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Connecting virulence pathways to cell-cycle progression in the fungal pathogen Cryptococcus neoformans
Proliferation and host evasion are critical processes to understand at a basic biological level for improving infectious disease treatment options. The human fungal pathogen Cryptococcus neoformans causes fungal meningitis in immunocompromised individuals by proliferating in cerebrospinal fluid. Cur...
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Published in: | Current genetics 2017-10, Vol.63 (5), p.803-811 |
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description | Proliferation and host evasion are critical processes to understand at a basic biological level for improving infectious disease treatment options. The human fungal pathogen
Cryptococcus neoformans
causes fungal meningitis in immunocompromised individuals by proliferating in cerebrospinal fluid. Current antifungal drugs target “virulence factors” for disease, such as components of the cell wall and polysaccharide capsule in
C. neoformans
. However, mechanistic links between virulence pathways and the cell cycle are not as well studied. Recently, cell-cycle synchronized
C. neoformans
cells were profiled over time to identify gene expression dynamics (Kelliher et al., PLoS Genet 12(12):e1006453,
2016
). Almost 20% of all genes in the
C. neoformans
genome were periodically activated during the cell cycle in rich media, including 40 genes that have previously been implicated in virulence pathways. Here, we review important findings about cell-cycle-regulated genes in
C. neoformans
and provide two examples of virulence pathways—chitin synthesis and G-protein coupled receptor signaling—with their putative connections to cell division. We propose that a “comparative functional genomics” approach, leveraging gene expression timing during the cell cycle, orthology to genes in other fungal species, and previous experimental findings, can lead to mechanistic hypotheses connecting the cell cycle to fungal virulence. |
doi_str_mv | 10.1007/s00294-017-0688-5 |
format | article |
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Cryptococcus neoformans
causes fungal meningitis in immunocompromised individuals by proliferating in cerebrospinal fluid. Current antifungal drugs target “virulence factors” for disease, such as components of the cell wall and polysaccharide capsule in
C. neoformans
. However, mechanistic links between virulence pathways and the cell cycle are not as well studied. Recently, cell-cycle synchronized
C. neoformans
cells were profiled over time to identify gene expression dynamics (Kelliher et al., PLoS Genet 12(12):e1006453,
2016
). Almost 20% of all genes in the
C. neoformans
genome were periodically activated during the cell cycle in rich media, including 40 genes that have previously been implicated in virulence pathways. Here, we review important findings about cell-cycle-regulated genes in
C. neoformans
and provide two examples of virulence pathways—chitin synthesis and G-protein coupled receptor signaling—with their putative connections to cell division. We propose that a “comparative functional genomics” approach, leveraging gene expression timing during the cell cycle, orthology to genes in other fungal species, and previous experimental findings, can lead to mechanistic hypotheses connecting the cell cycle to fungal virulence.</description><identifier>ISSN: 0172-8083</identifier><identifier>EISSN: 1432-0983</identifier><identifier>DOI: 10.1007/s00294-017-0688-5</identifier><identifier>PMID: 28265742</identifier><language>eng</language><publisher>Berlin/Heidelberg: Springer Berlin Heidelberg</publisher><subject>Biochemistry ; Biomedical and Life Sciences ; Cell Biology ; Cell Cycle ; Cell division ; Cell walls ; Cerebrospinal fluid ; Chitin ; Chitin - biosynthesis ; Cryptococcosis - microbiology ; Cryptococcus neoformans - physiology ; Fungal infections ; Fungi ; Fungicides ; G protein-coupled receptors ; Gene expression ; Gene Expression Regulation, Fungal ; Gene Regulatory Networks ; Genes ; Genomics ; Infectious diseases ; Life Sciences ; Medical treatment ; Meningitis ; Microbial Genetics and Genomics ; Microbiology ; Orthology ; Pathogens ; Plant Sciences ; Protein Binding ; Protein biosynthesis ; Protein Subunits - genetics ; Protein Subunits - metabolism ; Proteomics ; Receptors, G-Protein-Coupled - chemistry ; Receptors, G-Protein-Coupled - metabolism ; Review ; Signal Transduction ; Virulence ; Virulence - genetics ; Virulence factors ; Virulence Factors - genetics</subject><ispartof>Current genetics, 2017-10, Vol.63 (5), p.803-811</ispartof><rights>The Author(s) 2017</rights><rights>Current Genetics is a copyright of Springer, 2017.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c536t-537e4e38efe36edf2abd28175074d2890655fb8ba8b9709971eef5026e9243763</citedby><cites>FETCH-LOGICAL-c536t-537e4e38efe36edf2abd28175074d2890655fb8ba8b9709971eef5026e9243763</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>230,314,780,784,885,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/28265742$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Kelliher, Christina M.</creatorcontrib><creatorcontrib>Haase, Steven B.</creatorcontrib><title>Connecting virulence pathways to cell-cycle progression in the fungal pathogen Cryptococcus neoformans</title><title>Current genetics</title><addtitle>Curr Genet</addtitle><addtitle>Curr Genet</addtitle><description>Proliferation and host evasion are critical processes to understand at a basic biological level for improving infectious disease treatment options. The human fungal pathogen
Cryptococcus neoformans
causes fungal meningitis in immunocompromised individuals by proliferating in cerebrospinal fluid. Current antifungal drugs target “virulence factors” for disease, such as components of the cell wall and polysaccharide capsule in
C. neoformans
. However, mechanistic links between virulence pathways and the cell cycle are not as well studied. Recently, cell-cycle synchronized
C. neoformans
cells were profiled over time to identify gene expression dynamics (Kelliher et al., PLoS Genet 12(12):e1006453,
2016
). Almost 20% of all genes in the
C. neoformans
genome were periodically activated during the cell cycle in rich media, including 40 genes that have previously been implicated in virulence pathways. Here, we review important findings about cell-cycle-regulated genes in
C. neoformans
and provide two examples of virulence pathways—chitin synthesis and G-protein coupled receptor signaling—with their putative connections to cell division. We propose that a “comparative functional genomics” approach, leveraging gene expression timing during the cell cycle, orthology to genes in other fungal species, and previous experimental findings, can lead to mechanistic hypotheses connecting the cell cycle to fungal virulence.</description><subject>Biochemistry</subject><subject>Biomedical and Life Sciences</subject><subject>Cell Biology</subject><subject>Cell Cycle</subject><subject>Cell division</subject><subject>Cell walls</subject><subject>Cerebrospinal fluid</subject><subject>Chitin</subject><subject>Chitin - biosynthesis</subject><subject>Cryptococcosis - microbiology</subject><subject>Cryptococcus neoformans - physiology</subject><subject>Fungal infections</subject><subject>Fungi</subject><subject>Fungicides</subject><subject>G protein-coupled receptors</subject><subject>Gene expression</subject><subject>Gene Expression Regulation, Fungal</subject><subject>Gene Regulatory Networks</subject><subject>Genes</subject><subject>Genomics</subject><subject>Infectious diseases</subject><subject>Life Sciences</subject><subject>Medical treatment</subject><subject>Meningitis</subject><subject>Microbial Genetics and Genomics</subject><subject>Microbiology</subject><subject>Orthology</subject><subject>Pathogens</subject><subject>Plant Sciences</subject><subject>Protein Binding</subject><subject>Protein biosynthesis</subject><subject>Protein Subunits - genetics</subject><subject>Protein Subunits - metabolism</subject><subject>Proteomics</subject><subject>Receptors, G-Protein-Coupled - chemistry</subject><subject>Receptors, G-Protein-Coupled - metabolism</subject><subject>Review</subject><subject>Signal Transduction</subject><subject>Virulence</subject><subject>Virulence - genetics</subject><subject>Virulence factors</subject><subject>Virulence Factors - genetics</subject><issn>0172-8083</issn><issn>1432-0983</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2017</creationdate><recordtype>article</recordtype><recordid>eNp1kUtv1DAUhS1ERYfCD2CDIrFhY3r9ip0NEhrxkip1A2vL8VxnUmXswU5azb_H0ylVQWJly-e7xz4-hLxh8IEB6MsCwDtJgWkKrTFUPSMrJgWn0BnxnKyqwKkBI87Jy1JuABg3nX5BzrnhrdKSr0hYpxjRz2McmtsxLxNGj83ezds7dyjNnBqP00T9wU_1OKchYyljis0Ym3mLTVji4Kb7gTRgbNb5sJ-TT94vpYmYQso7F8srchbcVPD1w3pBfn75_GP9jV5df_2-_nRFvRLtTJXQKFEYDCha3ATu-g03TCvQsm46aJUKvemd6TsNXacZYlDAW-y4FLoVF-TjyXe_9DvceIxzdpPd53Hn8sEmN9q_lThu7ZBurWpBKSOqwfsHg5x-LVhmuxvL8QtcDbMUy4xWTHKpeUXf_YPepCXHGs-yToJUILmpFDtRPqdSMobHxzCwxxbtqUVby7LHFq2qM2-fpnic-FNbBfgJKFWKA-YnV__X9Tfc36nw</recordid><startdate>20171001</startdate><enddate>20171001</enddate><creator>Kelliher, Christina M.</creator><creator>Haase, Steven B.</creator><general>Springer Berlin Heidelberg</general><general>Springer Nature B.V</general><scope>C6C</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QL</scope><scope>7SS</scope><scope>7TK</scope><scope>7TM</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>8AO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M7N</scope><scope>M7P</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20171001</creationdate><title>Connecting virulence pathways to cell-cycle progression in the fungal pathogen Cryptococcus neoformans</title><author>Kelliher, Christina M. ; Haase, Steven B.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c536t-537e4e38efe36edf2abd28175074d2890655fb8ba8b9709971eef5026e9243763</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2017</creationdate><topic>Biochemistry</topic><topic>Biomedical and Life Sciences</topic><topic>Cell Biology</topic><topic>Cell Cycle</topic><topic>Cell division</topic><topic>Cell walls</topic><topic>Cerebrospinal fluid</topic><topic>Chitin</topic><topic>Chitin - biosynthesis</topic><topic>Cryptococcosis - microbiology</topic><topic>Cryptococcus neoformans - physiology</topic><topic>Fungal infections</topic><topic>Fungi</topic><topic>Fungicides</topic><topic>G protein-coupled receptors</topic><topic>Gene expression</topic><topic>Gene Expression Regulation, Fungal</topic><topic>Gene Regulatory Networks</topic><topic>Genes</topic><topic>Genomics</topic><topic>Infectious diseases</topic><topic>Life Sciences</topic><topic>Medical treatment</topic><topic>Meningitis</topic><topic>Microbial Genetics and Genomics</topic><topic>Microbiology</topic><topic>Orthology</topic><topic>Pathogens</topic><topic>Plant Sciences</topic><topic>Protein Binding</topic><topic>Protein biosynthesis</topic><topic>Protein Subunits - genetics</topic><topic>Protein Subunits - metabolism</topic><topic>Proteomics</topic><topic>Receptors, G-Protein-Coupled - chemistry</topic><topic>Receptors, G-Protein-Coupled - metabolism</topic><topic>Review</topic><topic>Signal Transduction</topic><topic>Virulence</topic><topic>Virulence - genetics</topic><topic>Virulence factors</topic><topic>Virulence Factors - genetics</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Kelliher, Christina M.</creatorcontrib><creatorcontrib>Haase, Steven B.</creatorcontrib><collection>Springer_OA刊</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Neurosciences Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>ProQuest - Health & Medical Complete保健、医学与药学数据库</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest Central</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>ProQuest Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>PML(ProQuest Medical Library)</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>ProQuest Biological Science Journals</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Current genetics</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Kelliher, Christina M.</au><au>Haase, Steven B.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Connecting virulence pathways to cell-cycle progression in the fungal pathogen Cryptococcus neoformans</atitle><jtitle>Current genetics</jtitle><stitle>Curr Genet</stitle><addtitle>Curr Genet</addtitle><date>2017-10-01</date><risdate>2017</risdate><volume>63</volume><issue>5</issue><spage>803</spage><epage>811</epage><pages>803-811</pages><issn>0172-8083</issn><eissn>1432-0983</eissn><abstract>Proliferation and host evasion are critical processes to understand at a basic biological level for improving infectious disease treatment options. The human fungal pathogen
Cryptococcus neoformans
causes fungal meningitis in immunocompromised individuals by proliferating in cerebrospinal fluid. Current antifungal drugs target “virulence factors” for disease, such as components of the cell wall and polysaccharide capsule in
C. neoformans
. However, mechanistic links between virulence pathways and the cell cycle are not as well studied. Recently, cell-cycle synchronized
C. neoformans
cells were profiled over time to identify gene expression dynamics (Kelliher et al., PLoS Genet 12(12):e1006453,
2016
). Almost 20% of all genes in the
C. neoformans
genome were periodically activated during the cell cycle in rich media, including 40 genes that have previously been implicated in virulence pathways. Here, we review important findings about cell-cycle-regulated genes in
C. neoformans
and provide two examples of virulence pathways—chitin synthesis and G-protein coupled receptor signaling—with their putative connections to cell division. We propose that a “comparative functional genomics” approach, leveraging gene expression timing during the cell cycle, orthology to genes in other fungal species, and previous experimental findings, can lead to mechanistic hypotheses connecting the cell cycle to fungal virulence.</abstract><cop>Berlin/Heidelberg</cop><pub>Springer Berlin Heidelberg</pub><pmid>28265742</pmid><doi>10.1007/s00294-017-0688-5</doi><tpages>9</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Biochemistry Biomedical and Life Sciences Cell Biology Cell Cycle Cell division Cell walls Cerebrospinal fluid Chitin Chitin - biosynthesis Cryptococcosis - microbiology Cryptococcus neoformans - physiology Fungal infections Fungi Fungicides G protein-coupled receptors Gene expression Gene Expression Regulation, Fungal Gene Regulatory Networks Genes Genomics Infectious diseases Life Sciences Medical treatment Meningitis Microbial Genetics and Genomics Microbiology Orthology Pathogens Plant Sciences Protein Binding Protein biosynthesis Protein Subunits - genetics Protein Subunits - metabolism Proteomics Receptors, G-Protein-Coupled - chemistry Receptors, G-Protein-Coupled - metabolism Review Signal Transduction Virulence Virulence - genetics Virulence factors Virulence Factors - genetics |
title | Connecting virulence pathways to cell-cycle progression in the fungal pathogen Cryptococcus neoformans |
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