Complete Draft Genome Sequence of an Extended-Spectrum β-Lactamase-Producing Citrobacter freundii Strain Recovered from the Intestine of a House Sparrow (Passer domesticus) in Germany, 2017

Here, we announce the genome of an extended-spectrum β-lactamase-producing strain isolated from the cecum of a house sparrow that was found dead in Berlin-Lichtenberg, Germany, in 2017. This isolate exhibits increased MICs for several antimicrobials and a comprehensive set of acquired resistance det...

Full description

Saved in:
Bibliographic Details
Published in:Genome announcements (Washington, DC) DC), 2018-06, Vol.6 (26)
Main Authors: Osieka, Valerie, Grobbel, Mirjam, Schmoger, Silvia, Szentiks, Claudia A, Irrgang, Alexandra, Käsbohrer, Annemarie, Tenhagen, Bernd-Alois, Hammerl, Jens A
Format: Article
Language:English
Subjects:
Antimicrobial agents
Deoxyribonucleic acid
DNA
Drug resistance
Genetic testing
Genomes
Prokaryotes
Public health
Veterinary medicine
Citations: Items that this one cites
Items that cite this one
Online Access:Get full text
Tags: Add Tag
No Tags, Be the first to tag this record!
cited_by cdi_FETCH-LOGICAL-c424t-8ad6da47846a46d0b38c6fa9b9d510d517fb78158f4a8617796182015284358a3
cites cdi_FETCH-LOGICAL-c424t-8ad6da47846a46d0b38c6fa9b9d510d517fb78158f4a8617796182015284358a3
container_end_page
container_issue 26
container_start_page
container_title Genome announcements (Washington, DC)
container_volume 6
creator Osieka, Valerie
Grobbel, Mirjam
Schmoger, Silvia
Szentiks, Claudia A
Irrgang, Alexandra
Käsbohrer, Annemarie
Tenhagen, Bernd-Alois
Hammerl, Jens A
description Here, we announce the genome of an extended-spectrum β-lactamase-producing strain isolated from the cecum of a house sparrow that was found dead in Berlin-Lichtenberg, Germany, in 2017. This isolate exhibits increased MICs for several antimicrobials and a comprehensive set of acquired resistance determinants potentially involved in horizontal gene transfer.
doi_str_mv 10.1128/genomeA.00599-18
format article
fullrecord <record><control><sourceid>proquest_pubme</sourceid><recordid>TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_6025936</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>2062829168</sourcerecordid><originalsourceid>FETCH-LOGICAL-c424t-8ad6da47846a46d0b38c6fa9b9d510d517fb78158f4a8617796182015284358a3</originalsourceid><addsrcrecordid>eNpdktFuFCEUhidGY5vae68MiTc16VRgGAZuTJq1bptsYuPqNWHgzHaaGRiBqfa1-gA-gs8k7a5NlYRAOD_f4Sd_Ubwm-IQQKt5vwPkRTk8wrqUsiXhW7FPCZSmoaJ4_2e8VhzFe4zxEPmLiZbFHpayZxNV-8Wvhx2mABOhj0F1CywcoWsP3GZwB5DukHTr7mcBZsOV6ApPCPKLfd-VKm6RHHaG8DN7OpncbtOhT8G0uQEBdgNnZvkfrFHTv0Bcw_gYC2FzxI0pXgC5cgph6t-2Dzv0cc-9Jh-B_oKNLHWPm2PygLDJzfIcyZglh1O72GFFMmlfFi04PEQ5360Hx7dPZ18V5ufq8vFicrkrDKEul0JZbzRrBuGbc4rYShndattLWBOfZdG0jSC06pgUnTSM5EZlfU8GqWujqoPiw5U5zO4I14LKnQU2hH3W4VV736t-K66_Uxt8ojmktK54BRztA8PlrY1JjHw0Mg3aQXSuKORVUEi6y9O1_0ms_B5ftZZXATVXXnGUV3qpM8DEG6B4fQ7C6z4fa5UM95EORe_CbpyYeL_xNQ_UHJPa6ZA</addsrcrecordid><sourcetype>Open Access Repository</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2080735564</pqid></control><display><type>article</type><title>Complete Draft Genome Sequence of an Extended-Spectrum β-Lactamase-Producing Citrobacter freundii Strain Recovered from the Intestine of a House Sparrow (Passer domesticus) in Germany, 2017</title><source>PubMed Central Free</source><source>American Society for Microbiology (ASM) Journals</source><creator>Osieka, Valerie ; Grobbel, Mirjam ; Schmoger, Silvia ; Szentiks, Claudia A ; Irrgang, Alexandra ; Käsbohrer, Annemarie ; Tenhagen, Bernd-Alois ; Hammerl, Jens A</creator><creatorcontrib>Osieka, Valerie ; Grobbel, Mirjam ; Schmoger, Silvia ; Szentiks, Claudia A ; Irrgang, Alexandra ; Käsbohrer, Annemarie ; Tenhagen, Bernd-Alois ; Hammerl, Jens A</creatorcontrib><description>Here, we announce the genome of an extended-spectrum β-lactamase-producing strain isolated from the cecum of a house sparrow that was found dead in Berlin-Lichtenberg, Germany, in 2017. This isolate exhibits increased MICs for several antimicrobials and a comprehensive set of acquired resistance determinants potentially involved in horizontal gene transfer.</description><identifier>ISSN: 2169-8287</identifier><identifier>EISSN: 2169-8287</identifier><identifier>EISSN: 2576-098X</identifier><identifier>DOI: 10.1128/genomeA.00599-18</identifier><identifier>PMID: 29954903</identifier><language>eng</language><publisher>United States: American Society for Microbiology</publisher><subject>Antimicrobial agents ; Deoxyribonucleic acid ; DNA ; Drug resistance ; Genetic testing ; Genomes ; Prokaryotes ; Public health ; Veterinary medicine</subject><ispartof>Genome announcements (Washington, DC), 2018-06, Vol.6 (26)</ispartof><rights>Copyright © 2018 Osieka et al.</rights><rights>Copyright © 2018 Osieka et al. This work is published under https://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>Copyright © 2018 Osieka et al. 2018 Osieka et al.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c424t-8ad6da47846a46d0b38c6fa9b9d510d517fb78158f4a8617796182015284358a3</citedby><cites>FETCH-LOGICAL-c424t-8ad6da47846a46d0b38c6fa9b9d510d517fb78158f4a8617796182015284358a3</cites><orcidid>0000-0003-1266-9978</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC6025936/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC6025936/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,885,3188,27924,27925,53791,53793</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/29954903$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Osieka, Valerie</creatorcontrib><creatorcontrib>Grobbel, Mirjam</creatorcontrib><creatorcontrib>Schmoger, Silvia</creatorcontrib><creatorcontrib>Szentiks, Claudia A</creatorcontrib><creatorcontrib>Irrgang, Alexandra</creatorcontrib><creatorcontrib>Käsbohrer, Annemarie</creatorcontrib><creatorcontrib>Tenhagen, Bernd-Alois</creatorcontrib><creatorcontrib>Hammerl, Jens A</creatorcontrib><title>Complete Draft Genome Sequence of an Extended-Spectrum β-Lactamase-Producing Citrobacter freundii Strain Recovered from the Intestine of a House Sparrow (Passer domesticus) in Germany, 2017</title><title>Genome announcements (Washington, DC)</title><addtitle>Genome Announc</addtitle><description>Here, we announce the genome of an extended-spectrum β-lactamase-producing strain isolated from the cecum of a house sparrow that was found dead in Berlin-Lichtenberg, Germany, in 2017. This isolate exhibits increased MICs for several antimicrobials and a comprehensive set of acquired resistance determinants potentially involved in horizontal gene transfer.</description><subject>Antimicrobial agents</subject><subject>Deoxyribonucleic acid</subject><subject>DNA</subject><subject>Drug resistance</subject><subject>Genetic testing</subject><subject>Genomes</subject><subject>Prokaryotes</subject><subject>Public health</subject><subject>Veterinary medicine</subject><issn>2169-8287</issn><issn>2169-8287</issn><issn>2576-098X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2018</creationdate><recordtype>article</recordtype><sourceid>PIMPY</sourceid><recordid>eNpdktFuFCEUhidGY5vae68MiTc16VRgGAZuTJq1bptsYuPqNWHgzHaaGRiBqfa1-gA-gs8k7a5NlYRAOD_f4Sd_Ubwm-IQQKt5vwPkRTk8wrqUsiXhW7FPCZSmoaJ4_2e8VhzFe4zxEPmLiZbFHpayZxNV-8Wvhx2mABOhj0F1CywcoWsP3GZwB5DukHTr7mcBZsOV6ApPCPKLfd-VKm6RHHaG8DN7OpncbtOhT8G0uQEBdgNnZvkfrFHTv0Bcw_gYC2FzxI0pXgC5cgph6t-2Dzv0cc-9Jh-B_oKNLHWPm2PygLDJzfIcyZglh1O72GFFMmlfFi04PEQ5360Hx7dPZ18V5ufq8vFicrkrDKEul0JZbzRrBuGbc4rYShndattLWBOfZdG0jSC06pgUnTSM5EZlfU8GqWujqoPiw5U5zO4I14LKnQU2hH3W4VV736t-K66_Uxt8ojmktK54BRztA8PlrY1JjHw0Mg3aQXSuKORVUEi6y9O1_0ms_B5ftZZXATVXXnGUV3qpM8DEG6B4fQ7C6z4fa5UM95EORe_CbpyYeL_xNQ_UHJPa6ZA</recordid><startdate>20180628</startdate><enddate>20180628</enddate><creator>Osieka, Valerie</creator><creator>Grobbel, Mirjam</creator><creator>Schmoger, Silvia</creator><creator>Szentiks, Claudia A</creator><creator>Irrgang, Alexandra</creator><creator>Käsbohrer, Annemarie</creator><creator>Tenhagen, Bernd-Alois</creator><creator>Hammerl, Jens A</creator><general>American Society for Microbiology</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7X7</scope><scope>7XB</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BENPR</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>K9.</scope><scope>M0S</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>7X8</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0003-1266-9978</orcidid></search><sort><creationdate>20180628</creationdate><title>Complete Draft Genome Sequence of an Extended-Spectrum β-Lactamase-Producing Citrobacter freundii Strain Recovered from the Intestine of a House Sparrow (Passer domesticus) in Germany, 2017</title><author>Osieka, Valerie ; Grobbel, Mirjam ; Schmoger, Silvia ; Szentiks, Claudia A ; Irrgang, Alexandra ; Käsbohrer, Annemarie ; Tenhagen, Bernd-Alois ; Hammerl, Jens A</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c424t-8ad6da47846a46d0b38c6fa9b9d510d517fb78158f4a8617796182015284358a3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2018</creationdate><topic>Antimicrobial agents</topic><topic>Deoxyribonucleic acid</topic><topic>DNA</topic><topic>Drug resistance</topic><topic>Genetic testing</topic><topic>Genomes</topic><topic>Prokaryotes</topic><topic>Public health</topic><topic>Veterinary medicine</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Osieka, Valerie</creatorcontrib><creatorcontrib>Grobbel, Mirjam</creatorcontrib><creatorcontrib>Schmoger, Silvia</creatorcontrib><creatorcontrib>Szentiks, Claudia A</creatorcontrib><creatorcontrib>Irrgang, Alexandra</creatorcontrib><creatorcontrib>Käsbohrer, Annemarie</creatorcontrib><creatorcontrib>Tenhagen, Bernd-Alois</creatorcontrib><creatorcontrib>Hammerl, Jens A</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>ProQuest_Health &amp; Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest Central</collection><collection>ProQuest Central Essentials</collection><collection>ProQuest Central</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Health &amp; Medical Complete (Alumni)</collection><collection>Health &amp; Medical Collection (Alumni Edition)</collection><collection>ProQuest Publicly Available Content database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Genome announcements (Washington, DC)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Osieka, Valerie</au><au>Grobbel, Mirjam</au><au>Schmoger, Silvia</au><au>Szentiks, Claudia A</au><au>Irrgang, Alexandra</au><au>Käsbohrer, Annemarie</au><au>Tenhagen, Bernd-Alois</au><au>Hammerl, Jens A</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Complete Draft Genome Sequence of an Extended-Spectrum β-Lactamase-Producing Citrobacter freundii Strain Recovered from the Intestine of a House Sparrow (Passer domesticus) in Germany, 2017</atitle><jtitle>Genome announcements (Washington, DC)</jtitle><addtitle>Genome Announc</addtitle><date>2018-06-28</date><risdate>2018</risdate><volume>6</volume><issue>26</issue><issn>2169-8287</issn><eissn>2169-8287</eissn><eissn>2576-098X</eissn><abstract>Here, we announce the genome of an extended-spectrum β-lactamase-producing strain isolated from the cecum of a house sparrow that was found dead in Berlin-Lichtenberg, Germany, in 2017. This isolate exhibits increased MICs for several antimicrobials and a comprehensive set of acquired resistance determinants potentially involved in horizontal gene transfer.</abstract><cop>United States</cop><pub>American Society for Microbiology</pub><pmid>29954903</pmid><doi>10.1128/genomeA.00599-18</doi><orcidid>https://orcid.org/0000-0003-1266-9978</orcidid><oa>free_for_read</oa></addata></record>
fulltext fulltext
identifier ISSN: 2169-8287
ispartof Genome announcements (Washington, DC), 2018-06, Vol.6 (26)
issn 2169-8287
2169-8287
2576-098X
language eng
recordid cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_6025936
source PubMed Central Free; American Society for Microbiology (ASM) Journals
subjects Antimicrobial agents
Deoxyribonucleic acid
DNA
Drug resistance
Genetic testing
Genomes
Prokaryotes
Public health
Veterinary medicine
title Complete Draft Genome Sequence of an Extended-Spectrum β-Lactamase-Producing Citrobacter freundii Strain Recovered from the Intestine of a House Sparrow (Passer domesticus) in Germany, 2017
url http://sfxeu10.hosted.exlibrisgroup.com/loughborough?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2024-12-24T12%3A16%3A33IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_pubme&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Complete%20Draft%20Genome%20Sequence%20of%20an%20Extended-Spectrum%20%CE%B2-Lactamase-Producing%20Citrobacter%20freundii%20Strain%20Recovered%20from%20the%20Intestine%20of%20a%20House%20Sparrow%20(Passer%20domesticus)%20in%20Germany,%202017&rft.jtitle=Genome%20announcements%20(Washington,%20DC)&rft.au=Osieka,%20Valerie&rft.date=2018-06-28&rft.volume=6&rft.issue=26&rft.issn=2169-8287&rft.eissn=2169-8287&rft_id=info:doi/10.1128/genomeA.00599-18&rft_dat=%3Cproquest_pubme%3E2062829168%3C/proquest_pubme%3E%3Cgrp_id%3Ecdi_FETCH-LOGICAL-c424t-8ad6da47846a46d0b38c6fa9b9d510d517fb78158f4a8617796182015284358a3%3C/grp_id%3E%3Coa%3E%3C/oa%3E%3Curl%3E%3C/url%3E&rft_id=info:oai/&rft_pqid=2080735564&rft_id=info:pmid/29954903&rfr_iscdi=true