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New Thermophilic and Thermostable Esterase with Sequence Similarity to the Hormone-Sensitive Lipase Family, Cloned from a Metagenomic Library
A gene coding for a thermostable esterase was isolated by functional screening of Escherichia coli cells that had been transformed with fosmid environmental DNA libraries constructed with metagenomes from thermal environmental samples. The gene conferring esterase activity on E. coli grown on tribut...
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Published in: | Applied and Environmental Microbiology 2005-02, Vol.71 (2), p.817-825 |
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description | A gene coding for a thermostable esterase was isolated by functional screening of Escherichia coli cells that had been transformed with fosmid environmental DNA libraries constructed with metagenomes from thermal environmental samples. The gene conferring esterase activity on E. coli grown on tributyrin agar was composed of 936 bp, corresponding to 311 amino acid residues with a molecular mass of 34 kDa. The enzyme showed significant amino acid similarity (64%) to the enzyme from a hyperthermophilic archaeon, Pyrobaculum calidifontis. An amino acid sequence comparison with other esterases and lipases revealed that the enzyme should be classified as a new member of the hormone-sensitive lipase family. The recombinant esterase that was overexpressed and purified from E. coli was active above 30°C up to 95°C and had a high thermal stability. It displayed a high degree of activity in a pH range of 5.5 to 7.5, with an optimal pH of approximately 6.0. The best substrate for the enzyme among the p-nitrophenyl esters (C₄ to C₁₆) examined was p-nitrophenyl caproate (C₆), and no lipolytic activity was observed with esters containing an acyl chain length of longer than 10 carbon atoms, indicating that the enzyme is an esterase and not a lipase. |
doi_str_mv | 10.1128/AEM.71.2.817-825.2005 |
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The gene conferring esterase activity on E. coli grown on tributyrin agar was composed of 936 bp, corresponding to 311 amino acid residues with a molecular mass of 34 kDa. The enzyme showed significant amino acid similarity (64%) to the enzyme from a hyperthermophilic archaeon, Pyrobaculum calidifontis. An amino acid sequence comparison with other esterases and lipases revealed that the enzyme should be classified as a new member of the hormone-sensitive lipase family. The recombinant esterase that was overexpressed and purified from E. coli was active above 30°C up to 95°C and had a high thermal stability. It displayed a high degree of activity in a pH range of 5.5 to 7.5, with an optimal pH of approximately 6.0. The best substrate for the enzyme among the p-nitrophenyl esters (C₄ to C₁₆) examined was p-nitrophenyl caproate (C₆), and no lipolytic activity was observed with esters containing an acyl chain length of longer than 10 carbon atoms, indicating that the enzyme is an esterase and not a lipase.</description><identifier>ISSN: 0099-2240</identifier><identifier>EISSN: 1098-5336</identifier><identifier>DOI: 10.1128/AEM.71.2.817-825.2005</identifier><identifier>PMID: 15691936</identifier><identifier>CODEN: AEMIDF</identifier><language>eng</language><publisher>Washington, DC: American Society for Microbiology</publisher><subject>Amino Acid Sequence ; Amino acids ; Biological and medical sciences ; Biology of microorganisms of confirmed or potential industrial interest ; Biotechnology ; Cloning, Molecular ; Enzyme Stability ; Enzymes ; Enzymology and Protein Engineering ; Escherichia coli - enzymology ; Escherichia coli - genetics ; Esterases - chemistry ; Esterases - genetics ; Esterases - metabolism ; Fundamental and applied biological sciences. Psychology ; Genomic Library ; Hormones ; Hot Temperature ; Hydrogen-Ion Concentration ; Microbiology ; Miscellaneous ; Mission oriented research ; Molecular Sequence Data ; Pyrobaculum - enzymology ; Pyrobaculum - genetics ; Recombinant Proteins - chemistry ; Recombinant Proteins - genetics ; Recombinant Proteins - metabolism ; Sequence Analysis, DNA ; Substrate Specificity</subject><ispartof>Applied and Environmental Microbiology, 2005-02, Vol.71 (2), p.817-825</ispartof><rights>2006 INIST-CNRS</rights><rights>Copyright American Society for Microbiology Feb 2005</rights><rights>Copyright © 2005, American Society for Microbiology 2005</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c551t-ba2e4f8ce20ec4fc3649927d88507acd7a4bdd54e3f6c8acc60fa19e5924c3ed3</citedby><cites>FETCH-LOGICAL-c551t-ba2e4f8ce20ec4fc3649927d88507acd7a4bdd54e3f6c8acc60fa19e5924c3ed3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC546692/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC546692/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,723,776,780,881,3174,3175,27903,27904,53769,53771</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=17037537$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/15691936$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Rhee, Jin-Kyu</creatorcontrib><creatorcontrib>Ahn, Dae-Gyun</creatorcontrib><creatorcontrib>Kim, Yeon-Gu</creatorcontrib><creatorcontrib>Oh, Jong-Won</creatorcontrib><title>New Thermophilic and Thermostable Esterase with Sequence Similarity to the Hormone-Sensitive Lipase Family, Cloned from a Metagenomic Library</title><title>Applied and Environmental Microbiology</title><addtitle>Appl Environ Microbiol</addtitle><description>A gene coding for a thermostable esterase was isolated by functional screening of Escherichia coli cells that had been transformed with fosmid environmental DNA libraries constructed with metagenomes from thermal environmental samples. The gene conferring esterase activity on E. coli grown on tributyrin agar was composed of 936 bp, corresponding to 311 amino acid residues with a molecular mass of 34 kDa. The enzyme showed significant amino acid similarity (64%) to the enzyme from a hyperthermophilic archaeon, Pyrobaculum calidifontis. An amino acid sequence comparison with other esterases and lipases revealed that the enzyme should be classified as a new member of the hormone-sensitive lipase family. The recombinant esterase that was overexpressed and purified from E. coli was active above 30°C up to 95°C and had a high thermal stability. It displayed a high degree of activity in a pH range of 5.5 to 7.5, with an optimal pH of approximately 6.0. The best substrate for the enzyme among the p-nitrophenyl esters (C₄ to C₁₆) examined was p-nitrophenyl caproate (C₆), and no lipolytic activity was observed with esters containing an acyl chain length of longer than 10 carbon atoms, indicating that the enzyme is an esterase and not a lipase.</description><subject>Amino Acid Sequence</subject><subject>Amino acids</subject><subject>Biological and medical sciences</subject><subject>Biology of microorganisms of confirmed or potential industrial interest</subject><subject>Biotechnology</subject><subject>Cloning, Molecular</subject><subject>Enzyme Stability</subject><subject>Enzymes</subject><subject>Enzymology and Protein Engineering</subject><subject>Escherichia coli - enzymology</subject><subject>Escherichia coli - genetics</subject><subject>Esterases - chemistry</subject><subject>Esterases - genetics</subject><subject>Esterases - metabolism</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Genomic Library</subject><subject>Hormones</subject><subject>Hot Temperature</subject><subject>Hydrogen-Ion Concentration</subject><subject>Microbiology</subject><subject>Miscellaneous</subject><subject>Mission oriented research</subject><subject>Molecular Sequence Data</subject><subject>Pyrobaculum - enzymology</subject><subject>Pyrobaculum - genetics</subject><subject>Recombinant Proteins - chemistry</subject><subject>Recombinant Proteins - genetics</subject><subject>Recombinant Proteins - metabolism</subject><subject>Sequence Analysis, DNA</subject><subject>Substrate Specificity</subject><issn>0099-2240</issn><issn>1098-5336</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2005</creationdate><recordtype>article</recordtype><recordid>eNpdkk1vEzEQhlcIREPhJwAWEj2xwR9r7_rAoYpSipTCIe3Zmnhns65218HeNMqP4D_XUaIWOI3ked758DtZ9p7RKWO8-no5v5mWbMqnFSvzisspp1S-yCaM6iqXQqiX2YRSrXPOC3qWvYnxnlJaUFW9zs6YVJppoSbZn5-4I7ctht5vWtc5S2CoTw9xhFWHZB5HDBCR7NzYkiX-3uJgkSxd7zoIbtyT0ZOxRXLtk2jAfIlDdKN7QLJwm4PwChK6_0JmXUrXpAm-J0BucIQ1Dr5PTRduFSDs32avGugivjvF8-zuan47u84Xv77_mF0ucislG_MVcCyayiKnaIvGClVozcu6qiQtwdYlFKu6lgWKRtkKrFW0AaZRal5YgbU4z74d6262qx5ri8MYoDOb4Po0hfHgzL-ZwbVm7R-MLJTSPOkvTvrg03fE0fQuWuw6GNBvo1FlQaVmIoGf_gPv_TYMaTfDEyG1VkWC5BGywccYsHkahFFzMNsks03JDDfJbJPMNgezk-7D31s8q07uJuDzCYBooWsCDNbFZ66kopSiTBw5cq1btzsX0EDsDWD_1DQhH49IA97AOqQyd0tOmUg3VmlaavEIJVrKmQ</recordid><startdate>20050201</startdate><enddate>20050201</enddate><creator>Rhee, Jin-Kyu</creator><creator>Ahn, Dae-Gyun</creator><creator>Kim, Yeon-Gu</creator><creator>Oh, Jong-Won</creator><general>American Society for Microbiology</general><scope>FBQ</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7QO</scope><scope>7SN</scope><scope>7SS</scope><scope>7ST</scope><scope>7T7</scope><scope>7TM</scope><scope>7U9</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>H94</scope><scope>M7N</scope><scope>P64</scope><scope>RC3</scope><scope>SOI</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20050201</creationdate><title>New Thermophilic and Thermostable Esterase with Sequence Similarity to the Hormone-Sensitive Lipase Family, Cloned from a Metagenomic Library</title><author>Rhee, Jin-Kyu ; Ahn, Dae-Gyun ; Kim, Yeon-Gu ; Oh, Jong-Won</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c551t-ba2e4f8ce20ec4fc3649927d88507acd7a4bdd54e3f6c8acc60fa19e5924c3ed3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2005</creationdate><topic>Amino Acid Sequence</topic><topic>Amino acids</topic><topic>Biological and medical sciences</topic><topic>Biology of microorganisms of confirmed or potential industrial interest</topic><topic>Biotechnology</topic><topic>Cloning, Molecular</topic><topic>Enzyme Stability</topic><topic>Enzymes</topic><topic>Enzymology and Protein Engineering</topic><topic>Escherichia coli - enzymology</topic><topic>Escherichia coli - genetics</topic><topic>Esterases - chemistry</topic><topic>Esterases - genetics</topic><topic>Esterases - metabolism</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Genomic Library</topic><topic>Hormones</topic><topic>Hot Temperature</topic><topic>Hydrogen-Ion Concentration</topic><topic>Microbiology</topic><topic>Miscellaneous</topic><topic>Mission oriented research</topic><topic>Molecular Sequence Data</topic><topic>Pyrobaculum - enzymology</topic><topic>Pyrobaculum - genetics</topic><topic>Recombinant Proteins - chemistry</topic><topic>Recombinant Proteins - genetics</topic><topic>Recombinant Proteins - metabolism</topic><topic>Sequence Analysis, DNA</topic><topic>Substrate Specificity</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Rhee, Jin-Kyu</creatorcontrib><creatorcontrib>Ahn, Dae-Gyun</creatorcontrib><creatorcontrib>Kim, Yeon-Gu</creatorcontrib><creatorcontrib>Oh, Jong-Won</creatorcontrib><collection>AGRIS</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Biotechnology Research Abstracts</collection><collection>Ecology Abstracts</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Environment Abstracts</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Nucleic Acids Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>Environment Abstracts</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Applied and Environmental Microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Rhee, Jin-Kyu</au><au>Ahn, Dae-Gyun</au><au>Kim, Yeon-Gu</au><au>Oh, Jong-Won</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>New Thermophilic and Thermostable Esterase with Sequence Similarity to the Hormone-Sensitive Lipase Family, Cloned from a Metagenomic Library</atitle><jtitle>Applied and Environmental Microbiology</jtitle><addtitle>Appl Environ Microbiol</addtitle><date>2005-02-01</date><risdate>2005</risdate><volume>71</volume><issue>2</issue><spage>817</spage><epage>825</epage><pages>817-825</pages><issn>0099-2240</issn><eissn>1098-5336</eissn><coden>AEMIDF</coden><abstract>A gene coding for a thermostable esterase was isolated by functional screening of Escherichia coli cells that had been transformed with fosmid environmental DNA libraries constructed with metagenomes from thermal environmental samples. The gene conferring esterase activity on E. coli grown on tributyrin agar was composed of 936 bp, corresponding to 311 amino acid residues with a molecular mass of 34 kDa. The enzyme showed significant amino acid similarity (64%) to the enzyme from a hyperthermophilic archaeon, Pyrobaculum calidifontis. An amino acid sequence comparison with other esterases and lipases revealed that the enzyme should be classified as a new member of the hormone-sensitive lipase family. The recombinant esterase that was overexpressed and purified from E. coli was active above 30°C up to 95°C and had a high thermal stability. It displayed a high degree of activity in a pH range of 5.5 to 7.5, with an optimal pH of approximately 6.0. The best substrate for the enzyme among the p-nitrophenyl esters (C₄ to C₁₆) examined was p-nitrophenyl caproate (C₆), and no lipolytic activity was observed with esters containing an acyl chain length of longer than 10 carbon atoms, indicating that the enzyme is an esterase and not a lipase.</abstract><cop>Washington, DC</cop><pub>American Society for Microbiology</pub><pmid>15691936</pmid><doi>10.1128/AEM.71.2.817-825.2005</doi><tpages>9</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Amino Acid Sequence Amino acids Biological and medical sciences Biology of microorganisms of confirmed or potential industrial interest Biotechnology Cloning, Molecular Enzyme Stability Enzymes Enzymology and Protein Engineering Escherichia coli - enzymology Escherichia coli - genetics Esterases - chemistry Esterases - genetics Esterases - metabolism Fundamental and applied biological sciences. Psychology Genomic Library Hormones Hot Temperature Hydrogen-Ion Concentration Microbiology Miscellaneous Mission oriented research Molecular Sequence Data Pyrobaculum - enzymology Pyrobaculum - genetics Recombinant Proteins - chemistry Recombinant Proteins - genetics Recombinant Proteins - metabolism Sequence Analysis, DNA Substrate Specificity |
title | New Thermophilic and Thermostable Esterase with Sequence Similarity to the Hormone-Sensitive Lipase Family, Cloned from a Metagenomic Library |
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