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A DNA barcoding method for identifying and quantifying the composition of pollen species collected by European honeybees, Apis mellifera (Hymenoptera: Apidae)
The European honeybee, Apis mellifera L. (Hymenoptera: Apidae), is the most important crop pollinator, and there is an urgent need for a sustained supply of honeybee colonies. Understanding the availability of pollen resources around apiaries throughout the brood-rearing season is crucial to increas...
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Published in: | Applied entomology and zoology 2018-08, Vol.53 (3), p.353-361 |
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container_title | Applied entomology and zoology |
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creator | Kamo, Tsunashi Kusumoto, Yoshinobu Tokuoka, Yoshinori Okubo, Satoru Hayakawa, Hiroshi Yoshiyama, Mikio Kimura, Kiyoshi Konuma, Akihiro |
description | The European honeybee,
Apis mellifera
L. (Hymenoptera: Apidae), is the most important crop pollinator, and there is an urgent need for a sustained supply of honeybee colonies. Understanding the availability of pollen resources around apiaries throughout the brood-rearing season is crucial to increasing the number of colonies. However, detailed information on the floral resources used by honeybees is limited due to a scarcity of efficient methods for identifying pollen species composition. Therefore, we developed a DNA barcoding method for identifying the species of each pollen pellet and for quantifying the species composition by summing the weights of the pellets for each species. To establish the molecular biological protocol, we analyzed 1008 pellets collected between late July and early September 2016 from five hives placed in a forest/agricultural landscape of Hokkaido, northern Japan. Pollen was classified into 31 plant taxa, of which 29 were identified with satisfactory discrimination (25 species and 4 genera) using
trnL
-
trnF
and ITS2 as DNA barcoding regions together with available floral and phenological information. The remaining two taxa were classified to the species level using other DNA barcoding regions. Of the 1008 pollen pellets tested, 1005 (99.7%) were successfully identified. As an example of the use of this method, we demonstrated the change in species composition of pollen pellets collected each week for 9 weeks from the same hive. |
doi_str_mv | 10.1007/s13355-018-0565-9 |
format | article |
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Apis mellifera
L. (Hymenoptera: Apidae), is the most important crop pollinator, and there is an urgent need for a sustained supply of honeybee colonies. Understanding the availability of pollen resources around apiaries throughout the brood-rearing season is crucial to increasing the number of colonies. However, detailed information on the floral resources used by honeybees is limited due to a scarcity of efficient methods for identifying pollen species composition. Therefore, we developed a DNA barcoding method for identifying the species of each pollen pellet and for quantifying the species composition by summing the weights of the pellets for each species. To establish the molecular biological protocol, we analyzed 1008 pellets collected between late July and early September 2016 from five hives placed in a forest/agricultural landscape of Hokkaido, northern Japan. Pollen was classified into 31 plant taxa, of which 29 were identified with satisfactory discrimination (25 species and 4 genera) using
trnL
-
trnF
and ITS2 as DNA barcoding regions together with available floral and phenological information. The remaining two taxa were classified to the species level using other DNA barcoding regions. Of the 1008 pollen pellets tested, 1005 (99.7%) were successfully identified. As an example of the use of this method, we demonstrated the change in species composition of pollen pellets collected each week for 9 weeks from the same hive.</description><identifier>ISSN: 0003-6862</identifier><identifier>EISSN: 1347-605X</identifier><identifier>DOI: 10.1007/s13355-018-0565-9</identifier><identifier>PMID: 30100617</identifier><language>eng</language><publisher>Tokyo: Springer Japan</publisher><subject>Agriculture ; Apidae ; Apis mellifera ; Applied Ecology ; Bees ; Biomedical and Life Sciences ; Colonies ; Deoxyribonucleic acid ; DNA ; Entomology ; Environmental Management ; Genera ; Hymenoptera ; Life Sciences ; Original Research Paper ; Plant Pathology ; Pollen ; Species composition ; Zoology</subject><ispartof>Applied entomology and zoology, 2018-08, Vol.53 (3), p.353-361</ispartof><rights>The Author(s) 2018</rights><rights>Copyright Springer Science & Business Media 2018</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c607t-9e476d51aa136ee7b9ac64e2a716b80c380d6b0c2659cc1836ae7e961722bb5f3</citedby><cites>FETCH-LOGICAL-c607t-9e476d51aa136ee7b9ac64e2a716b80c380d6b0c2659cc1836ae7e961722bb5f3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>230,314,780,784,885,27923,27924</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/30100617$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Kamo, Tsunashi</creatorcontrib><creatorcontrib>Kusumoto, Yoshinobu</creatorcontrib><creatorcontrib>Tokuoka, Yoshinori</creatorcontrib><creatorcontrib>Okubo, Satoru</creatorcontrib><creatorcontrib>Hayakawa, Hiroshi</creatorcontrib><creatorcontrib>Yoshiyama, Mikio</creatorcontrib><creatorcontrib>Kimura, Kiyoshi</creatorcontrib><creatorcontrib>Konuma, Akihiro</creatorcontrib><title>A DNA barcoding method for identifying and quantifying the composition of pollen species collected by European honeybees, Apis mellifera (Hymenoptera: Apidae)</title><title>Applied entomology and zoology</title><addtitle>Appl Entomol Zool</addtitle><addtitle>Appl Entomol Zool</addtitle><description>The European honeybee,
Apis mellifera
L. (Hymenoptera: Apidae), is the most important crop pollinator, and there is an urgent need for a sustained supply of honeybee colonies. Understanding the availability of pollen resources around apiaries throughout the brood-rearing season is crucial to increasing the number of colonies. However, detailed information on the floral resources used by honeybees is limited due to a scarcity of efficient methods for identifying pollen species composition. Therefore, we developed a DNA barcoding method for identifying the species of each pollen pellet and for quantifying the species composition by summing the weights of the pellets for each species. To establish the molecular biological protocol, we analyzed 1008 pellets collected between late July and early September 2016 from five hives placed in a forest/agricultural landscape of Hokkaido, northern Japan. Pollen was classified into 31 plant taxa, of which 29 were identified with satisfactory discrimination (25 species and 4 genera) using
trnL
-
trnF
and ITS2 as DNA barcoding regions together with available floral and phenological information. The remaining two taxa were classified to the species level using other DNA barcoding regions. Of the 1008 pollen pellets tested, 1005 (99.7%) were successfully identified. As an example of the use of this method, we demonstrated the change in species composition of pollen pellets collected each week for 9 weeks from the same hive.</description><subject>Agriculture</subject><subject>Apidae</subject><subject>Apis mellifera</subject><subject>Applied Ecology</subject><subject>Bees</subject><subject>Biomedical and Life Sciences</subject><subject>Colonies</subject><subject>Deoxyribonucleic acid</subject><subject>DNA</subject><subject>Entomology</subject><subject>Environmental Management</subject><subject>Genera</subject><subject>Hymenoptera</subject><subject>Life Sciences</subject><subject>Original Research Paper</subject><subject>Plant Pathology</subject><subject>Pollen</subject><subject>Species composition</subject><subject>Zoology</subject><issn>0003-6862</issn><issn>1347-605X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2018</creationdate><recordtype>article</recordtype><recordid>eNp1UU1v1DAUjBCIbgs_gAuyxKWVCDzbGzvmgLQqhSJVcAGJm-U4L7uuEju1E6T8GX4rXm1ZPiRO1njmzfN4iuIZhVcUQL5OlPOqKoHWJVSiKtWDYkX5WpYCqm8PixUA8FLUgp0UpyndArC1qtePixMOeV5QuSp-bMi7TxvSmGhD6_yWDDjtQku6EIlr0U-uW_bXxrfkbjZHPO2Q2DCMIbnJBU9CR8bQ9-hJGtE6TJnN0E7YkmYhV3MMIxpPdsHj0iCml2QzupTX9b3rMBpyfr0M6MM4ZfBmT7YGL54UjzrTJ3x6f54VX99ffbm8Lm8-f_h4ubkprQA5lQrXUrQVNYZygSgbZaxYIzOSiqYGy2toRQOWiUpZS2suDEpU-QcYa5qq42fF24PvODcDtjYHj6bXY3SDiYsOxum_Ge92ehu-awEClKqzwfm9QQx3M6ZJDy7ZHM54DHPSDGqplFCMZ-mLf6S3YY4-x8sqyTgoLkVW0YPKxpBSxO74GAp6374-tK9z-3rfvlZ55vmfKY4Tv-rOAnYQpEz5Lcbfq__v-hOrH710</recordid><startdate>20180801</startdate><enddate>20180801</enddate><creator>Kamo, Tsunashi</creator><creator>Kusumoto, Yoshinobu</creator><creator>Tokuoka, Yoshinori</creator><creator>Okubo, Satoru</creator><creator>Hayakawa, Hiroshi</creator><creator>Yoshiyama, Mikio</creator><creator>Kimura, Kiyoshi</creator><creator>Konuma, Akihiro</creator><general>Springer Japan</general><general>Springer Nature B.V</general><scope>C6C</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7SS</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20180801</creationdate><title>A DNA barcoding method for identifying and quantifying the composition of pollen species collected by European honeybees, Apis mellifera (Hymenoptera: Apidae)</title><author>Kamo, Tsunashi ; Kusumoto, Yoshinobu ; Tokuoka, Yoshinori ; Okubo, Satoru ; Hayakawa, Hiroshi ; Yoshiyama, Mikio ; Kimura, Kiyoshi ; Konuma, Akihiro</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c607t-9e476d51aa136ee7b9ac64e2a716b80c380d6b0c2659cc1836ae7e961722bb5f3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2018</creationdate><topic>Agriculture</topic><topic>Apidae</topic><topic>Apis mellifera</topic><topic>Applied Ecology</topic><topic>Bees</topic><topic>Biomedical and Life Sciences</topic><topic>Colonies</topic><topic>Deoxyribonucleic acid</topic><topic>DNA</topic><topic>Entomology</topic><topic>Environmental Management</topic><topic>Genera</topic><topic>Hymenoptera</topic><topic>Life Sciences</topic><topic>Original Research Paper</topic><topic>Plant Pathology</topic><topic>Pollen</topic><topic>Species composition</topic><topic>Zoology</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Kamo, Tsunashi</creatorcontrib><creatorcontrib>Kusumoto, Yoshinobu</creatorcontrib><creatorcontrib>Tokuoka, Yoshinori</creatorcontrib><creatorcontrib>Okubo, Satoru</creatorcontrib><creatorcontrib>Hayakawa, Hiroshi</creatorcontrib><creatorcontrib>Yoshiyama, Mikio</creatorcontrib><creatorcontrib>Kimura, Kiyoshi</creatorcontrib><creatorcontrib>Konuma, Akihiro</creatorcontrib><collection>SpringerOpen</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Entomology Abstracts (Full archive)</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Applied entomology and zoology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Kamo, Tsunashi</au><au>Kusumoto, Yoshinobu</au><au>Tokuoka, Yoshinori</au><au>Okubo, Satoru</au><au>Hayakawa, Hiroshi</au><au>Yoshiyama, Mikio</au><au>Kimura, Kiyoshi</au><au>Konuma, Akihiro</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>A DNA barcoding method for identifying and quantifying the composition of pollen species collected by European honeybees, Apis mellifera (Hymenoptera: Apidae)</atitle><jtitle>Applied entomology and zoology</jtitle><stitle>Appl Entomol Zool</stitle><addtitle>Appl Entomol Zool</addtitle><date>2018-08-01</date><risdate>2018</risdate><volume>53</volume><issue>3</issue><spage>353</spage><epage>361</epage><pages>353-361</pages><issn>0003-6862</issn><eissn>1347-605X</eissn><abstract>The European honeybee,
Apis mellifera
L. (Hymenoptera: Apidae), is the most important crop pollinator, and there is an urgent need for a sustained supply of honeybee colonies. Understanding the availability of pollen resources around apiaries throughout the brood-rearing season is crucial to increasing the number of colonies. However, detailed information on the floral resources used by honeybees is limited due to a scarcity of efficient methods for identifying pollen species composition. Therefore, we developed a DNA barcoding method for identifying the species of each pollen pellet and for quantifying the species composition by summing the weights of the pellets for each species. To establish the molecular biological protocol, we analyzed 1008 pellets collected between late July and early September 2016 from five hives placed in a forest/agricultural landscape of Hokkaido, northern Japan. Pollen was classified into 31 plant taxa, of which 29 were identified with satisfactory discrimination (25 species and 4 genera) using
trnL
-
trnF
and ITS2 as DNA barcoding regions together with available floral and phenological information. The remaining two taxa were classified to the species level using other DNA barcoding regions. Of the 1008 pollen pellets tested, 1005 (99.7%) were successfully identified. As an example of the use of this method, we demonstrated the change in species composition of pollen pellets collected each week for 9 weeks from the same hive.</abstract><cop>Tokyo</cop><pub>Springer Japan</pub><pmid>30100617</pmid><doi>10.1007/s13355-018-0565-9</doi><tpages>9</tpages><oa>free_for_read</oa></addata></record> |
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source | Springer Nature |
subjects | Agriculture Apidae Apis mellifera Applied Ecology Bees Biomedical and Life Sciences Colonies Deoxyribonucleic acid DNA Entomology Environmental Management Genera Hymenoptera Life Sciences Original Research Paper Plant Pathology Pollen Species composition Zoology |
title | A DNA barcoding method for identifying and quantifying the composition of pollen species collected by European honeybees, Apis mellifera (Hymenoptera: Apidae) |
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