Detection and Occurrence of Indicator Organisms and Pathogens

A review of the literature published in 2009 is presented on topics related to occurrence and detection of fecal indicators and pathogens. This review is divided into three major sections: environmental occurrence, persistence, and transport; detection methods; and microbial source tracking. The fir...

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Published in:Water environment research 2010, Vol.82 (10), p.883-907
Main Authors: Herzog, Amanda B., Bhaduri, Prianca, Stedtfeld, Robert D., Seyrig, Gregoire, Ahmad, Farhan, Dave, Parth K., Hashsham, Syed A.
Format: Article
Language:English
Subjects:
Bacteria
DETECTION
ENVIRONMENTAL
FECAL INDICATOR BACTERIA
Feces
GENOTYPIC
Manures
Microbiology
PCR
PERSISTENCE
PHENOTYPIC
Water pollution
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container_end_page 907
container_issue 10
container_start_page 883
container_title Water environment research
container_volume 82
creator Herzog, Amanda B.
Bhaduri, Prianca
Stedtfeld, Robert D.
Seyrig, Gregoire
Ahmad, Farhan
Dave, Parth K.
Hashsham, Syed A.
description A review of the literature published in 2009 is presented on topics related to occurrence and detection of fecal indicators and pathogens. This review is divided into three major sections: environmental occurrence, persistence, and transport; detection methods; and microbial source tracking. The first section is subdivided into persistence and transport of fecal indicator bacteria, particle association and transport, microbial quality of recreational beaches, occurrence of fecal indicators bacteria and pathogens in watersheds, irrigation systems, estuaries, and wetlands, and novel indicators. The second section describes the studies related to endpoint PCR and reverse transcription PCR, real-time PCR, loop mediated isothermal amplification, array based genetic and phenotype based diagnostics, and genotyping. The third section covers genotypic and phenotypic microbial source tracking methods.
doi_str_mv 10.2175/106143010X12756668800654
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source Wiley; JSTOR Archival Journals and Primary Sources Collection
subjects Bacteria
DETECTION
ENVIRONMENTAL
FECAL INDICATOR BACTERIA
Feces
GENOTYPIC
Manures
Microbiology
PCR
PERSISTENCE
PHENOTYPIC
Water pollution
title Detection and Occurrence of Indicator Organisms and Pathogens
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