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Low frequency Raman Spectroscopy for micron-scale and in vivo characterization of elemental sulfur in microbial samples
Elemental sulfur (S(0)) is an important intermediate of the sulfur cycle and is generated by chemical and biological sulfide oxidation. Raman spectromicroscopy can be applied to environmental samples for the detection of S(0), as a practical non-destructive micron-scale method for use on wet materia...
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Published in: | Scientific reports 2019-05, Vol.9 (1), p.7971-7971, Article 7971 |
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description | Elemental sulfur (S(0)) is an important intermediate of the sulfur cycle and is generated by chemical and biological sulfide oxidation. Raman spectromicroscopy can be applied to environmental samples for the detection of S(0), as a practical non-destructive micron-scale method for use on wet material and living cells. Technical advances in filter materials enable the acquisition of ultra-low frequency (ULF) Raman measurements in the 10–100 cm
−1
range using a single-stage spectrometer. Here we demonstrate the potency of ULF Raman spectromicroscopy to harness the external vibrational modes of previously unrecognized S(0) structures present in environmental samples. We investigate the chemical and structural nature of intracellular S(0) granules stored within environmental mats of sulfur-oxidizing γ-Proteobacteria (
Thiothrix)
.
In vivo
intracellular ULF scans indicate the presence of amorphous cyclooctasulfur (S
8
), clarifying enduring uncertainties regarding the content of microbial sulfur storage globules. Raman scattering of extracellular sulfur clusters in
Thiothrix
mats furthermore reveals an unexpected abundance of metastable β-S
8
and γ-S
8
, in addition to the stable α-S
8
allotrope. We propose ULF Raman spectroscopy as a powerful method for the micron-scale determination of S(0) structure in natural and laboratory systems, with a promising potential to shine new light on environmental microbial and chemical sulfur cycling mechanisms. |
doi_str_mv | 10.1038/s41598-019-44353-6 |
format | article |
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−1
range using a single-stage spectrometer. Here we demonstrate the potency of ULF Raman spectromicroscopy to harness the external vibrational modes of previously unrecognized S(0) structures present in environmental samples. We investigate the chemical and structural nature of intracellular S(0) granules stored within environmental mats of sulfur-oxidizing γ-Proteobacteria (
Thiothrix)
.
In vivo
intracellular ULF scans indicate the presence of amorphous cyclooctasulfur (S
8
), clarifying enduring uncertainties regarding the content of microbial sulfur storage globules. Raman scattering of extracellular sulfur clusters in
Thiothrix
mats furthermore reveals an unexpected abundance of metastable β-S
8
and γ-S
8
, in addition to the stable α-S
8
allotrope. We propose ULF Raman spectroscopy as a powerful method for the micron-scale determination of S(0) structure in natural and laboratory systems, with a promising potential to shine new light on environmental microbial and chemical sulfur cycling mechanisms.</description><identifier>ISSN: 2045-2322</identifier><identifier>EISSN: 2045-2322</identifier><identifier>DOI: 10.1038/s41598-019-44353-6</identifier><identifier>PMID: 31138888</identifier><language>eng</language><publisher>London: Nature Publishing Group UK</publisher><subject>14/28 ; 14/63 ; 140/133 ; 631/45/47/4112 ; 639/301/930/12 ; 704/47/4112 ; Humanities and Social Sciences ; Intracellular ; multidisciplinary ; Oxidation ; Oxidation-Reduction ; Raman spectroscopy ; Science ; Science (multidisciplinary) ; Spectroscopy ; Spectrum analysis ; Spectrum Analysis, Raman - methods ; Sulfides ; Sulfur ; Sulfur - analysis ; Sulfur - metabolism ; Sulfur cycle ; Thiothrix ; Thiothrix - chemistry ; Thiothrix - metabolism</subject><ispartof>Scientific reports, 2019-05, Vol.9 (1), p.7971-7971, Article 7971</ispartof><rights>The Author(s) 2019</rights><rights>The Author(s) 2019. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c577t-5adaa2272fa68f03be4e56571d5f4f144dcf12faa57561866a229db6d49c0fe93</citedby><cites>FETCH-LOGICAL-c577t-5adaa2272fa68f03be4e56571d5f4f144dcf12faa57561866a229db6d49c0fe93</cites><orcidid>0000-0001-5214-0601</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.proquest.com/docview/2231418314/fulltextPDF?pq-origsite=primo$$EPDF$$P50$$Gproquest$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.proquest.com/docview/2231418314?pq-origsite=primo$$EHTML$$P50$$Gproquest$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,885,25753,27924,27925,37012,37013,44590,53791,53793,75126</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/31138888$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Nims, Christine</creatorcontrib><creatorcontrib>Cron, Brandi</creatorcontrib><creatorcontrib>Wetherington, Maxwell</creatorcontrib><creatorcontrib>Macalady, Jennifer</creatorcontrib><creatorcontrib>Cosmidis, Julie</creatorcontrib><title>Low frequency Raman Spectroscopy for micron-scale and in vivo characterization of elemental sulfur in microbial samples</title><title>Scientific reports</title><addtitle>Sci Rep</addtitle><addtitle>Sci Rep</addtitle><description>Elemental sulfur (S(0)) is an important intermediate of the sulfur cycle and is generated by chemical and biological sulfide oxidation. Raman spectromicroscopy can be applied to environmental samples for the detection of S(0), as a practical non-destructive micron-scale method for use on wet material and living cells. Technical advances in filter materials enable the acquisition of ultra-low frequency (ULF) Raman measurements in the 10–100 cm
−1
range using a single-stage spectrometer. Here we demonstrate the potency of ULF Raman spectromicroscopy to harness the external vibrational modes of previously unrecognized S(0) structures present in environmental samples. We investigate the chemical and structural nature of intracellular S(0) granules stored within environmental mats of sulfur-oxidizing γ-Proteobacteria (
Thiothrix)
.
In vivo
intracellular ULF scans indicate the presence of amorphous cyclooctasulfur (S
8
), clarifying enduring uncertainties regarding the content of microbial sulfur storage globules. Raman scattering of extracellular sulfur clusters in
Thiothrix
mats furthermore reveals an unexpected abundance of metastable β-S
8
and γ-S
8
, in addition to the stable α-S
8
allotrope. We propose ULF Raman spectroscopy as a powerful method for the micron-scale determination of S(0) structure in natural and laboratory systems, with a promising potential to shine new light on environmental microbial and chemical sulfur cycling mechanisms.</description><subject>14/28</subject><subject>14/63</subject><subject>140/133</subject><subject>631/45/47/4112</subject><subject>639/301/930/12</subject><subject>704/47/4112</subject><subject>Humanities and Social Sciences</subject><subject>Intracellular</subject><subject>multidisciplinary</subject><subject>Oxidation</subject><subject>Oxidation-Reduction</subject><subject>Raman spectroscopy</subject><subject>Science</subject><subject>Science (multidisciplinary)</subject><subject>Spectroscopy</subject><subject>Spectrum analysis</subject><subject>Spectrum Analysis, Raman - methods</subject><subject>Sulfides</subject><subject>Sulfur</subject><subject>Sulfur - analysis</subject><subject>Sulfur - metabolism</subject><subject>Sulfur cycle</subject><subject>Thiothrix</subject><subject>Thiothrix - chemistry</subject><subject>Thiothrix - metabolism</subject><issn>2045-2322</issn><issn>2045-2322</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2019</creationdate><recordtype>article</recordtype><sourceid>PIMPY</sourceid><recordid>eNp9kU1v1DAQhi1ERau2f4ADssSFSyD-jHNBQlX5kFZCKnC2Zh27deXYwU62Wn493t1SSg_MwbY8j1_PzIvQS9K-JS1T7wonoldNS_qGcyZYI5-hE9py0VBG6fNH52N0XsptW0PQnpP-BTpmhDBV4wTdrdIddtn-XGw0W3wFI0T8bbJmzqmYNG2xSxmP3uQUm2IgWAxxwD7ijd8kbG4gg5lt9r9g9ini5LANdrRxhoDLEtySd_BeYO13dzBOwZYzdOQgFHt-v5-iHx8vv198blZfP325-LBqjOi6uREwAFDaUQdSuZatLbdCio4MwnFHOB-MIzUJohOSKCkr3A9rOfDetM727BS9P-hOy3q0g6mFZQh6yn6EvNUJvP43E_2Nvk4bLQVTHZNV4M29QE51SGXWoy_GhgDRpqVoShlRvBdUVfT1E_Q2LTnW9vYUJ6oulaIHqk6klGzdQzGk1Ttr9cFaXa3Ve2v1ropXj9t4ePLHyAqwA1BqKl7b_Pfv_8j-BnGkseY</recordid><startdate>20190528</startdate><enddate>20190528</enddate><creator>Nims, Christine</creator><creator>Cron, Brandi</creator><creator>Wetherington, Maxwell</creator><creator>Macalady, Jennifer</creator><creator>Cosmidis, Julie</creator><general>Nature Publishing Group UK</general><general>Nature Publishing Group</general><scope>C6C</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>88I</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M2P</scope><scope>M7P</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>Q9U</scope><scope>7X8</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0001-5214-0601</orcidid></search><sort><creationdate>20190528</creationdate><title>Low frequency Raman Spectroscopy for micron-scale and in vivo characterization of elemental sulfur in microbial samples</title><author>Nims, Christine ; Cron, Brandi ; Wetherington, Maxwell ; Macalady, Jennifer ; Cosmidis, Julie</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c577t-5adaa2272fa68f03be4e56571d5f4f144dcf12faa57561866a229db6d49c0fe93</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2019</creationdate><topic>14/28</topic><topic>14/63</topic><topic>140/133</topic><topic>631/45/47/4112</topic><topic>639/301/930/12</topic><topic>704/47/4112</topic><topic>Humanities and Social Sciences</topic><topic>Intracellular</topic><topic>multidisciplinary</topic><topic>Oxidation</topic><topic>Oxidation-Reduction</topic><topic>Raman spectroscopy</topic><topic>Science</topic><topic>Science (multidisciplinary)</topic><topic>Spectroscopy</topic><topic>Spectrum analysis</topic><topic>Spectrum Analysis, Raman - methods</topic><topic>Sulfides</topic><topic>Sulfur</topic><topic>Sulfur - analysis</topic><topic>Sulfur - metabolism</topic><topic>Sulfur cycle</topic><topic>Thiothrix</topic><topic>Thiothrix - chemistry</topic><topic>Thiothrix - metabolism</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Nims, Christine</creatorcontrib><creatorcontrib>Cron, Brandi</creatorcontrib><creatorcontrib>Wetherington, Maxwell</creatorcontrib><creatorcontrib>Macalady, Jennifer</creatorcontrib><creatorcontrib>Cosmidis, Julie</creatorcontrib><collection>SpringerOpen(OpenAccess)</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>ProQuest Health and Medical</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Science Database (Alumni Edition)</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest Central</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>ProQuest Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>ProQuest Science Journals</collection><collection>ProQuest Biological Science Journals</collection><collection>Publicly Available Content Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central Basic</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Scientific reports</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Nims, Christine</au><au>Cron, Brandi</au><au>Wetherington, Maxwell</au><au>Macalady, Jennifer</au><au>Cosmidis, Julie</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Low frequency Raman Spectroscopy for micron-scale and in vivo characterization of elemental sulfur in microbial samples</atitle><jtitle>Scientific reports</jtitle><stitle>Sci Rep</stitle><addtitle>Sci Rep</addtitle><date>2019-05-28</date><risdate>2019</risdate><volume>9</volume><issue>1</issue><spage>7971</spage><epage>7971</epage><pages>7971-7971</pages><artnum>7971</artnum><issn>2045-2322</issn><eissn>2045-2322</eissn><abstract>Elemental sulfur (S(0)) is an important intermediate of the sulfur cycle and is generated by chemical and biological sulfide oxidation. Raman spectromicroscopy can be applied to environmental samples for the detection of S(0), as a practical non-destructive micron-scale method for use on wet material and living cells. Technical advances in filter materials enable the acquisition of ultra-low frequency (ULF) Raman measurements in the 10–100 cm
−1
range using a single-stage spectrometer. Here we demonstrate the potency of ULF Raman spectromicroscopy to harness the external vibrational modes of previously unrecognized S(0) structures present in environmental samples. We investigate the chemical and structural nature of intracellular S(0) granules stored within environmental mats of sulfur-oxidizing γ-Proteobacteria (
Thiothrix)
.
In vivo
intracellular ULF scans indicate the presence of amorphous cyclooctasulfur (S
8
), clarifying enduring uncertainties regarding the content of microbial sulfur storage globules. Raman scattering of extracellular sulfur clusters in
Thiothrix
mats furthermore reveals an unexpected abundance of metastable β-S
8
and γ-S
8
, in addition to the stable α-S
8
allotrope. We propose ULF Raman spectroscopy as a powerful method for the micron-scale determination of S(0) structure in natural and laboratory systems, with a promising potential to shine new light on environmental microbial and chemical sulfur cycling mechanisms.</abstract><cop>London</cop><pub>Nature Publishing Group UK</pub><pmid>31138888</pmid><doi>10.1038/s41598-019-44353-6</doi><tpages>1</tpages><orcidid>https://orcid.org/0000-0001-5214-0601</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | 14/28 14/63 140/133 631/45/47/4112 639/301/930/12 704/47/4112 Humanities and Social Sciences Intracellular multidisciplinary Oxidation Oxidation-Reduction Raman spectroscopy Science Science (multidisciplinary) Spectroscopy Spectrum analysis Spectrum Analysis, Raman - methods Sulfides Sulfur Sulfur - analysis Sulfur - metabolism Sulfur cycle Thiothrix Thiothrix - chemistry Thiothrix - metabolism |
title | Low frequency Raman Spectroscopy for micron-scale and in vivo characterization of elemental sulfur in microbial samples |
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