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Detection and characterization of bovine-like coronaviruses from four species of zoo ruminants
Five coronaviruses (CoVs) were detected in diarrheal feces from four zoo ruminant species: one wisent ( Bison bonasus), two Himalayan tahr ( Hemitragus jemlahicus), one sitatunga ( Tragelaphus spekii), and one nyala ( Tragelaphus angasii). We sequenced and analyzed the spike (S) and hemagglutinin/es...
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| Published in: | Veterinary microbiology 2011-03, Vol.148 (2), p.396-401 |
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| container_end_page | 401 |
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| container_start_page | 396 |
| container_title | Veterinary microbiology |
| container_volume | 148 |
| creator | Chung, Joon-Yee Kim, Hye-Ryoung Bae, You-Chan Lee, O-Soo Oem, Jae-Ku |
| description | Five coronaviruses (CoVs) were detected in diarrheal feces from four zoo ruminant species: one wisent (
Bison bonasus), two Himalayan tahr (
Hemitragus jemlahicus), one sitatunga (
Tragelaphus spekii), and one nyala (
Tragelaphus angasii). We sequenced and analyzed the spike (S) and hemagglutinin/esterase (HE) genes of these viruses and compared the nucleotide (nt) and deduced amino acid (aa) sequences with those of other bovine CoV (BcoV) strains. Comparison of the entire deduced aa sequences of the S and HE glycoproteins revealed no specific differences that would account for discrimination between bovine-like CoV strains from zoo ruminants and BcoVs strains. In addition, the 99.9% aa identity among the five CoV strains revealed that the ruminants were infected by the same strain. Phylogenetically, bovine-like CoVs belong to group 2a CoVs, which are related most closely to the BcoV strains recently isolated in Korea. These data suggest that cattle are potential reservoirs for CoVs that are capable of infecting zoo ruminants. |
| doi_str_mv | 10.1016/j.vetmic.2010.08.035 |
| format | article |
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Bison bonasus), two Himalayan tahr (
Hemitragus jemlahicus), one sitatunga (
Tragelaphus spekii), and one nyala (
Tragelaphus angasii). We sequenced and analyzed the spike (S) and hemagglutinin/esterase (HE) genes of these viruses and compared the nucleotide (nt) and deduced amino acid (aa) sequences with those of other bovine CoV (BcoV) strains. Comparison of the entire deduced aa sequences of the S and HE glycoproteins revealed no specific differences that would account for discrimination between bovine-like CoV strains from zoo ruminants and BcoVs strains. In addition, the 99.9% aa identity among the five CoV strains revealed that the ruminants were infected by the same strain. Phylogenetically, bovine-like CoVs belong to group 2a CoVs, which are related most closely to the BcoV strains recently isolated in Korea. These data suggest that cattle are potential reservoirs for CoVs that are capable of infecting zoo ruminants.</description><identifier>ISSN: 0378-1135</identifier><identifier>EISSN: 1873-2542</identifier><identifier>DOI: 10.1016/j.vetmic.2010.08.035</identifier><identifier>PMID: 20880639</identifier><identifier>CODEN: VMICDQ</identifier><language>eng</language><publisher>Amsterdam: Elsevier B.V</publisher><subject>Animals ; Animals, Zoo - virology ; Biological and medical sciences ; Bovine coronavirus ; Bovine-like coronavirus ; Cattle ; Coronavirus - classification ; Coronavirus - genetics ; Coronavirus - isolation & purification ; Coronavirus Infections - veterinary ; Coronavirus Infections - virology ; Diarrhea - veterinary ; Diarrhea - virology ; Dysentery - veterinary ; Dysentery - virology ; Feces - virology ; Fundamental and applied biological sciences. Psychology ; Hemagglutinin/esterase (HE) gene ; Hemagglutinins, Viral - genetics ; Membrane Glycoproteins - genetics ; Microbiology ; Miscellaneous ; Phylogenetic analysis ; Phylogeny ; Republic of Korea ; RNA, Viral - genetics ; Ruminants - virology ; Sequence Analysis, Protein ; Sequence Analysis, RNA ; Spike (S) gene ; Spike Glycoprotein, Coronavirus ; Viral Envelope Proteins - genetics ; Viral Fusion Proteins - genetics ; Virology</subject><ispartof>Veterinary microbiology, 2011-03, Vol.148 (2), p.396-401</ispartof><rights>2010 Elsevier B.V.</rights><rights>2015 INIST-CNRS</rights><rights>Copyright © 2010 Elsevier B.V. All rights reserved.</rights><rights>Copyright © 2010 Elsevier B.V. Published by Elsevier B.V. All rights reserved. 2010 Elsevier B.V.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c516t-fc01c2259142ae10025008a0fa34000c1d20870fe39e2d4e799fc577ade25ac73</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>230,314,776,780,881,27901,27902</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=23911038$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/20880639$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Chung, Joon-Yee</creatorcontrib><creatorcontrib>Kim, Hye-Ryoung</creatorcontrib><creatorcontrib>Bae, You-Chan</creatorcontrib><creatorcontrib>Lee, O-Soo</creatorcontrib><creatorcontrib>Oem, Jae-Ku</creatorcontrib><title>Detection and characterization of bovine-like coronaviruses from four species of zoo ruminants</title><title>Veterinary microbiology</title><addtitle>Vet Microbiol</addtitle><description>Five coronaviruses (CoVs) were detected in diarrheal feces from four zoo ruminant species: one wisent (
Bison bonasus), two Himalayan tahr (
Hemitragus jemlahicus), one sitatunga (
Tragelaphus spekii), and one nyala (
Tragelaphus angasii). We sequenced and analyzed the spike (S) and hemagglutinin/esterase (HE) genes of these viruses and compared the nucleotide (nt) and deduced amino acid (aa) sequences with those of other bovine CoV (BcoV) strains. Comparison of the entire deduced aa sequences of the S and HE glycoproteins revealed no specific differences that would account for discrimination between bovine-like CoV strains from zoo ruminants and BcoVs strains. In addition, the 99.9% aa identity among the five CoV strains revealed that the ruminants were infected by the same strain. Phylogenetically, bovine-like CoVs belong to group 2a CoVs, which are related most closely to the BcoV strains recently isolated in Korea. These data suggest that cattle are potential reservoirs for CoVs that are capable of infecting zoo ruminants.</description><subject>Animals</subject><subject>Animals, Zoo - virology</subject><subject>Biological and medical sciences</subject><subject>Bovine coronavirus</subject><subject>Bovine-like coronavirus</subject><subject>Cattle</subject><subject>Coronavirus - classification</subject><subject>Coronavirus - genetics</subject><subject>Coronavirus - isolation & purification</subject><subject>Coronavirus Infections - veterinary</subject><subject>Coronavirus Infections - virology</subject><subject>Diarrhea - veterinary</subject><subject>Diarrhea - virology</subject><subject>Dysentery - veterinary</subject><subject>Dysentery - virology</subject><subject>Feces - virology</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Hemagglutinin/esterase (HE) gene</subject><subject>Hemagglutinins, Viral - genetics</subject><subject>Membrane Glycoproteins - genetics</subject><subject>Microbiology</subject><subject>Miscellaneous</subject><subject>Phylogenetic analysis</subject><subject>Phylogeny</subject><subject>Republic of Korea</subject><subject>RNA, Viral - genetics</subject><subject>Ruminants - virology</subject><subject>Sequence Analysis, Protein</subject><subject>Sequence Analysis, RNA</subject><subject>Spike (S) gene</subject><subject>Spike Glycoprotein, Coronavirus</subject><subject>Viral Envelope Proteins - genetics</subject><subject>Viral Fusion Proteins - genetics</subject><subject>Virology</subject><issn>0378-1135</issn><issn>1873-2542</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2011</creationdate><recordtype>article</recordtype><recordid>eNp9kU1v1DAQhi1ERZfCP0CQC-opy9jOh3NBQqXQSpU4QK9YU2fceknsxU4i0V-Pyy4tvXCyNH5m5tU8jL3isObAm3eb9ULT6MxaQC6BWoOsn7AVV60sRV2Jp2wFslUl57I-ZM9T2gBA1TXwjB0KUAoa2a3Y9480kZlc8AX6vjA3GNFMFN0t_ikGW1yFxXkqB_eDChNi8Li4OCdKhY1hLGyYY5G2ZFyuZPw2hCLOo_Pop_SCHVgcEr3cv0fs8tPpt5Oz8uLL5_OTDxelqXkzldYAN0LUHa8EEgcQNYBCsCirnNrwPiduwZLsSPQVtV1nTd222JOo0bTyiL3fzd3OVyP1hvwUcdDb6EaMv3RApx__eHejr8OiW87bvDgPON4PiOHnTGnSo0uGhgE9hTlpVcuMNarJZLUjTQwpRbL3WzjoOzN6o3dm9J0ZDUpnM7nt9b8J75v-qsjA2z2AyeBgI3rj0gMnO85Bqsy92XEWg8brmJnLr3mTBN5V-YLq4RiUL744ijplOd5Q72J2rfvg_p_1Nxawub4</recordid><startdate>20110324</startdate><enddate>20110324</enddate><creator>Chung, Joon-Yee</creator><creator>Kim, Hye-Ryoung</creator><creator>Bae, You-Chan</creator><creator>Lee, O-Soo</creator><creator>Oem, Jae-Ku</creator><general>Elsevier B.V</general><general>Amsterdam; New York: Elsevier</general><general>Elsevier</general><general>Elsevier B.V. Published by Elsevier B.V</general><scope>FBQ</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20110324</creationdate><title>Detection and characterization of bovine-like coronaviruses from four species of zoo ruminants</title><author>Chung, Joon-Yee ; Kim, Hye-Ryoung ; Bae, You-Chan ; Lee, O-Soo ; Oem, Jae-Ku</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c516t-fc01c2259142ae10025008a0fa34000c1d20870fe39e2d4e799fc577ade25ac73</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2011</creationdate><topic>Animals</topic><topic>Animals, Zoo - virology</topic><topic>Biological and medical sciences</topic><topic>Bovine coronavirus</topic><topic>Bovine-like coronavirus</topic><topic>Cattle</topic><topic>Coronavirus - classification</topic><topic>Coronavirus - genetics</topic><topic>Coronavirus - isolation & purification</topic><topic>Coronavirus Infections - veterinary</topic><topic>Coronavirus Infections - virology</topic><topic>Diarrhea - veterinary</topic><topic>Diarrhea - virology</topic><topic>Dysentery - veterinary</topic><topic>Dysentery - virology</topic><topic>Feces - virology</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Hemagglutinin/esterase (HE) gene</topic><topic>Hemagglutinins, Viral - genetics</topic><topic>Membrane Glycoproteins - genetics</topic><topic>Microbiology</topic><topic>Miscellaneous</topic><topic>Phylogenetic analysis</topic><topic>Phylogeny</topic><topic>Republic of Korea</topic><topic>RNA, Viral - genetics</topic><topic>Ruminants - virology</topic><topic>Sequence Analysis, Protein</topic><topic>Sequence Analysis, RNA</topic><topic>Spike (S) gene</topic><topic>Spike Glycoprotein, Coronavirus</topic><topic>Viral Envelope Proteins - genetics</topic><topic>Viral Fusion Proteins - genetics</topic><topic>Virology</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Chung, Joon-Yee</creatorcontrib><creatorcontrib>Kim, Hye-Ryoung</creatorcontrib><creatorcontrib>Bae, You-Chan</creatorcontrib><creatorcontrib>Lee, O-Soo</creatorcontrib><creatorcontrib>Oem, Jae-Ku</creatorcontrib><collection>AGRIS</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Veterinary microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Chung, Joon-Yee</au><au>Kim, Hye-Ryoung</au><au>Bae, You-Chan</au><au>Lee, O-Soo</au><au>Oem, Jae-Ku</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Detection and characterization of bovine-like coronaviruses from four species of zoo ruminants</atitle><jtitle>Veterinary microbiology</jtitle><addtitle>Vet Microbiol</addtitle><date>2011-03-24</date><risdate>2011</risdate><volume>148</volume><issue>2</issue><spage>396</spage><epage>401</epage><pages>396-401</pages><issn>0378-1135</issn><eissn>1873-2542</eissn><coden>VMICDQ</coden><abstract>Five coronaviruses (CoVs) were detected in diarrheal feces from four zoo ruminant species: one wisent (
Bison bonasus), two Himalayan tahr (
Hemitragus jemlahicus), one sitatunga (
Tragelaphus spekii), and one nyala (
Tragelaphus angasii). We sequenced and analyzed the spike (S) and hemagglutinin/esterase (HE) genes of these viruses and compared the nucleotide (nt) and deduced amino acid (aa) sequences with those of other bovine CoV (BcoV) strains. Comparison of the entire deduced aa sequences of the S and HE glycoproteins revealed no specific differences that would account for discrimination between bovine-like CoV strains from zoo ruminants and BcoVs strains. In addition, the 99.9% aa identity among the five CoV strains revealed that the ruminants were infected by the same strain. Phylogenetically, bovine-like CoVs belong to group 2a CoVs, which are related most closely to the BcoV strains recently isolated in Korea. These data suggest that cattle are potential reservoirs for CoVs that are capable of infecting zoo ruminants.</abstract><cop>Amsterdam</cop><pub>Elsevier B.V</pub><pmid>20880639</pmid><doi>10.1016/j.vetmic.2010.08.035</doi><tpages>6</tpages><oa>free_for_read</oa></addata></record> |
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| identifier | ISSN: 0378-1135 |
| ispartof | Veterinary microbiology, 2011-03, Vol.148 (2), p.396-401 |
| issn | 0378-1135 1873-2542 |
| language | eng |
| recordid | cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_7117225 |
| source | ScienceDirect Journals |
| subjects | Animals Animals, Zoo - virology Biological and medical sciences Bovine coronavirus Bovine-like coronavirus Cattle Coronavirus - classification Coronavirus - genetics Coronavirus - isolation & purification Coronavirus Infections - veterinary Coronavirus Infections - virology Diarrhea - veterinary Diarrhea - virology Dysentery - veterinary Dysentery - virology Feces - virology Fundamental and applied biological sciences. Psychology Hemagglutinin/esterase (HE) gene Hemagglutinins, Viral - genetics Membrane Glycoproteins - genetics Microbiology Miscellaneous Phylogenetic analysis Phylogeny Republic of Korea RNA, Viral - genetics Ruminants - virology Sequence Analysis, Protein Sequence Analysis, RNA Spike (S) gene Spike Glycoprotein, Coronavirus Viral Envelope Proteins - genetics Viral Fusion Proteins - genetics Virology |
| title | Detection and characterization of bovine-like coronaviruses from four species of zoo ruminants |
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