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Caval to pulmonary 3D flow distribution in patients with Fontan circulation and impact of potential 4D flow MRI error sources
Purpose Uneven flow distribution in patients with Fontan circulation is suspected to lead to complications. 4D flow MRI offers evaluation using time‐resolved pathlines; however, the potential error is not well understood. The aim of this study was to systematically assess variability in flow distrib...
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Published in: | Magnetic resonance in medicine 2019-02, Vol.81 (2), p.1205-1218 |
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creator | Jarvis, Kelly Schnell, Susanne Barker, Alex J. Rose, Michael Robinson, Joshua D. Rigsby, Cynthia K. Markl, Michael |
description | Purpose
Uneven flow distribution in patients with Fontan circulation is suspected to lead to complications. 4D flow MRI offers evaluation using time‐resolved pathlines; however, the potential error is not well understood. The aim of this study was to systematically assess variability in flow distribution caused by well‐known sources of error.
Methods
4D flow MRI was acquired in 14 patients with Fontan circulation. Flow distribution was quantified by the % of caval venous flow pathlines reaching the left and right pulmonary arteries. Impact of data acquisition and data processing uncertainties were investigated by (1) probabilistic 4D blood flow tracking at varying noise levels, (2) down‐sampling to mimic acquisition at different spatial resolutions, (3) pathline calculation with and without eddy current correction, and (4) varied segmentation of the Fontan geometry to mimic analysis errors.
Results
Averaged among the cohort, uncertainties accounted for flow distribution errors from noise ≤3.2%, low spatial resolution ≤2.3% to 3.8%, eddy currents ≤6.4%, and inaccurate segmentation ≤3.9% to 9.1% (dilation and erosion, respectively). In a worst‐case scenario (maximum additive errors for all 4 sources), flow distribution errors were as high as 22.5%.
Conclusion
Inaccuracies related to postprocessing (segmentation, eddy currents) resulted in the largest potential error (≤15.5% combined) whereas errors related to data acquisition (noise, low spatial resolution) had a lower impact (≤5.5%‐7.0% combined). Whereas it is unlikely that these errors will be additive or affect the identification of severe asymmetry, these results illustrate the importance of eddy current correction and accurate segmentation to minimize Fontan flow distribution errors. |
doi_str_mv | 10.1002/mrm.27455 |
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fullrecord | <record><control><sourceid>proquest_pubme</sourceid><recordid>TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_6289652</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>2153941204</sourcerecordid><originalsourceid>FETCH-LOGICAL-c4435-a2bef829e606e5c6a2425f41a5c097a2ebae786c5ef042386e20a2e417c1753f3</originalsourceid><addsrcrecordid>eNp1kUFLHDEYhoO06Nb24B-QQC_tYTT5kkx2LoJsayu4FKQ9h2w2o5FMMiYZFw_9703drdRCT4EvDw_vy4vQESUnlBA4HdJwApILsYdmVAA0IDr-Cs2I5KRhtOMH6E3Od4SQrpN8Hx0wAlKCbGfo50I_aI9LxOPkhxh0esTsE-593OC1yyW51VRcDNgFPOribCgZb1y5xRcxFB2wcclMXj8xOqyxG0ZtCo49HmOptKt2vhMury-xTSkmnOOUjM1v0ete-2zf7d5D9OPi8_fF1-bq25fLxflVYzhnotGwsv0cOtuS1grTauAgek61MKSTGuxKWzlvjbA94cDmrQVSr5xKQ6VgPTtEZ1vvOK0GuzY1V9JejckNtbCK2qmXP8Hdqpv4oFqYd62AKviwE6R4P9lc1OCysd7rYOOUFVAqpKCSsYq-_we9q2VDrVcpwTpOgfBKfdxSJsWck-2fw1Cifo-q6qjqadTKHv-d_pn8s2IFTrfAxnn7-H-TWl4vt8pfHCOtPg</addsrcrecordid><sourcetype>Open Access Repository</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2153941204</pqid></control><display><type>article</type><title>Caval to pulmonary 3D flow distribution in patients with Fontan circulation and impact of potential 4D flow MRI error sources</title><source>Wiley</source><creator>Jarvis, Kelly ; Schnell, Susanne ; Barker, Alex J. ; Rose, Michael ; Robinson, Joshua D. ; Rigsby, Cynthia K. ; Markl, Michael</creator><creatorcontrib>Jarvis, Kelly ; Schnell, Susanne ; Barker, Alex J. ; Rose, Michael ; Robinson, Joshua D. ; Rigsby, Cynthia K. ; Markl, Michael</creatorcontrib><description>Purpose
Uneven flow distribution in patients with Fontan circulation is suspected to lead to complications. 4D flow MRI offers evaluation using time‐resolved pathlines; however, the potential error is not well understood. The aim of this study was to systematically assess variability in flow distribution caused by well‐known sources of error.
Methods
4D flow MRI was acquired in 14 patients with Fontan circulation. Flow distribution was quantified by the % of caval venous flow pathlines reaching the left and right pulmonary arteries. Impact of data acquisition and data processing uncertainties were investigated by (1) probabilistic 4D blood flow tracking at varying noise levels, (2) down‐sampling to mimic acquisition at different spatial resolutions, (3) pathline calculation with and without eddy current correction, and (4) varied segmentation of the Fontan geometry to mimic analysis errors.
Results
Averaged among the cohort, uncertainties accounted for flow distribution errors from noise ≤3.2%, low spatial resolution ≤2.3% to 3.8%, eddy currents ≤6.4%, and inaccurate segmentation ≤3.9% to 9.1% (dilation and erosion, respectively). In a worst‐case scenario (maximum additive errors for all 4 sources), flow distribution errors were as high as 22.5%.
Conclusion
Inaccuracies related to postprocessing (segmentation, eddy currents) resulted in the largest potential error (≤15.5% combined) whereas errors related to data acquisition (noise, low spatial resolution) had a lower impact (≤5.5%‐7.0% combined). Whereas it is unlikely that these errors will be additive or affect the identification of severe asymmetry, these results illustrate the importance of eddy current correction and accurate segmentation to minimize Fontan flow distribution errors.</description><identifier>ISSN: 0740-3194</identifier><identifier>EISSN: 1522-2594</identifier><identifier>DOI: 10.1002/mrm.27455</identifier><identifier>PMID: 30277276</identifier><language>eng</language><publisher>United States: Wiley Subscription Services, Inc</publisher><subject>4D flow MRI ; Adolescent ; Adult ; Algorithms ; Arteries ; background phase errors ; Blood flow ; Blood Flow Velocity ; Child ; Complications ; congenital heart disease ; Coronary Circulation ; Data acquisition ; Data processing ; Eddy currents ; Erosion ; Facilities management ; Female ; Flow distribution ; Fontan circulation ; Fontan Procedure ; Heart Defects, Congenital - diagnostic imaging ; Heart Defects, Congenital - physiopathology ; Heart Defects, Congenital - surgery ; Heart surgery ; Hemodynamics ; Humans ; Image Interpretation, Computer-Assisted - methods ; Image processing ; Image Processing, Computer-Assisted - methods ; Imaging, Three-Dimensional - methods ; Magnetic Resonance Imaging ; Male ; Motion ; Noise ; Noise levels ; Patients ; probabilistic tracking ; Pulmonary arteries ; Pulmonary artery ; Pulmonary Artery - diagnostic imaging ; Pulmonary Circulation ; Reproducibility of Results ; Segmentation ; Spatial data ; Spatial discrimination ; Spatial resolution ; Three dimensional flow ; Uncertainty ; velocity noise ; Young Adult</subject><ispartof>Magnetic resonance in medicine, 2019-02, Vol.81 (2), p.1205-1218</ispartof><rights>2018 International Society for Magnetic Resonance in Medicine</rights><rights>2018 International Society for Magnetic Resonance in Medicine.</rights><rights>2019 International Society for Magnetic Resonance in Medicine</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c4435-a2bef829e606e5c6a2425f41a5c097a2ebae786c5ef042386e20a2e417c1753f3</citedby><cites>FETCH-LOGICAL-c4435-a2bef829e606e5c6a2425f41a5c097a2ebae786c5ef042386e20a2e417c1753f3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>230,314,780,784,885,27923,27924</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/30277276$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Jarvis, Kelly</creatorcontrib><creatorcontrib>Schnell, Susanne</creatorcontrib><creatorcontrib>Barker, Alex J.</creatorcontrib><creatorcontrib>Rose, Michael</creatorcontrib><creatorcontrib>Robinson, Joshua D.</creatorcontrib><creatorcontrib>Rigsby, Cynthia K.</creatorcontrib><creatorcontrib>Markl, Michael</creatorcontrib><title>Caval to pulmonary 3D flow distribution in patients with Fontan circulation and impact of potential 4D flow MRI error sources</title><title>Magnetic resonance in medicine</title><addtitle>Magn Reson Med</addtitle><description>Purpose
Uneven flow distribution in patients with Fontan circulation is suspected to lead to complications. 4D flow MRI offers evaluation using time‐resolved pathlines; however, the potential error is not well understood. The aim of this study was to systematically assess variability in flow distribution caused by well‐known sources of error.
Methods
4D flow MRI was acquired in 14 patients with Fontan circulation. Flow distribution was quantified by the % of caval venous flow pathlines reaching the left and right pulmonary arteries. Impact of data acquisition and data processing uncertainties were investigated by (1) probabilistic 4D blood flow tracking at varying noise levels, (2) down‐sampling to mimic acquisition at different spatial resolutions, (3) pathline calculation with and without eddy current correction, and (4) varied segmentation of the Fontan geometry to mimic analysis errors.
Results
Averaged among the cohort, uncertainties accounted for flow distribution errors from noise ≤3.2%, low spatial resolution ≤2.3% to 3.8%, eddy currents ≤6.4%, and inaccurate segmentation ≤3.9% to 9.1% (dilation and erosion, respectively). In a worst‐case scenario (maximum additive errors for all 4 sources), flow distribution errors were as high as 22.5%.
Conclusion
Inaccuracies related to postprocessing (segmentation, eddy currents) resulted in the largest potential error (≤15.5% combined) whereas errors related to data acquisition (noise, low spatial resolution) had a lower impact (≤5.5%‐7.0% combined). Whereas it is unlikely that these errors will be additive or affect the identification of severe asymmetry, these results illustrate the importance of eddy current correction and accurate segmentation to minimize Fontan flow distribution errors.</description><subject>4D flow MRI</subject><subject>Adolescent</subject><subject>Adult</subject><subject>Algorithms</subject><subject>Arteries</subject><subject>background phase errors</subject><subject>Blood flow</subject><subject>Blood Flow Velocity</subject><subject>Child</subject><subject>Complications</subject><subject>congenital heart disease</subject><subject>Coronary Circulation</subject><subject>Data acquisition</subject><subject>Data processing</subject><subject>Eddy currents</subject><subject>Erosion</subject><subject>Facilities management</subject><subject>Female</subject><subject>Flow distribution</subject><subject>Fontan circulation</subject><subject>Fontan Procedure</subject><subject>Heart Defects, Congenital - diagnostic imaging</subject><subject>Heart Defects, Congenital - physiopathology</subject><subject>Heart Defects, Congenital - surgery</subject><subject>Heart surgery</subject><subject>Hemodynamics</subject><subject>Humans</subject><subject>Image Interpretation, Computer-Assisted - methods</subject><subject>Image processing</subject><subject>Image Processing, Computer-Assisted - methods</subject><subject>Imaging, Three-Dimensional - methods</subject><subject>Magnetic Resonance Imaging</subject><subject>Male</subject><subject>Motion</subject><subject>Noise</subject><subject>Noise levels</subject><subject>Patients</subject><subject>probabilistic tracking</subject><subject>Pulmonary arteries</subject><subject>Pulmonary artery</subject><subject>Pulmonary Artery - diagnostic imaging</subject><subject>Pulmonary Circulation</subject><subject>Reproducibility of Results</subject><subject>Segmentation</subject><subject>Spatial data</subject><subject>Spatial discrimination</subject><subject>Spatial resolution</subject><subject>Three dimensional flow</subject><subject>Uncertainty</subject><subject>velocity noise</subject><subject>Young Adult</subject><issn>0740-3194</issn><issn>1522-2594</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2019</creationdate><recordtype>article</recordtype><recordid>eNp1kUFLHDEYhoO06Nb24B-QQC_tYTT5kkx2LoJsayu4FKQ9h2w2o5FMMiYZFw_9703drdRCT4EvDw_vy4vQESUnlBA4HdJwApILsYdmVAA0IDr-Cs2I5KRhtOMH6E3Od4SQrpN8Hx0wAlKCbGfo50I_aI9LxOPkhxh0esTsE-593OC1yyW51VRcDNgFPOribCgZb1y5xRcxFB2wcclMXj8xOqyxG0ZtCo49HmOptKt2vhMury-xTSkmnOOUjM1v0ete-2zf7d5D9OPi8_fF1-bq25fLxflVYzhnotGwsv0cOtuS1grTauAgek61MKSTGuxKWzlvjbA94cDmrQVSr5xKQ6VgPTtEZ1vvOK0GuzY1V9JejckNtbCK2qmXP8Hdqpv4oFqYd62AKviwE6R4P9lc1OCysd7rYOOUFVAqpKCSsYq-_we9q2VDrVcpwTpOgfBKfdxSJsWck-2fw1Cifo-q6qjqadTKHv-d_pn8s2IFTrfAxnn7-H-TWl4vt8pfHCOtPg</recordid><startdate>201902</startdate><enddate>201902</enddate><creator>Jarvis, Kelly</creator><creator>Schnell, Susanne</creator><creator>Barker, Alex J.</creator><creator>Rose, Michael</creator><creator>Robinson, Joshua D.</creator><creator>Rigsby, Cynthia K.</creator><creator>Markl, Michael</creator><general>Wiley Subscription Services, Inc</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>8FD</scope><scope>FR3</scope><scope>K9.</scope><scope>M7Z</scope><scope>P64</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>201902</creationdate><title>Caval to pulmonary 3D flow distribution in patients with Fontan circulation and impact of potential 4D flow MRI error sources</title><author>Jarvis, Kelly ; Schnell, Susanne ; Barker, Alex J. ; Rose, Michael ; Robinson, Joshua D. ; Rigsby, Cynthia K. ; Markl, Michael</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c4435-a2bef829e606e5c6a2425f41a5c097a2ebae786c5ef042386e20a2e417c1753f3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2019</creationdate><topic>4D flow MRI</topic><topic>Adolescent</topic><topic>Adult</topic><topic>Algorithms</topic><topic>Arteries</topic><topic>background phase errors</topic><topic>Blood flow</topic><topic>Blood Flow Velocity</topic><topic>Child</topic><topic>Complications</topic><topic>congenital heart disease</topic><topic>Coronary Circulation</topic><topic>Data acquisition</topic><topic>Data processing</topic><topic>Eddy currents</topic><topic>Erosion</topic><topic>Facilities management</topic><topic>Female</topic><topic>Flow distribution</topic><topic>Fontan circulation</topic><topic>Fontan Procedure</topic><topic>Heart Defects, Congenital - diagnostic imaging</topic><topic>Heart Defects, Congenital - physiopathology</topic><topic>Heart Defects, Congenital - surgery</topic><topic>Heart surgery</topic><topic>Hemodynamics</topic><topic>Humans</topic><topic>Image Interpretation, Computer-Assisted - methods</topic><topic>Image processing</topic><topic>Image Processing, Computer-Assisted - methods</topic><topic>Imaging, Three-Dimensional - methods</topic><topic>Magnetic Resonance Imaging</topic><topic>Male</topic><topic>Motion</topic><topic>Noise</topic><topic>Noise levels</topic><topic>Patients</topic><topic>probabilistic tracking</topic><topic>Pulmonary arteries</topic><topic>Pulmonary artery</topic><topic>Pulmonary Artery - diagnostic imaging</topic><topic>Pulmonary Circulation</topic><topic>Reproducibility of Results</topic><topic>Segmentation</topic><topic>Spatial data</topic><topic>Spatial discrimination</topic><topic>Spatial resolution</topic><topic>Three dimensional flow</topic><topic>Uncertainty</topic><topic>velocity noise</topic><topic>Young Adult</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Jarvis, Kelly</creatorcontrib><creatorcontrib>Schnell, Susanne</creatorcontrib><creatorcontrib>Barker, Alex J.</creatorcontrib><creatorcontrib>Rose, Michael</creatorcontrib><creatorcontrib>Robinson, Joshua D.</creatorcontrib><creatorcontrib>Rigsby, Cynthia K.</creatorcontrib><creatorcontrib>Markl, Michael</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Biochemistry Abstracts 1</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Magnetic resonance in medicine</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Jarvis, Kelly</au><au>Schnell, Susanne</au><au>Barker, Alex J.</au><au>Rose, Michael</au><au>Robinson, Joshua D.</au><au>Rigsby, Cynthia K.</au><au>Markl, Michael</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Caval to pulmonary 3D flow distribution in patients with Fontan circulation and impact of potential 4D flow MRI error sources</atitle><jtitle>Magnetic resonance in medicine</jtitle><addtitle>Magn Reson Med</addtitle><date>2019-02</date><risdate>2019</risdate><volume>81</volume><issue>2</issue><spage>1205</spage><epage>1218</epage><pages>1205-1218</pages><issn>0740-3194</issn><eissn>1522-2594</eissn><abstract>Purpose
Uneven flow distribution in patients with Fontan circulation is suspected to lead to complications. 4D flow MRI offers evaluation using time‐resolved pathlines; however, the potential error is not well understood. The aim of this study was to systematically assess variability in flow distribution caused by well‐known sources of error.
Methods
4D flow MRI was acquired in 14 patients with Fontan circulation. Flow distribution was quantified by the % of caval venous flow pathlines reaching the left and right pulmonary arteries. Impact of data acquisition and data processing uncertainties were investigated by (1) probabilistic 4D blood flow tracking at varying noise levels, (2) down‐sampling to mimic acquisition at different spatial resolutions, (3) pathline calculation with and without eddy current correction, and (4) varied segmentation of the Fontan geometry to mimic analysis errors.
Results
Averaged among the cohort, uncertainties accounted for flow distribution errors from noise ≤3.2%, low spatial resolution ≤2.3% to 3.8%, eddy currents ≤6.4%, and inaccurate segmentation ≤3.9% to 9.1% (dilation and erosion, respectively). In a worst‐case scenario (maximum additive errors for all 4 sources), flow distribution errors were as high as 22.5%.
Conclusion
Inaccuracies related to postprocessing (segmentation, eddy currents) resulted in the largest potential error (≤15.5% combined) whereas errors related to data acquisition (noise, low spatial resolution) had a lower impact (≤5.5%‐7.0% combined). Whereas it is unlikely that these errors will be additive or affect the identification of severe asymmetry, these results illustrate the importance of eddy current correction and accurate segmentation to minimize Fontan flow distribution errors.</abstract><cop>United States</cop><pub>Wiley Subscription Services, Inc</pub><pmid>30277276</pmid><doi>10.1002/mrm.27455</doi><tpages>0</tpages><oa>free_for_read</oa></addata></record> |
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subjects | 4D flow MRI Adolescent Adult Algorithms Arteries background phase errors Blood flow Blood Flow Velocity Child Complications congenital heart disease Coronary Circulation Data acquisition Data processing Eddy currents Erosion Facilities management Female Flow distribution Fontan circulation Fontan Procedure Heart Defects, Congenital - diagnostic imaging Heart Defects, Congenital - physiopathology Heart Defects, Congenital - surgery Heart surgery Hemodynamics Humans Image Interpretation, Computer-Assisted - methods Image processing Image Processing, Computer-Assisted - methods Imaging, Three-Dimensional - methods Magnetic Resonance Imaging Male Motion Noise Noise levels Patients probabilistic tracking Pulmonary arteries Pulmonary artery Pulmonary Artery - diagnostic imaging Pulmonary Circulation Reproducibility of Results Segmentation Spatial data Spatial discrimination Spatial resolution Three dimensional flow Uncertainty velocity noise Young Adult |
title | Caval to pulmonary 3D flow distribution in patients with Fontan circulation and impact of potential 4D flow MRI error sources |
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