ImageJ-MATLAB: a bidirectional framework for scientific image analysis interoperability

ImageJ-MATLAB is a lightweight Java library facilitating bi-directional interoperability between MATLAB and ImageJ. By defining a standard for translation between matrix and image data structures, researchers are empowered to select the best tool for their image-analysis tasks. Freely available exte...

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Bibliographic Details
Published in:Bioinformatics (Oxford, England) England), 2017-02, Vol.33 (4), p.629-630
Main Authors: Hiner, Mark C, Rueden, Curtis T, Eliceiri, Kevin W
Format: Article
Language:English
Subjects:
Algorithms
Animals
Applications Notes
Humans
Image Interpretation, Computer-Assisted - methods
Software
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Description
Summary:ImageJ-MATLAB is a lightweight Java library facilitating bi-directional interoperability between MATLAB and ImageJ. By defining a standard for translation between matrix and image data structures, researchers are empowered to select the best tool for their image-analysis tasks. Freely available extension to ImageJ2 ( http://imagej.net/Downloads ). Installation and use instructions available at http://imagej.net/MATLAB_Scripting. Tested with ImageJ 2.0.0-rc-54 , Java 1.8.0_66 and MATLAB R2015b. eliceiri@wisc.edu. Supplementary data are available at Bioinformatics online.
ISSN:1367-4803
1367-4811
DOI:10.1093/bioinformatics/btw681