Characteristics and Functions of the Rumen Microbial Community of Cattle-Yak at Different Ages

• Published in: BioMed research international 2020, Vol.2020 (2020), p.1-9
• Main Authors: Liu, Xiu, Luo, Yu-Zhu, Li, Shaobin, Wang, Jiqing, Dingkao, Renqing, Shi, Bingang, Hu, Jiang, Sha, Yuzhu, Zhang, Wei
• Format: Article
• Language: English
• Subjects: Adaptability; Adaptation; Age; Age Factors; Analysis; Animals; Annotations; Bacteria; Bacteria - classification; Bacteria - genetics; Beef cattle; Biodegradation; Bos grunniens; Bos taurus; Carbohydrates; Cattle; China; Community composition; Composition; Deoxyribonucleic acid; DNA; Enzymes; Firmicutes; Genes; Genome, Bacterial; Genomes; Glycosidases; Glycoside hydrolase; Heterosis; Laboratory animals; Lignin - metabolism; Lignocellulose; Livestock; Male; Metagenome; Metagenomics; Microbiomes; Microbiota; Microbiota (Symbiotic organisms); Microbiota - genetics; Microbiota - physiology; Microflora; Microorganisms; Rumen; Rumen - microbiology; Rumen microorganisms; Software; Species composition; Taxonomy
• ISSN: 2314-6133; 2314-6141
• DOI: 10.1155/2020/3482692

A cattle-yak, which is a hybrid between a yak (Bos grunniens) and cattle (Bos taurus), is an important livestock animal, but basic questions regarding its physiology and environmental adaptation remain unanswered. To address this issue, the present study examined the species composition and functional characteristics of rumen microorganisms in the cattle-yak of different ages (2 and 3 years old) by metagenomic analysis. We found that rumen microbial community composition was similar at the two ages. Firmicutes, Fibrobacteres, Euryarchaeota, Bacteroidetes, and Proteobacteria were the predominant phyla, with Firmicutes accounting for the highest percentage of bacteria in 2-year-old (48%) and 3-year-old (46%) animals. Bacterial species involved in lignocellulose degradation were detected in the rumen of adult cattle-yaks including Ruminococcus flavefaciens, Ruminococcus albus, Fibrobacter succinogenes, and Prevotella ruminicola, with F. succinogenes being the most abundant. A total of 145,489 genes were annotated according to the Carbohydrate-active Enzyme database, which identified glycoside hydrolases as the most highly represented enzyme family. Further functional annotation revealed specific microflora and genes in the adult rumen that are potentially related to plateau adaptability. These results could explain the heterosis of the cattle-yak and provide insight into mechanisms of physiologic adaptation in plateau animals.