Molecular Characterization of Auxin Efflux Carrier- ABCB1 in hexaploid wheat

• Published in: Scientific reports 2019-11, Vol.9 (1), p.17327-14, Article 17327
• Main Authors: Mohan, Amita, Dhaliwal, Amandeep K., Nagarajan, Ragupathi, Gill, Kulvinder S.
• Format: Article
• Language: English
• Subjects: 13/106; 13/109; 38/23; 38/39; 38/44; 38/71; 38/77; 38/89; 38/90; 42/41; 45/22; 45/23; 631/337; 631/449/1659; Abscisic acid; Amino acid sequence; Amino acids; ATP Binding Cassette Transporter, Subfamily B, Member 1 - genetics; ATP Binding Cassette Transporter, Subfamily B, Member 1 - metabolism; Barley; Biosynthesis; Cell differentiation; Chromosome Mapping; Chromosomes; Chromosomes, Plant - genetics; Circadian rhythms; Cloning; Cloning, Molecular; Gene Expression Regulation, Plant - drug effects; Genes; Gibberellic acid; Humanities and Social Sciences; Jasmonic acid; Meristem - metabolism; Meristems; multidisciplinary; Mutation; Physiology; Plant hormones; Plant Proteins - genetics; Plant Proteins - metabolism; Plant tissues; Polyploidy; Promoter Regions, Genetic; RNA-mediated interference; Science; Science (multidisciplinary); Soil sciences; Sorghum; Tissue Distribution; Triticum - genetics; Triticum - growth & development; Triticum - metabolism; Triticum aestivum; Wheat
• ISSN: 2045-2322; 2045-2322
• DOI: 10.1038/s41598-019-51482-5

Auxin is an important phytohormone that regulates response, differentiation, and development of plant cell, tissue, and organs. Along with its local production, long-distance transport coordinated by the efflux/influx membrane transporters is instrumental in plant development and architecture. In the present study, we cloned and characterized a wheat ( Triticum aestivum ) auxin efflux carrier ABCB1. The TaABCB1 was physically localized to the proximal 15% of the short arm of wheat homoeologous group 7 chromosomes. Size of the Chinese spring (CS) homoeologs genomic copies ranged from 5.3–6.2 kb with the 7A copy being the largest due to novel insertions in its third intron. The three homoeologous copies share 95–97% sequence similarity at the nucleotide, 98–99% amino acid, and overall Q-score of 0.98 at 3-D structure level. Though detected in all analyzed tissues, TaABCB1 predominantly expressed in the meristematic tissues likely due to the presence of meristem-specific activation regulatory element identified in the promoter region. RNAi plants of TaABCB1 gene resulted in reduced plant height and increased seed width. Promoter analysis revealed several responsive elements detected in the promoter region including that for different hormones as auxin, gibberellic acid, jasmonic acid and abscisic acid, light, and circadian regulated elements.