Small-Cell Lung - genetics; Carcinoma, Non-Small-Cell Lung - metabolism; China; European Continental Ancestry Group; Female; Gene Expression Regulation, Neoplastic; Genetic Predisposition to Disease; Genotype; Haplotypes; HLA Antigens - metabolism; Humans; Immunology; Lung Neoplasms - genetics; Lung Neoplasms - metabolism; Male; Middle Aged; Minor Histocompatibility Antigens - genetics; Original; Original Article; Pharmacology/Toxicology; Poland; Polymorphism, Single Nucleotide; Risk
• ISSN: 0004-069X; 1661-4917
• DOI: 10.1007/s00005-016-0436-4

An effective cytotoxic immune response to neoplastic cells requires efficient presentation of antigenic peptides to T lymphocytes by HLA class I (HLA-I) molecules. The HLA-I-bound peptide repertoire depends on antigen-processing machinery molecules. Aminopeptidase residing in endoplasmic reticulum 1 (ERAP1) trims peptides to the optimal length for HLA-I binding. Single nucleotide polymorphisms (SNPs) in the ERAP1 gene result in changes in aminopeptidase activity and specificity. This may affect susceptibility to cancer. However, non-small cell lung carcinoma (NSCLC) has not been studied in this respect. We compared genotype and haplotype frequencies of four coding, nonsynonymous ERAP1 SNPs, rs26653G > C, rs26618T > C, rs30187C > T, and rs27044C > G, in NSCLC occurring in two genetically distant populations, Chinese and Poles. We found associations of all four SNPs with NSCLC in Chinese but not in Poles. The differences in ERAP1 -NSCLC associations might be explained by highly significant differences in SNP genotype frequencies between Chinese and Poles (except for rs26618). In accordance with this, the most frequent ERAP1 haplotypes were distributed differently in cases versus controls in Chinese, but not in Poles. Our findings add to the differences between Orientals and Caucasians in genetics of disease susceptibility.