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Genomic evidence of hybridization between two independent invasions of European green crab (Carcinus maenas) in the Northwest Atlantic
Invasive species have been associated with significant negative impacts in their introduced range often outcompeting native species, yet the long-term evolutionary dynamics of biological invasions are not well understood. Hybridization, either among waves of invasion or between native and introduced...
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Published in: | Heredity 2017-09, Vol.119 (3), p.154-165 |
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creator | Jeffery, N W DiBacco, C Wringe, B F Stanley, R R E Hamilton, L C Ravindran, P N Bradbury, I R |
description | Invasive species have been associated with significant negative impacts in their introduced range often outcompeting native species, yet the long-term evolutionary dynamics of biological invasions are not well understood. Hybridization, either among waves of invasion or between native and introduced populations, could alter the ecological and evolutionary impacts of invasions yet has rarely been studied in marine invasive species. The European green crab (Carcinus maenas) invaded eastern North America twice from northern and southern locations in its native range. Here we examine the frequency of hybridization among these two distinct invasions at locations from New Jersey, USA to Newfoundland, Canada using restriction-site-associated DNA sequencing (RAD-seq), microsatellite loci and cytochrome c oxidase subunit I mitochondrial DNA (mtDNA) sequences. We used Bayesian clustering and hybrid assignment analyses to investigate hybridization between the northern and southern populations. Of the samples analyzed, six locations contained at least one hybrid individual, while two locations were characterized by extensive hybridization, with 95% of individuals collected from Placentia Bay, Newfoundland being hybrids (mostly F
) and 90% of individuals from Kejimkujik, Nova Scotia being classified as hybrids, mostly backcrosses to the northern ecotype. The presence of both F
hybrids and backcrossed individuals suggests that these hybrids are viable and introgression is occurring between invasions. Our results provide insight into the demographic and evolutionary consequences of hybridization between independent invasions, and will inform the management of green crabs in eastern North America. |
doi_str_mv | 10.1038/hdy.2017.22 |
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hybrids and backcrossed individuals suggests that these hybrids are viable and introgression is occurring between invasions. Our results provide insight into the demographic and evolutionary consequences of hybridization between independent invasions, and will inform the management of green crabs in eastern North America.</description><identifier>ISSN: 0018-067X</identifier><identifier>EISSN: 1365-2540</identifier><identifier>DOI: 10.1038/hdy.2017.22</identifier><identifier>PMID: 28422135</identifier><language>eng</language><publisher>England: Springer Nature B.V</publisher><subject>Animals ; Bayes Theorem ; Bayesian analysis ; Biological evolution ; Brachyura - genetics ; Clustering ; Crabs ; Crustaceans ; Cytochrome-c oxidase ; Demographics ; Deoxyribonucleic acid ; DNA ; DNA sequencing ; DNA, Mitochondrial - genetics ; Ecological monitoring ; Evolution ; Genetic Markers ; Genetics, Population ; Hybridization ; Hybridization, Genetic ; Hybrids ; Indigenous species ; Introduced Species ; Invasions ; Invasive species ; Microsatellite Repeats ; Mitochondrial DNA ; New Jersey ; Newfoundland and Labrador ; Nonnative species ; Nucleotide sequence ; Original ; Oxidase ; Polymorphism, Single Nucleotide ; Populations ; Sequence Analysis, DNA ; Shellfish</subject><ispartof>Heredity, 2017-09, Vol.119 (3), p.154-165</ispartof><rights>Copyright Nature Publishing Group Sep 2017</rights><rights>Copyright © 2017 Macmillan Publishers Limited, part of Springer Nature. 2017 Macmillan Publishers Limited, part of Springer Nature.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c475t-89645df8e5c28c2124d65633e0b288aeadef28946b02dc4ba1ea3667687b68023</citedby><cites>FETCH-LOGICAL-c475t-89645df8e5c28c2124d65633e0b288aeadef28946b02dc4ba1ea3667687b68023</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC5555096/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC5555096/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,727,780,784,885,27924,27925,53791,53793</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/28422135$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Jeffery, N W</creatorcontrib><creatorcontrib>DiBacco, C</creatorcontrib><creatorcontrib>Wringe, B F</creatorcontrib><creatorcontrib>Stanley, R R E</creatorcontrib><creatorcontrib>Hamilton, L C</creatorcontrib><creatorcontrib>Ravindran, P N</creatorcontrib><creatorcontrib>Bradbury, I R</creatorcontrib><title>Genomic evidence of hybridization between two independent invasions of European green crab (Carcinus maenas) in the Northwest Atlantic</title><title>Heredity</title><addtitle>Heredity (Edinb)</addtitle><description>Invasive species have been associated with significant negative impacts in their introduced range often outcompeting native species, yet the long-term evolutionary dynamics of biological invasions are not well understood. Hybridization, either among waves of invasion or between native and introduced populations, could alter the ecological and evolutionary impacts of invasions yet has rarely been studied in marine invasive species. The European green crab (Carcinus maenas) invaded eastern North America twice from northern and southern locations in its native range. Here we examine the frequency of hybridization among these two distinct invasions at locations from New Jersey, USA to Newfoundland, Canada using restriction-site-associated DNA sequencing (RAD-seq), microsatellite loci and cytochrome c oxidase subunit I mitochondrial DNA (mtDNA) sequences. We used Bayesian clustering and hybrid assignment analyses to investigate hybridization between the northern and southern populations. Of the samples analyzed, six locations contained at least one hybrid individual, while two locations were characterized by extensive hybridization, with 95% of individuals collected from Placentia Bay, Newfoundland being hybrids (mostly F
) and 90% of individuals from Kejimkujik, Nova Scotia being classified as hybrids, mostly backcrosses to the northern ecotype. The presence of both F
hybrids and backcrossed individuals suggests that these hybrids are viable and introgression is occurring between invasions. Our results provide insight into the demographic and evolutionary consequences of hybridization between independent invasions, and will inform the management of green crabs in eastern North America.</description><subject>Animals</subject><subject>Bayes Theorem</subject><subject>Bayesian analysis</subject><subject>Biological evolution</subject><subject>Brachyura - genetics</subject><subject>Clustering</subject><subject>Crabs</subject><subject>Crustaceans</subject><subject>Cytochrome-c oxidase</subject><subject>Demographics</subject><subject>Deoxyribonucleic acid</subject><subject>DNA</subject><subject>DNA sequencing</subject><subject>DNA, Mitochondrial - genetics</subject><subject>Ecological monitoring</subject><subject>Evolution</subject><subject>Genetic Markers</subject><subject>Genetics, Population</subject><subject>Hybridization</subject><subject>Hybridization, Genetic</subject><subject>Hybrids</subject><subject>Indigenous species</subject><subject>Introduced Species</subject><subject>Invasions</subject><subject>Invasive species</subject><subject>Microsatellite Repeats</subject><subject>Mitochondrial DNA</subject><subject>New Jersey</subject><subject>Newfoundland and Labrador</subject><subject>Nonnative species</subject><subject>Nucleotide sequence</subject><subject>Original</subject><subject>Oxidase</subject><subject>Polymorphism, Single Nucleotide</subject><subject>Populations</subject><subject>Sequence Analysis, DNA</subject><subject>Shellfish</subject><issn>0018-067X</issn><issn>1365-2540</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2017</creationdate><recordtype>article</recordtype><recordid>eNpdkU9rFDEYxoModq2evEvAS6XMmj8zmcxFKEtbhaIXBW8hk7zTSdlJ1iSzy_oB_NxmaC1qDkkgv_fJ8_Ag9JqSNSVcvh_tcc0IbdeMPUErykVTsaYmT9GKECorItrvJ-hFSneEEN6y7jk6YbJmjPJmhX5dgw-TMxj2zoI3gMOAx2MfnXU_dXbB4x7yAcDjfAjYeQs7KJvP5b7XqQBpGbmcY9iB9vg2LqyJusdnGx2N83PCkwav07sygvMI-HOIeTxAyvgib7XPzrxEzwa9TfDq4TxF364uv24-Vjdfrj9tLm4qU7dNrmQn6sYOEhrDpGGU1VY0gnMgPZNSg7YwMNnVoifMmrrXFDQXohWy7YUkjJ-iD_e6u7mfwJqSI-qt2kU36XhUQTv174t3o7oNe9WURTpRBM4eBGL4MZcIanLJwLbEgDAnRaXsyncNpQV9-x96F-boSzxFO9bSlvG6LdT5PWViSCnC8GiGErX0q0q_aulXscX_m7_9P7J_CuW_AVFLo28</recordid><startdate>20170901</startdate><enddate>20170901</enddate><creator>Jeffery, N W</creator><creator>DiBacco, C</creator><creator>Wringe, B F</creator><creator>Stanley, R R E</creator><creator>Hamilton, L C</creator><creator>Ravindran, P N</creator><creator>Bradbury, I R</creator><general>Springer Nature B.V</general><general>Nature Publishing Group</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QL</scope><scope>7SN</scope><scope>7SS</scope><scope>7T7</scope><scope>7TK</scope><scope>7U9</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>88I</scope><scope>8AO</scope><scope>8C1</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>8G5</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>GUQSH</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M2O</scope><scope>M2P</scope><scope>M7N</scope><scope>M7P</scope><scope>MBDVC</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>Q9U</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20170901</creationdate><title>Genomic evidence of hybridization between two independent invasions of European green crab (Carcinus maenas) in the Northwest Atlantic</title><author>Jeffery, N W ; DiBacco, C ; Wringe, B F ; Stanley, R R E ; Hamilton, L C ; Ravindran, P N ; Bradbury, I R</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c475t-89645df8e5c28c2124d65633e0b288aeadef28946b02dc4ba1ea3667687b68023</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2017</creationdate><topic>Animals</topic><topic>Bayes Theorem</topic><topic>Bayesian analysis</topic><topic>Biological evolution</topic><topic>Brachyura - 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Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Heredity</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Jeffery, N W</au><au>DiBacco, C</au><au>Wringe, B F</au><au>Stanley, R R E</au><au>Hamilton, L C</au><au>Ravindran, P N</au><au>Bradbury, I R</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Genomic evidence of hybridization between two independent invasions of European green crab (Carcinus maenas) in the Northwest Atlantic</atitle><jtitle>Heredity</jtitle><addtitle>Heredity (Edinb)</addtitle><date>2017-09-01</date><risdate>2017</risdate><volume>119</volume><issue>3</issue><spage>154</spage><epage>165</epage><pages>154-165</pages><issn>0018-067X</issn><eissn>1365-2540</eissn><abstract>Invasive species have been associated with significant negative impacts in their introduced range often outcompeting native species, yet the long-term evolutionary dynamics of biological invasions are not well understood. Hybridization, either among waves of invasion or between native and introduced populations, could alter the ecological and evolutionary impacts of invasions yet has rarely been studied in marine invasive species. The European green crab (Carcinus maenas) invaded eastern North America twice from northern and southern locations in its native range. Here we examine the frequency of hybridization among these two distinct invasions at locations from New Jersey, USA to Newfoundland, Canada using restriction-site-associated DNA sequencing (RAD-seq), microsatellite loci and cytochrome c oxidase subunit I mitochondrial DNA (mtDNA) sequences. We used Bayesian clustering and hybrid assignment analyses to investigate hybridization between the northern and southern populations. Of the samples analyzed, six locations contained at least one hybrid individual, while two locations were characterized by extensive hybridization, with 95% of individuals collected from Placentia Bay, Newfoundland being hybrids (mostly F
) and 90% of individuals from Kejimkujik, Nova Scotia being classified as hybrids, mostly backcrosses to the northern ecotype. The presence of both F
hybrids and backcrossed individuals suggests that these hybrids are viable and introgression is occurring between invasions. Our results provide insight into the demographic and evolutionary consequences of hybridization between independent invasions, and will inform the management of green crabs in eastern North America.</abstract><cop>England</cop><pub>Springer Nature B.V</pub><pmid>28422135</pmid><doi>10.1038/hdy.2017.22</doi><tpages>12</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Animals Bayes Theorem Bayesian analysis Biological evolution Brachyura - genetics Clustering Crabs Crustaceans Cytochrome-c oxidase Demographics Deoxyribonucleic acid DNA DNA sequencing DNA, Mitochondrial - genetics Ecological monitoring Evolution Genetic Markers Genetics, Population Hybridization Hybridization, Genetic Hybrids Indigenous species Introduced Species Invasions Invasive species Microsatellite Repeats Mitochondrial DNA New Jersey Newfoundland and Labrador Nonnative species Nucleotide sequence Original Oxidase Polymorphism, Single Nucleotide Populations Sequence Analysis, DNA Shellfish |
title | Genomic evidence of hybridization between two independent invasions of European green crab (Carcinus maenas) in the Northwest Atlantic |
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