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Chroman-4-One Derivatives Targeting Pteridine Reductase 1 and Showing Anti-Parasitic Activity
Flavonoids have previously been identified as antiparasitic agents and pteridine reductase 1 (PTR1) inhibitors. Herein, we focus our attention on the chroman-4-one scaffold. Three chroman-4-one analogues ( - ) of previously published chromen-4-one derivatives were synthesized and biologically evalua...
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Published in: | Molecules (Basel, Switzerland) Switzerland), 2017-03, Vol.22 (3), p.426 |
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creator | Di Pisa, Flavio Landi, Giacomo Dello Iacono, Lucia Pozzi, Cecilia Borsari, Chiara Ferrari, Stefania Santucci, Matteo Santarem, Nuno Cordeiro-da-Silva, Anabela Moraes, Carolina B Alcantara, Laura M Fontana, Vanessa Freitas-Junior, Lucio H Gul, Sheraz Kuzikov, Maria Behrens, Birte Pöhner, Ina Wade, Rebecca C Costi, Maria Paola Mangani, Stefano |
description | Flavonoids have previously been identified as antiparasitic agents and pteridine reductase 1 (PTR1) inhibitors. Herein, we focus our attention on the chroman-4-one scaffold. Three chroman-4-one analogues (
-
) of previously published chromen-4-one derivatives were synthesized and biologically evaluated against parasitic enzymes (
PTR1-
PTR1 and
PTR1) and parasites (
and
). A crystal structure of
PTR1 in complex with compound
and the first crystal structures of
PTR1-flavanone complexes (compounds
and
) were solved. The inhibitory activity of the chroman-4-one and chromen-4-one derivatives was explained by comparison of observed and predicted binding modes of the compounds. Compound
showed activity both against the targeted enzymes and the parasites with a selectivity index greater than 7 and a low toxicity. Our results provide a basis for further scaffold optimization and structure-based drug design aimed at the identification of potent anti-trypanosomatidic compounds targeting multiple PTR1 variants. |
doi_str_mv | 10.3390/molecules22030426 |
format | article |
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-
) of previously published chromen-4-one derivatives were synthesized and biologically evaluated against parasitic enzymes (
PTR1-
PTR1 and
PTR1) and parasites (
and
). A crystal structure of
PTR1 in complex with compound
and the first crystal structures of
PTR1-flavanone complexes (compounds
and
) were solved. The inhibitory activity of the chroman-4-one and chromen-4-one derivatives was explained by comparison of observed and predicted binding modes of the compounds. Compound
showed activity both against the targeted enzymes and the parasites with a selectivity index greater than 7 and a low toxicity. Our results provide a basis for further scaffold optimization and structure-based drug design aimed at the identification of potent anti-trypanosomatidic compounds targeting multiple PTR1 variants.</description><identifier>ISSN: 1420-3049</identifier><identifier>EISSN: 1420-3049</identifier><identifier>DOI: 10.3390/molecules22030426</identifier><identifier>PMID: 28282886</identifier><language>eng</language><publisher>Switzerland: MDPI AG</publisher><subject>Antiparasitic agents ; Antiparasitic Agents - chemical synthesis ; Antiparasitic Agents - chemistry ; Antiparasitic Agents - pharmacology ; Binding Sites ; Chromans - chemical synthesis ; Chromans - chemistry ; Chromans - pharmacology ; Crystal structure ; Design optimization ; Drug development ; Enzyme Activation - drug effects ; Enzymes ; Flavonoids ; Inhibitory Concentration 50 ; Leishmania major - drug effects ; Leishmania major - enzymology ; Molecular Conformation ; Molecular Docking Simulation ; Molecular Dynamics Simulation ; Molecular Structure ; Oxidoreductases - antagonists & inhibitors ; Oxidoreductases - chemistry ; Parasites ; Protein Binding ; Protozoa ; Reductase ; Reductases ; Scaffolds ; Selectivity ; Toxicity ; Trypanosoma brucei ; Trypanosoma brucei brucei - drug effects ; Trypanosoma brucei brucei - enzymology</subject><ispartof>Molecules (Basel, Switzerland), 2017-03, Vol.22 (3), p.426</ispartof><rights>Copyright MDPI AG 2017</rights><rights>2017 by the authors. 2017</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c427t-c3a1368277fbe4fca82b2822abea734110bbc9b8f0798b7c6bcf9abd6dafd00b3</citedby><cites>FETCH-LOGICAL-c427t-c3a1368277fbe4fca82b2822abea734110bbc9b8f0798b7c6bcf9abd6dafd00b3</cites><orcidid>0000-0003-2392-6087 ; 0000-0001-6332-166X ; 0000-0001-5951-8670 ; 0000-0002-0443-5402 ; 0000-0003-2574-3911 ; 0000-0002-4688-8362 ; 0000-0003-1149-5953 ; 0000-0003-2543-1643 ; 0000-0003-4824-7478</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.proquest.com/docview/1889004329/fulltextPDF?pq-origsite=primo$$EPDF$$P50$$Gproquest$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.proquest.com/docview/1889004329?pq-origsite=primo$$EHTML$$P50$$Gproquest$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,885,25752,27923,27924,37011,37012,44589,53790,53792,74897</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/28282886$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Di Pisa, Flavio</creatorcontrib><creatorcontrib>Landi, Giacomo</creatorcontrib><creatorcontrib>Dello Iacono, Lucia</creatorcontrib><creatorcontrib>Pozzi, Cecilia</creatorcontrib><creatorcontrib>Borsari, Chiara</creatorcontrib><creatorcontrib>Ferrari, Stefania</creatorcontrib><creatorcontrib>Santucci, Matteo</creatorcontrib><creatorcontrib>Santarem, Nuno</creatorcontrib><creatorcontrib>Cordeiro-da-Silva, Anabela</creatorcontrib><creatorcontrib>Moraes, Carolina B</creatorcontrib><creatorcontrib>Alcantara, Laura M</creatorcontrib><creatorcontrib>Fontana, Vanessa</creatorcontrib><creatorcontrib>Freitas-Junior, Lucio H</creatorcontrib><creatorcontrib>Gul, Sheraz</creatorcontrib><creatorcontrib>Kuzikov, Maria</creatorcontrib><creatorcontrib>Behrens, Birte</creatorcontrib><creatorcontrib>Pöhner, Ina</creatorcontrib><creatorcontrib>Wade, Rebecca C</creatorcontrib><creatorcontrib>Costi, Maria Paola</creatorcontrib><creatorcontrib>Mangani, Stefano</creatorcontrib><title>Chroman-4-One Derivatives Targeting Pteridine Reductase 1 and Showing Anti-Parasitic Activity</title><title>Molecules (Basel, Switzerland)</title><addtitle>Molecules</addtitle><description>Flavonoids have previously been identified as antiparasitic agents and pteridine reductase 1 (PTR1) inhibitors. Herein, we focus our attention on the chroman-4-one scaffold. Three chroman-4-one analogues (
-
) of previously published chromen-4-one derivatives were synthesized and biologically evaluated against parasitic enzymes (
PTR1-
PTR1 and
PTR1) and parasites (
and
). A crystal structure of
PTR1 in complex with compound
and the first crystal structures of
PTR1-flavanone complexes (compounds
and
) were solved. The inhibitory activity of the chroman-4-one and chromen-4-one derivatives was explained by comparison of observed and predicted binding modes of the compounds. Compound
showed activity both against the targeted enzymes and the parasites with a selectivity index greater than 7 and a low toxicity. Our results provide a basis for further scaffold optimization and structure-based drug design aimed at the identification of potent anti-trypanosomatidic compounds targeting multiple PTR1 variants.</description><subject>Antiparasitic agents</subject><subject>Antiparasitic Agents - chemical synthesis</subject><subject>Antiparasitic Agents - chemistry</subject><subject>Antiparasitic Agents - pharmacology</subject><subject>Binding Sites</subject><subject>Chromans - chemical synthesis</subject><subject>Chromans - chemistry</subject><subject>Chromans - pharmacology</subject><subject>Crystal structure</subject><subject>Design optimization</subject><subject>Drug development</subject><subject>Enzyme Activation - drug effects</subject><subject>Enzymes</subject><subject>Flavonoids</subject><subject>Inhibitory Concentration 50</subject><subject>Leishmania major - drug effects</subject><subject>Leishmania major - enzymology</subject><subject>Molecular Conformation</subject><subject>Molecular Docking Simulation</subject><subject>Molecular Dynamics Simulation</subject><subject>Molecular Structure</subject><subject>Oxidoreductases - antagonists & inhibitors</subject><subject>Oxidoreductases - chemistry</subject><subject>Parasites</subject><subject>Protein Binding</subject><subject>Protozoa</subject><subject>Reductase</subject><subject>Reductases</subject><subject>Scaffolds</subject><subject>Selectivity</subject><subject>Toxicity</subject><subject>Trypanosoma brucei</subject><subject>Trypanosoma brucei brucei - drug effects</subject><subject>Trypanosoma brucei brucei - enzymology</subject><issn>1420-3049</issn><issn>1420-3049</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2017</creationdate><recordtype>article</recordtype><sourceid>PIMPY</sourceid><recordid>eNplkU1P3DAQhi3UCijtD-CCIvXCJa2_1kkuSKulXxISqKXHyho7k12jxAbbWcS_r1dQRFvNwTOeZ17N6CXkmNEPQnT04xRGtPOIiXMqqORqjxwyyWldiu7Vi_yAvEnphlLOJFvskwPe7qJVh-TXahPDBL6W9aXH6hyj20J2W0zVNcQ1ZufX1VUu370r_e_YzzZDwopV4Pvqxybc74ilz66-ggjJZWerpS0SLj-8Ja8HGBO-e3qPyM_Pn65XX-uLyy_fVsuL2kre5NoKYEK1vGkGg3Kw0HJTFuRgEBohGaPG2M60A2261jRWGTt0YHrVw9BTasQROXvUvZ3NhL1FnyOM-ja6CeKDDuD03x3vNnodtlqxxYI3vAicPgnEcDdjynpyyeI4gscwJ83aRsmOKaEK-v4f9CbM0ZfzCtV2lErBu0KxR8rGkFLE4XkZRvXOPP2feWXm5OUVzxN_3BK_ARHymX4</recordid><startdate>20170308</startdate><enddate>20170308</enddate><creator>Di Pisa, Flavio</creator><creator>Landi, Giacomo</creator><creator>Dello Iacono, Lucia</creator><creator>Pozzi, Cecilia</creator><creator>Borsari, Chiara</creator><creator>Ferrari, Stefania</creator><creator>Santucci, Matteo</creator><creator>Santarem, Nuno</creator><creator>Cordeiro-da-Silva, Anabela</creator><creator>Moraes, Carolina B</creator><creator>Alcantara, Laura M</creator><creator>Fontana, Vanessa</creator><creator>Freitas-Junior, Lucio H</creator><creator>Gul, Sheraz</creator><creator>Kuzikov, Maria</creator><creator>Behrens, Birte</creator><creator>Pöhner, Ina</creator><creator>Wade, Rebecca C</creator><creator>Costi, Maria Paola</creator><creator>Mangani, Stefano</creator><general>MDPI AG</general><general>MDPI</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BENPR</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>K9.</scope><scope>M0S</scope><scope>M1P</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>7X8</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0003-2392-6087</orcidid><orcidid>https://orcid.org/0000-0001-6332-166X</orcidid><orcidid>https://orcid.org/0000-0001-5951-8670</orcidid><orcidid>https://orcid.org/0000-0002-0443-5402</orcidid><orcidid>https://orcid.org/0000-0003-2574-3911</orcidid><orcidid>https://orcid.org/0000-0002-4688-8362</orcidid><orcidid>https://orcid.org/0000-0003-1149-5953</orcidid><orcidid>https://orcid.org/0000-0003-2543-1643</orcidid><orcidid>https://orcid.org/0000-0003-4824-7478</orcidid></search><sort><creationdate>20170308</creationdate><title>Chroman-4-One Derivatives Targeting Pteridine Reductase 1 and Showing Anti-Parasitic Activity</title><author>Di Pisa, Flavio ; Landi, Giacomo ; Dello Iacono, Lucia ; Pozzi, Cecilia ; Borsari, Chiara ; Ferrari, Stefania ; Santucci, Matteo ; Santarem, Nuno ; Cordeiro-da-Silva, Anabela ; Moraes, Carolina B ; Alcantara, Laura M ; Fontana, Vanessa ; Freitas-Junior, Lucio H ; Gul, Sheraz ; Kuzikov, Maria ; Behrens, Birte ; Pöhner, Ina ; Wade, Rebecca C ; Costi, Maria Paola ; Mangani, Stefano</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c427t-c3a1368277fbe4fca82b2822abea734110bbc9b8f0798b7c6bcf9abd6dafd00b3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2017</creationdate><topic>Antiparasitic agents</topic><topic>Antiparasitic Agents - chemical synthesis</topic><topic>Antiparasitic Agents - chemistry</topic><topic>Antiparasitic Agents - pharmacology</topic><topic>Binding Sites</topic><topic>Chromans - chemical synthesis</topic><topic>Chromans - chemistry</topic><topic>Chromans - pharmacology</topic><topic>Crystal structure</topic><topic>Design optimization</topic><topic>Drug development</topic><topic>Enzyme Activation - drug effects</topic><topic>Enzymes</topic><topic>Flavonoids</topic><topic>Inhibitory Concentration 50</topic><topic>Leishmania major - drug effects</topic><topic>Leishmania major - enzymology</topic><topic>Molecular Conformation</topic><topic>Molecular Docking Simulation</topic><topic>Molecular Dynamics Simulation</topic><topic>Molecular Structure</topic><topic>Oxidoreductases - antagonists & inhibitors</topic><topic>Oxidoreductases - chemistry</topic><topic>Parasites</topic><topic>Protein Binding</topic><topic>Protozoa</topic><topic>Reductase</topic><topic>Reductases</topic><topic>Scaffolds</topic><topic>Selectivity</topic><topic>Toxicity</topic><topic>Trypanosoma brucei</topic><topic>Trypanosoma brucei brucei - drug effects</topic><topic>Trypanosoma brucei brucei - enzymology</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Di Pisa, Flavio</creatorcontrib><creatorcontrib>Landi, Giacomo</creatorcontrib><creatorcontrib>Dello Iacono, Lucia</creatorcontrib><creatorcontrib>Pozzi, Cecilia</creatorcontrib><creatorcontrib>Borsari, Chiara</creatorcontrib><creatorcontrib>Ferrari, Stefania</creatorcontrib><creatorcontrib>Santucci, Matteo</creatorcontrib><creatorcontrib>Santarem, Nuno</creatorcontrib><creatorcontrib>Cordeiro-da-Silva, Anabela</creatorcontrib><creatorcontrib>Moraes, Carolina B</creatorcontrib><creatorcontrib>Alcantara, Laura M</creatorcontrib><creatorcontrib>Fontana, Vanessa</creatorcontrib><creatorcontrib>Freitas-Junior, Lucio H</creatorcontrib><creatorcontrib>Gul, Sheraz</creatorcontrib><creatorcontrib>Kuzikov, Maria</creatorcontrib><creatorcontrib>Behrens, Birte</creatorcontrib><creatorcontrib>Pöhner, Ina</creatorcontrib><creatorcontrib>Wade, Rebecca C</creatorcontrib><creatorcontrib>Costi, Maria Paola</creatorcontrib><creatorcontrib>Mangani, Stefano</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>ProQuest Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest Central</collection><collection>ProQuest Central Essentials</collection><collection>AUTh Library subscriptions: ProQuest Central</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Publicly Available Content Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Molecules (Basel, Switzerland)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Di Pisa, Flavio</au><au>Landi, Giacomo</au><au>Dello Iacono, Lucia</au><au>Pozzi, Cecilia</au><au>Borsari, Chiara</au><au>Ferrari, Stefania</au><au>Santucci, Matteo</au><au>Santarem, Nuno</au><au>Cordeiro-da-Silva, Anabela</au><au>Moraes, Carolina B</au><au>Alcantara, Laura M</au><au>Fontana, Vanessa</au><au>Freitas-Junior, Lucio H</au><au>Gul, Sheraz</au><au>Kuzikov, Maria</au><au>Behrens, Birte</au><au>Pöhner, Ina</au><au>Wade, Rebecca C</au><au>Costi, Maria Paola</au><au>Mangani, Stefano</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Chroman-4-One Derivatives Targeting Pteridine Reductase 1 and Showing Anti-Parasitic Activity</atitle><jtitle>Molecules (Basel, Switzerland)</jtitle><addtitle>Molecules</addtitle><date>2017-03-08</date><risdate>2017</risdate><volume>22</volume><issue>3</issue><spage>426</spage><pages>426-</pages><issn>1420-3049</issn><eissn>1420-3049</eissn><abstract>Flavonoids have previously been identified as antiparasitic agents and pteridine reductase 1 (PTR1) inhibitors. Herein, we focus our attention on the chroman-4-one scaffold. Three chroman-4-one analogues (
-
) of previously published chromen-4-one derivatives were synthesized and biologically evaluated against parasitic enzymes (
PTR1-
PTR1 and
PTR1) and parasites (
and
). A crystal structure of
PTR1 in complex with compound
and the first crystal structures of
PTR1-flavanone complexes (compounds
and
) were solved. The inhibitory activity of the chroman-4-one and chromen-4-one derivatives was explained by comparison of observed and predicted binding modes of the compounds. Compound
showed activity both against the targeted enzymes and the parasites with a selectivity index greater than 7 and a low toxicity. Our results provide a basis for further scaffold optimization and structure-based drug design aimed at the identification of potent anti-trypanosomatidic compounds targeting multiple PTR1 variants.</abstract><cop>Switzerland</cop><pub>MDPI AG</pub><pmid>28282886</pmid><doi>10.3390/molecules22030426</doi><orcidid>https://orcid.org/0000-0003-2392-6087</orcidid><orcidid>https://orcid.org/0000-0001-6332-166X</orcidid><orcidid>https://orcid.org/0000-0001-5951-8670</orcidid><orcidid>https://orcid.org/0000-0002-0443-5402</orcidid><orcidid>https://orcid.org/0000-0003-2574-3911</orcidid><orcidid>https://orcid.org/0000-0002-4688-8362</orcidid><orcidid>https://orcid.org/0000-0003-1149-5953</orcidid><orcidid>https://orcid.org/0000-0003-2543-1643</orcidid><orcidid>https://orcid.org/0000-0003-4824-7478</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Antiparasitic agents Antiparasitic Agents - chemical synthesis Antiparasitic Agents - chemistry Antiparasitic Agents - pharmacology Binding Sites Chromans - chemical synthesis Chromans - chemistry Chromans - pharmacology Crystal structure Design optimization Drug development Enzyme Activation - drug effects Enzymes Flavonoids Inhibitory Concentration 50 Leishmania major - drug effects Leishmania major - enzymology Molecular Conformation Molecular Docking Simulation Molecular Dynamics Simulation Molecular Structure Oxidoreductases - antagonists & inhibitors Oxidoreductases - chemistry Parasites Protein Binding Protozoa Reductase Reductases Scaffolds Selectivity Toxicity Trypanosoma brucei Trypanosoma brucei brucei - drug effects Trypanosoma brucei brucei - enzymology |
title | Chroman-4-One Derivatives Targeting Pteridine Reductase 1 and Showing Anti-Parasitic Activity |
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