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Transcriptomic Analysis of Streptococcus suis in Response to Ferrous Iron and Cobalt Toxicity
is a zoonotic pathogen causing serious infections in swine and humans. Although metals are essential for life, excess amounts of metals are toxic to bacteria. Transcriptome-level data of the mechanisms for resistance to metal toxicity in are available for no metals other than zinc. Herein, we explor...
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Published in: | Genes 2020-09, Vol.11 (9), p.1035 |
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description | is a zoonotic pathogen causing serious infections in swine and humans. Although metals are essential for life, excess amounts of metals are toxic to bacteria. Transcriptome-level data of the mechanisms for resistance to metal toxicity in
are available for no metals other than zinc. Herein, we explored the transcriptome-level changes in
in response to ferrous iron and cobalt toxicity by RNA sequencing. Many genes were differentially expressed in the presence of excess ferrous iron and cobalt. Most genes in response to cobalt toxicity showed the same expression trends as those in response to ferrous iron toxicity. qRT-PCR analysis of the selected genes confirmed the accuracy of RNA sequencing results. Bioinformatic analysis of the differentially expressed genes indicated that ferrous iron and cobalt have similar effects on the cellular processes of
. Ferrous iron treatment resulted in down-regulation of several oxidative stress tolerance-related genes and up-regulation of the genes in an amino acid ABC transporter operon. Expression of several genes in the arginine deiminase system was down-regulated after ferrous iron and cobalt treatment. Collectively, our results suggested that
alters the expression of multiple genes to respond to ferrous iron and cobalt toxicity. |
doi_str_mv | 10.3390/genes11091035 |
format | article |
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are available for no metals other than zinc. Herein, we explored the transcriptome-level changes in
in response to ferrous iron and cobalt toxicity by RNA sequencing. Many genes were differentially expressed in the presence of excess ferrous iron and cobalt. Most genes in response to cobalt toxicity showed the same expression trends as those in response to ferrous iron toxicity. qRT-PCR analysis of the selected genes confirmed the accuracy of RNA sequencing results. Bioinformatic analysis of the differentially expressed genes indicated that ferrous iron and cobalt have similar effects on the cellular processes of
. Ferrous iron treatment resulted in down-regulation of several oxidative stress tolerance-related genes and up-regulation of the genes in an amino acid ABC transporter operon. Expression of several genes in the arginine deiminase system was down-regulated after ferrous iron and cobalt treatment. Collectively, our results suggested that
alters the expression of multiple genes to respond to ferrous iron and cobalt toxicity.</description><identifier>ISSN: 2073-4425</identifier><identifier>EISSN: 2073-4425</identifier><identifier>DOI: 10.3390/genes11091035</identifier><identifier>PMID: 32887434</identifier><language>eng</language><publisher>Switzerland: MDPI AG</publisher><subject>ABC transporter ; Amino acids ; Animals ; Arginine ; Arginine deiminase ; ATP-Binding Cassette Transporters - genetics ; Bacteria ; Bacterial infections ; Bacterial Proteins - genetics ; Cobalt ; Cobalt - toxicity ; Down-Regulation - genetics ; Epidemics ; Gene expression ; Gene Expression Profiling - methods ; Gene Expression Regulation, Bacterial - genetics ; Gene regulation ; Genetic aspects ; Genomes ; Heavy metals ; Hogs ; Homeostasis ; Hydrolases - genetics ; Infections ; Iron ; Iron - toxicity ; Meningitis ; Metals ; Operon - genetics ; Oxidative stress ; Oxidative Stress - genetics ; Physiological aspects ; Ribonucleic acid ; RNA ; Streptococcus ; Streptococcus suis ; Streptococcus suis - genetics ; Swine ; Toxicity ; Transcriptome - genetics ; Virulence ; Zinc</subject><ispartof>Genes, 2020-09, Vol.11 (9), p.1035</ispartof><rights>COPYRIGHT 2020 MDPI AG</rights><rights>2020. This work is licensed under http://creativecommons.org/licenses/by/3.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>2020 by the authors. 2020</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c3585-481364a8a363384a6e126e791730540dafbe9f4ea618e969249958bacaf039593</citedby><cites>FETCH-LOGICAL-c3585-481364a8a363384a6e126e791730540dafbe9f4ea618e969249958bacaf039593</cites><orcidid>0000-0003-3030-4251</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.proquest.com/docview/2440496454/fulltextPDF?pq-origsite=primo$$EPDF$$P50$$Gproquest$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.proquest.com/docview/2440496454?pq-origsite=primo$$EHTML$$P50$$Gproquest$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,885,25753,27924,27925,37012,44590,53791,53793,75126</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/32887434$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Jia, Mengdie</creatorcontrib><creatorcontrib>Wei, Man</creatorcontrib><creatorcontrib>Zhang, Yunzeng</creatorcontrib><creatorcontrib>Zheng, Chengkun</creatorcontrib><title>Transcriptomic Analysis of Streptococcus suis in Response to Ferrous Iron and Cobalt Toxicity</title><title>Genes</title><addtitle>Genes (Basel)</addtitle><description>is a zoonotic pathogen causing serious infections in swine and humans. Although metals are essential for life, excess amounts of metals are toxic to bacteria. Transcriptome-level data of the mechanisms for resistance to metal toxicity in
are available for no metals other than zinc. Herein, we explored the transcriptome-level changes in
in response to ferrous iron and cobalt toxicity by RNA sequencing. Many genes were differentially expressed in the presence of excess ferrous iron and cobalt. Most genes in response to cobalt toxicity showed the same expression trends as those in response to ferrous iron toxicity. qRT-PCR analysis of the selected genes confirmed the accuracy of RNA sequencing results. Bioinformatic analysis of the differentially expressed genes indicated that ferrous iron and cobalt have similar effects on the cellular processes of
. Ferrous iron treatment resulted in down-regulation of several oxidative stress tolerance-related genes and up-regulation of the genes in an amino acid ABC transporter operon. Expression of several genes in the arginine deiminase system was down-regulated after ferrous iron and cobalt treatment. Collectively, our results suggested that
alters the expression of multiple genes to respond to ferrous iron and cobalt toxicity.</description><subject>ABC transporter</subject><subject>Amino acids</subject><subject>Animals</subject><subject>Arginine</subject><subject>Arginine deiminase</subject><subject>ATP-Binding Cassette Transporters - genetics</subject><subject>Bacteria</subject><subject>Bacterial infections</subject><subject>Bacterial Proteins - genetics</subject><subject>Cobalt</subject><subject>Cobalt - toxicity</subject><subject>Down-Regulation - genetics</subject><subject>Epidemics</subject><subject>Gene expression</subject><subject>Gene Expression Profiling - methods</subject><subject>Gene Expression Regulation, Bacterial - genetics</subject><subject>Gene regulation</subject><subject>Genetic aspects</subject><subject>Genomes</subject><subject>Heavy metals</subject><subject>Hogs</subject><subject>Homeostasis</subject><subject>Hydrolases - genetics</subject><subject>Infections</subject><subject>Iron</subject><subject>Iron - toxicity</subject><subject>Meningitis</subject><subject>Metals</subject><subject>Operon - genetics</subject><subject>Oxidative stress</subject><subject>Oxidative Stress - genetics</subject><subject>Physiological aspects</subject><subject>Ribonucleic acid</subject><subject>RNA</subject><subject>Streptococcus</subject><subject>Streptococcus suis</subject><subject>Streptococcus suis - genetics</subject><subject>Swine</subject><subject>Toxicity</subject><subject>Transcriptome - genetics</subject><subject>Virulence</subject><subject>Zinc</subject><issn>2073-4425</issn><issn>2073-4425</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2020</creationdate><recordtype>article</recordtype><sourceid>PIMPY</sourceid><recordid>eNpVUU1rGzEQFSWhCU6OvRZBzptKq5FWuhSMSdpAINA6xyBkedZVWEuOtBvqf1-FpPmYw8ww83i8mUfIF87OhTDs2wYjFs6Z4UzIT-S4ZZ1oAFp58K4_Iqel3LMawFrG5GdyJFqtOxBwTO6W2cXic9iNaRs8nUc37EsoNPX095ixjn3yfiq0THUaIv2FZZdiQTomeok5p7q7yilSF9d0kVZuGOky_Q0-jPsTcti7oeDpS52R28uL5eJnc33z42oxv268kFo2oLlQ4LQTSggNTiFvFXaGd4JJYGvXr9D0gE5xjUaZFoyReuW865kw0ogZ-f7Mu5tWW1x7jGN2g93lsHV5b5ML9uMmhj92kx5tJ5XotKgEZy8EOT1MWEZ7n6Zcf1FsC8DAKJDwhtq4AW2IfapkfhuKt3MF9QZmap6R5hnlcyolY_-qgzP7ZJv9YFvFf30v_hX93yTxD345kw4</recordid><startdate>20200902</startdate><enddate>20200902</enddate><creator>Jia, Mengdie</creator><creator>Wei, Man</creator><creator>Zhang, Yunzeng</creator><creator>Zheng, Chengkun</creator><general>MDPI AG</general><general>MDPI</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>LK8</scope><scope>M7P</scope><scope>P64</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>RC3</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0003-3030-4251</orcidid></search><sort><creationdate>20200902</creationdate><title>Transcriptomic Analysis of Streptococcus suis in Response to Ferrous Iron and Cobalt Toxicity</title><author>Jia, Mengdie ; Wei, Man ; Zhang, Yunzeng ; Zheng, Chengkun</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c3585-481364a8a363384a6e126e791730540dafbe9f4ea618e969249958bacaf039593</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2020</creationdate><topic>ABC transporter</topic><topic>Amino acids</topic><topic>Animals</topic><topic>Arginine</topic><topic>Arginine deiminase</topic><topic>ATP-Binding Cassette Transporters - genetics</topic><topic>Bacteria</topic><topic>Bacterial infections</topic><topic>Bacterial Proteins - genetics</topic><topic>Cobalt</topic><topic>Cobalt - toxicity</topic><topic>Down-Regulation - genetics</topic><topic>Epidemics</topic><topic>Gene expression</topic><topic>Gene Expression Profiling - methods</topic><topic>Gene Expression Regulation, Bacterial - genetics</topic><topic>Gene regulation</topic><topic>Genetic aspects</topic><topic>Genomes</topic><topic>Heavy metals</topic><topic>Hogs</topic><topic>Homeostasis</topic><topic>Hydrolases - genetics</topic><topic>Infections</topic><topic>Iron</topic><topic>Iron - toxicity</topic><topic>Meningitis</topic><topic>Metals</topic><topic>Operon - genetics</topic><topic>Oxidative stress</topic><topic>Oxidative Stress - genetics</topic><topic>Physiological aspects</topic><topic>Ribonucleic acid</topic><topic>RNA</topic><topic>Streptococcus</topic><topic>Streptococcus suis</topic><topic>Streptococcus suis - genetics</topic><topic>Swine</topic><topic>Toxicity</topic><topic>Transcriptome - genetics</topic><topic>Virulence</topic><topic>Zinc</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Jia, Mengdie</creatorcontrib><creatorcontrib>Wei, Man</creatorcontrib><creatorcontrib>Zhang, Yunzeng</creatorcontrib><creatorcontrib>Zheng, Chengkun</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest Central</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>ProQuest Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Biological Science Collection</collection><collection>ProQuest Biological Science Journals</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Publicly Available Content (ProQuest)</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>Genetics Abstracts</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Genes</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Jia, Mengdie</au><au>Wei, Man</au><au>Zhang, Yunzeng</au><au>Zheng, Chengkun</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Transcriptomic Analysis of Streptococcus suis in Response to Ferrous Iron and Cobalt Toxicity</atitle><jtitle>Genes</jtitle><addtitle>Genes (Basel)</addtitle><date>2020-09-02</date><risdate>2020</risdate><volume>11</volume><issue>9</issue><spage>1035</spage><pages>1035-</pages><issn>2073-4425</issn><eissn>2073-4425</eissn><abstract>is a zoonotic pathogen causing serious infections in swine and humans. Although metals are essential for life, excess amounts of metals are toxic to bacteria. Transcriptome-level data of the mechanisms for resistance to metal toxicity in
are available for no metals other than zinc. Herein, we explored the transcriptome-level changes in
in response to ferrous iron and cobalt toxicity by RNA sequencing. Many genes were differentially expressed in the presence of excess ferrous iron and cobalt. Most genes in response to cobalt toxicity showed the same expression trends as those in response to ferrous iron toxicity. qRT-PCR analysis of the selected genes confirmed the accuracy of RNA sequencing results. Bioinformatic analysis of the differentially expressed genes indicated that ferrous iron and cobalt have similar effects on the cellular processes of
. Ferrous iron treatment resulted in down-regulation of several oxidative stress tolerance-related genes and up-regulation of the genes in an amino acid ABC transporter operon. Expression of several genes in the arginine deiminase system was down-regulated after ferrous iron and cobalt treatment. Collectively, our results suggested that
alters the expression of multiple genes to respond to ferrous iron and cobalt toxicity.</abstract><cop>Switzerland</cop><pub>MDPI AG</pub><pmid>32887434</pmid><doi>10.3390/genes11091035</doi><orcidid>https://orcid.org/0000-0003-3030-4251</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | ABC transporter Amino acids Animals Arginine Arginine deiminase ATP-Binding Cassette Transporters - genetics Bacteria Bacterial infections Bacterial Proteins - genetics Cobalt Cobalt - toxicity Down-Regulation - genetics Epidemics Gene expression Gene Expression Profiling - methods Gene Expression Regulation, Bacterial - genetics Gene regulation Genetic aspects Genomes Heavy metals Hogs Homeostasis Hydrolases - genetics Infections Iron Iron - toxicity Meningitis Metals Operon - genetics Oxidative stress Oxidative Stress - genetics Physiological aspects Ribonucleic acid RNA Streptococcus Streptococcus suis Streptococcus suis - genetics Swine Toxicity Transcriptome - genetics Virulence Zinc |
title | Transcriptomic Analysis of Streptococcus suis in Response to Ferrous Iron and Cobalt Toxicity |
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