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Regulating the Regulators: The Control of Transcription Factors in Plant Defense Signaling
Being sessile, plants rely on intricate signaling pathways to mount an efficient defense against external threats while maintaining the cost balance for growth. Transcription factors (TFs) form a repertoire of master regulators in controlling various processes of plant development and responses agai...
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Published in: | International journal of molecular sciences 2018-11, Vol.19 (12), p.3737 |
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description | Being sessile, plants rely on intricate signaling pathways to mount an efficient defense against external threats while maintaining the cost balance for growth. Transcription factors (TFs) form a repertoire of master regulators in controlling various processes of plant development and responses against external stimuli. There are about 58 families of TFs in plants and among them, six major TF families (AP2/ERF (APETALA2/ethylene responsive factor), bHLH (basic helix-loop-helix), MYB (myeloblastosis related), NAC (no apical meristem (NAM),
transcription activation factor (ATAF1/2), and cup-shaped cotyledon (CUC2)), WRKY, and bZIP (basic leucine zipper)) are found to be involved in biotic and abiotic stress responses. As master regulators of plant defense, the expression and activities of these TFs are subjected to various transcriptional and post-transcriptional controls, as well as post-translational modifications. Many excellent reviews have discussed the importance of these TFs families in mediating their downstream target signaling pathways in plant defense. In this review, we summarize the molecular regulatory mechanisms determining the expression and activities of these master regulators themselves, providing insights for studying their variation and regulation in crop wild relatives (CWR). With the advance of genome sequencing and the growing collection of re-sequencing data of CWR, now is the time to re-examine and discover CWR for the lost or alternative alleles of TFs. Such approach will facilitate molecular breeding and genetic improvement of domesticated crops, especially in stress tolerance and defense responses, with the aim to address the growing concern of climate change and its impact on agriculture crop production. |
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transcription activation factor (ATAF1/2), and cup-shaped cotyledon (CUC2)), WRKY, and bZIP (basic leucine zipper)) are found to be involved in biotic and abiotic stress responses. As master regulators of plant defense, the expression and activities of these TFs are subjected to various transcriptional and post-transcriptional controls, as well as post-translational modifications. Many excellent reviews have discussed the importance of these TFs families in mediating their downstream target signaling pathways in plant defense. In this review, we summarize the molecular regulatory mechanisms determining the expression and activities of these master regulators themselves, providing insights for studying their variation and regulation in crop wild relatives (CWR). With the advance of genome sequencing and the growing collection of re-sequencing data of CWR, now is the time to re-examine and discover CWR for the lost or alternative alleles of TFs. 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Transcription factors (TFs) form a repertoire of master regulators in controlling various processes of plant development and responses against external stimuli. There are about 58 families of TFs in plants and among them, six major TF families (AP2/ERF (APETALA2/ethylene responsive factor), bHLH (basic helix-loop-helix), MYB (myeloblastosis related), NAC (no apical meristem (NAM),
transcription activation factor (ATAF1/2), and cup-shaped cotyledon (CUC2)), WRKY, and bZIP (basic leucine zipper)) are found to be involved in biotic and abiotic stress responses. As master regulators of plant defense, the expression and activities of these TFs are subjected to various transcriptional and post-transcriptional controls, as well as post-translational modifications. Many excellent reviews have discussed the importance of these TFs families in mediating their downstream target signaling pathways in plant defense. In this review, we summarize the molecular regulatory mechanisms determining the expression and activities of these master regulators themselves, providing insights for studying their variation and regulation in crop wild relatives (CWR). With the advance of genome sequencing and the growing collection of re-sequencing data of CWR, now is the time to re-examine and discover CWR for the lost or alternative alleles of TFs. Such approach will facilitate molecular breeding and genetic improvement of domesticated crops, especially in stress tolerance and defense responses, with the aim to address the growing concern of climate change and its impact on agriculture crop production.</description><subject>Abiotic stress</subject><subject>Arabidopsis - genetics</subject><subject>Arabidopsis - growth & development</subject><subject>Arabidopsis - immunology</subject><subject>Biosynthesis</subject><subject>Crop production</subject><subject>Defense mechanisms</subject><subject>External stimuli</subject><subject>Gene expression</subject><subject>Gene Expression Regulation, Developmental</subject><subject>Gene Expression Regulation, Plant</subject><subject>Genomes</subject><subject>Glycine max - genetics</subject><subject>Glycine max - growth & development</subject><subject>Glycine max - immunology</subject><subject>Kinases</subject><subject>Leucine zipper proteins</subject><subject>Meristems</subject><subject>Metabolites</subject><subject>Oryza - 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growth & development</subject><subject>Triticum - immunology</subject><subject>Wild type</subject><subject>Zea mays - genetics</subject><subject>Zea mays - growth & development</subject><subject>Zea mays - immunology</subject><issn>1422-0067</issn><issn>1661-6596</issn><issn>1422-0067</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2018</creationdate><recordtype>article</recordtype><sourceid>PIMPY</sourceid><recordid>eNpVkUFLAzEQhYMoWqs3zxLwajWTyW66HgSpVgVB0XrxEpJttk3ZJjXZFfz3rlilnmaG-XjzZoaQI2BniAU7d4tlggI4SpRbpAeC8wFjudzeyPfIfkoLxjjyrNgle8iElBygR96e7aytdeP8jDZzS9dliOmCTrp6FHwTQ01DRSdR-1RGt2pc8HSsy2-KOk-fau0bem0r65OlL27mdd3pHZCdStfJHq5jn7yObyaju8HD4-396OphUAo5bAZCVGLKpbEmqzhkIHGaS6i45hmfalMgGmGMKfMCLRQC0DABwwyRC2S2Etgnlz-6q9Ys7bS0nWNdq1V0Sx0_VdBO_e94N1ez8KFy5MA6_T45WQvE8N7a1KhFaGO3RFI8G_JhBpBDR53-UGUMKUVb_U0Apr4_oTY_0eHHm67-4N_T4xcf64T6</recordid><startdate>20181124</startdate><enddate>20181124</enddate><creator>Ng, Danny W-K</creator><creator>Abeysinghe, Jayami K</creator><creator>Kamali, Maedeh</creator><general>MDPI AG</general><general>MDPI</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>8G5</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BENPR</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>GUQSH</scope><scope>K9.</scope><scope>M0S</scope><scope>M1P</scope><scope>M2O</scope><scope>MBDVC</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>Q9U</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0002-5764-6035</orcidid></search><sort><creationdate>20181124</creationdate><title>Regulating the Regulators: The Control of Transcription Factors in Plant Defense Signaling</title><author>Ng, Danny W-K ; Abeysinghe, Jayami K ; Kamali, Maedeh</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c478t-44f4d27beb5f215173d671f2a252dab933b4bbbc693e19413b04185332430ef43</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2018</creationdate><topic>Abiotic stress</topic><topic>Arabidopsis - genetics</topic><topic>Arabidopsis - growth & development</topic><topic>Arabidopsis - immunology</topic><topic>Biosynthesis</topic><topic>Crop production</topic><topic>Defense mechanisms</topic><topic>External stimuli</topic><topic>Gene expression</topic><topic>Gene Expression Regulation, Developmental</topic><topic>Gene Expression Regulation, Plant</topic><topic>Genomes</topic><topic>Glycine max - genetics</topic><topic>Glycine max - growth & development</topic><topic>Glycine max - immunology</topic><topic>Kinases</topic><topic>Leucine zipper proteins</topic><topic>Meristems</topic><topic>Metabolites</topic><topic>Oryza - genetics</topic><topic>Oryza - growth & development</topic><topic>Oryza - immunology</topic><topic>Pathogens</topic><topic>Plant breeding</topic><topic>Plant Immunity - genetics</topic><topic>Plant Proteins - classification</topic><topic>Plant Proteins - genetics</topic><topic>Plant Proteins - immunology</topic><topic>Post-transcription</topic><topic>Post-translation</topic><topic>Proteins</topic><topic>Regulators</topic><topic>Review</topic><topic>Reviews</topic><topic>Signal Transduction</topic><topic>Stress, Physiological - genetics</topic><topic>Stress, Physiological - immunology</topic><topic>Transcription activation</topic><topic>Transcription factors</topic><topic>Transcription Factors - classification</topic><topic>Transcription Factors - genetics</topic><topic>Transcription Factors - immunology</topic><topic>Transcription, Genetic</topic><topic>Triticum - genetics</topic><topic>Triticum - growth & development</topic><topic>Triticum - immunology</topic><topic>Wild type</topic><topic>Zea mays - genetics</topic><topic>Zea mays - growth & development</topic><topic>Zea mays - immunology</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Ng, Danny W-K</creatorcontrib><creatorcontrib>Abeysinghe, Jayami K</creatorcontrib><creatorcontrib>Kamali, Maedeh</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>Research Library (Alumni Edition)</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest Central</collection><collection>ProQuest Central Essentials</collection><collection>AUTh Library subscriptions: ProQuest Central</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>Research Library Prep</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Research Library</collection><collection>Research Library (Corporate)</collection><collection>Publicly Available Content Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>ProQuest Central Basic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>International journal of molecular sciences</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Ng, Danny W-K</au><au>Abeysinghe, Jayami K</au><au>Kamali, Maedeh</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Regulating the Regulators: The Control of Transcription Factors in Plant Defense Signaling</atitle><jtitle>International journal of molecular sciences</jtitle><addtitle>Int J Mol Sci</addtitle><date>2018-11-24</date><risdate>2018</risdate><volume>19</volume><issue>12</issue><spage>3737</spage><pages>3737-</pages><issn>1422-0067</issn><issn>1661-6596</issn><eissn>1422-0067</eissn><abstract>Being sessile, plants rely on intricate signaling pathways to mount an efficient defense against external threats while maintaining the cost balance for growth. 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transcription activation factor (ATAF1/2), and cup-shaped cotyledon (CUC2)), WRKY, and bZIP (basic leucine zipper)) are found to be involved in biotic and abiotic stress responses. As master regulators of plant defense, the expression and activities of these TFs are subjected to various transcriptional and post-transcriptional controls, as well as post-translational modifications. Many excellent reviews have discussed the importance of these TFs families in mediating their downstream target signaling pathways in plant defense. In this review, we summarize the molecular regulatory mechanisms determining the expression and activities of these master regulators themselves, providing insights for studying their variation and regulation in crop wild relatives (CWR). With the advance of genome sequencing and the growing collection of re-sequencing data of CWR, now is the time to re-examine and discover CWR for the lost or alternative alleles of TFs. Such approach will facilitate molecular breeding and genetic improvement of domesticated crops, especially in stress tolerance and defense responses, with the aim to address the growing concern of climate change and its impact on agriculture crop production.</abstract><cop>Switzerland</cop><pub>MDPI AG</pub><pmid>30477211</pmid><doi>10.3390/ijms19123737</doi><orcidid>https://orcid.org/0000-0002-5764-6035</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Abiotic stress Arabidopsis - genetics Arabidopsis - growth & development Arabidopsis - immunology Biosynthesis Crop production Defense mechanisms External stimuli Gene expression Gene Expression Regulation, Developmental Gene Expression Regulation, Plant Genomes Glycine max - genetics Glycine max - growth & development Glycine max - immunology Kinases Leucine zipper proteins Meristems Metabolites Oryza - genetics Oryza - growth & development Oryza - immunology Pathogens Plant breeding Plant Immunity - genetics Plant Proteins - classification Plant Proteins - genetics Plant Proteins - immunology Post-transcription Post-translation Proteins Regulators Review Reviews Signal Transduction Stress, Physiological - genetics Stress, Physiological - immunology Transcription activation Transcription factors Transcription Factors - classification Transcription Factors - genetics Transcription Factors - immunology Transcription, Genetic Triticum - genetics Triticum - growth & development Triticum - immunology Wild type Zea mays - genetics Zea mays - growth & development Zea mays - immunology |
title | Regulating the Regulators: The Control of Transcription Factors in Plant Defense Signaling |
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