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Clinical Nocardia species: Identification, clinical characteristics, and antimicrobial susceptibility in Shandong, China
Nocardia is a pathogen responsible for a variety of clinical infections. Here, we aimed to investigate the species distribution, clinical manifestations, and antimicrobial susceptibility of Nocardia species in two tertiary general hospitals over 3 years in China. In this retrospective study, a total...
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Published in: | Biomolecules & biomedicine 2020-11, Vol.20 (4), p.531-538 |
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description | Nocardia is a pathogen responsible for a variety of clinical infections. Here, we aimed to investigate the species distribution, clinical manifestations, and antimicrobial susceptibility of Nocardia species in two tertiary general hospitals over 3 years in China. In this retrospective study, a total of 27 Nocardia species were isolated from 27 individuals between January 2017 and December 2019. Nocardia isolates were identified to species level by mass spectrometry and 16S rRNA PCR sequencing. Clinical data were collected from medical records. Antimicrobial susceptibility was determined by standard Broth microdilution method. The 27 patients with Nocardia infection included 12 males and 15 females with a mean age of 60.11 years. Among 27 Nocardia isolates, 7 species were identified, with the most common species being N. otitidiscaviarum (40.7%). The antimicrobial susceptibility profiles varied between different Nocardia species. Notably, all Nocardia isolates were linezolid susceptible. Majority of Nocardia isolates were collected from a department of respiratory medicine (55.56%) and sputum specimen (44.44%). Pulmonary region was the most involved body site (70.37%), followed by skin (7.4%) and pleural cavity (7.4%). Most patients with Nocardia infection needed combination antibiotic therapy. Two deaths were reported during the treatment period and 24 patients achieved improvement after antibiotic therapy. The clinical manifestations of Nocardia infection and antimicrobial susceptibility profiles varied with diverse Nocardia species. Thus, the accurate identification of these species is crucial for the diagnosis and the selection of antibiotic treatment. |
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Here, we aimed to investigate the species distribution, clinical manifestations, and antimicrobial susceptibility of Nocardia species in two tertiary general hospitals over 3 years in China. In this retrospective study, a total of 27 Nocardia species were isolated from 27 individuals between January 2017 and December 2019. Nocardia isolates were identified to species level by mass spectrometry and 16S rRNA PCR sequencing. Clinical data were collected from medical records. Antimicrobial susceptibility was determined by standard Broth microdilution method. The 27 patients with Nocardia infection included 12 males and 15 females with a mean age of 60.11 years. Among 27 Nocardia isolates, 7 species were identified, with the most common species being N. otitidiscaviarum (40.7%). The antimicrobial susceptibility profiles varied between different Nocardia species. Notably, all Nocardia isolates were linezolid susceptible. Majority of Nocardia isolates were collected from a department of respiratory medicine (55.56%) and sputum specimen (44.44%). Pulmonary region was the most involved body site (70.37%), followed by skin (7.4%) and pleural cavity (7.4%). Most patients with Nocardia infection needed combination antibiotic therapy. Two deaths were reported during the treatment period and 24 patients achieved improvement after antibiotic therapy. The clinical manifestations of Nocardia infection and antimicrobial susceptibility profiles varied with diverse Nocardia species. Thus, the accurate identification of these species is crucial for the diagnosis and the selection of antibiotic treatment.</description><identifier>ISSN: 1512-8601</identifier><identifier>ISSN: 2831-0896</identifier><identifier>EISSN: 1840-4812</identifier><identifier>EISSN: 2831-090X</identifier><identifier>DOI: 10.17305/bjbms.2020.4764</identifier><identifier>PMID: 32415818</identifier><language>eng</language><publisher>Bosnia and Herzegovina: Association of Basic Medical Sciences</publisher><subject>antimicrobial susceptibility ; Distribution ; Drug resistance in microorganisms ; Health aspects ; identification ; Identification and classification ; mass spectrometry ; Medical research ; Medicine, Experimental ; Nocardia ; Nocardia infection ; nocardiosis</subject><ispartof>Biomolecules & biomedicine, 2020-11, Vol.20 (4), p.531-538</ispartof><rights>COPYRIGHT 2020 Association of Basic Medical Sciences</rights><rights>Copyright: © The Author(s) (2020) 2020</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c487t-c82960153c8c00a8561aa9c337330ed74f73e08d7e262205606a13b29d946e013</citedby><orcidid>0000-0003-3099-2461 ; 0000-0002-0195-8152 ; 0000-0002-7234-3809</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC7664795/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC7664795/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,724,777,781,882,27905,27906,53772,53774</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/32415818$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Lu, Shu-Hua</creatorcontrib><creatorcontrib>Qian, Zhen-Wen</creatorcontrib><creatorcontrib>Mou, Pei-Pei</creatorcontrib><creatorcontrib>Xie, Lian</creatorcontrib><title>Clinical Nocardia species: Identification, clinical characteristics, and antimicrobial susceptibility in Shandong, China</title><title>Biomolecules & biomedicine</title><addtitle>Bosn J Basic Med Sci</addtitle><description>Nocardia is a pathogen responsible for a variety of clinical infections. Here, we aimed to investigate the species distribution, clinical manifestations, and antimicrobial susceptibility of Nocardia species in two tertiary general hospitals over 3 years in China. In this retrospective study, a total of 27 Nocardia species were isolated from 27 individuals between January 2017 and December 2019. Nocardia isolates were identified to species level by mass spectrometry and 16S rRNA PCR sequencing. Clinical data were collected from medical records. Antimicrobial susceptibility was determined by standard Broth microdilution method. The 27 patients with Nocardia infection included 12 males and 15 females with a mean age of 60.11 years. Among 27 Nocardia isolates, 7 species were identified, with the most common species being N. otitidiscaviarum (40.7%). The antimicrobial susceptibility profiles varied between different Nocardia species. Notably, all Nocardia isolates were linezolid susceptible. Majority of Nocardia isolates were collected from a department of respiratory medicine (55.56%) and sputum specimen (44.44%). Pulmonary region was the most involved body site (70.37%), followed by skin (7.4%) and pleural cavity (7.4%). Most patients with Nocardia infection needed combination antibiotic therapy. Two deaths were reported during the treatment period and 24 patients achieved improvement after antibiotic therapy. The clinical manifestations of Nocardia infection and antimicrobial susceptibility profiles varied with diverse Nocardia species. Thus, the accurate identification of these species is crucial for the diagnosis and the selection of antibiotic treatment.</description><subject>antimicrobial susceptibility</subject><subject>Distribution</subject><subject>Drug resistance in microorganisms</subject><subject>Health aspects</subject><subject>identification</subject><subject>Identification and classification</subject><subject>mass spectrometry</subject><subject>Medical research</subject><subject>Medicine, Experimental</subject><subject>Nocardia</subject><subject>Nocardia infection</subject><subject>nocardiosis</subject><issn>1512-8601</issn><issn>2831-0896</issn><issn>1840-4812</issn><issn>2831-090X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2020</creationdate><recordtype>article</recordtype><sourceid>DOA</sourceid><recordid>eNptUk1vEzEQXSEQLYU7J7QSFw7ZMP5Y28uhUhXxEamCA3C2vLY3cbSxg71B9N8zSdqKSGhk2Zp572lm_KrqNYE5kQza9_2m35Y5BQpzLgV_Ul0SxaHhitCn-G4JbZQAclG9KGUDIDqm-PPqglFOWkXUZfVnMYYYrBnrr8ma7IKpy87b4MuHeul8nMKA1SmkOKvtA9SuTTZ28jmUKdgyq010eKawDTanPiCk7Iv1uyn0YQzTXR1i_X2NqBRXs3qxDtG8rJ4NZiz-1f19Vf389PHH4ktz--3zcnFz21iu5NRYRTscoGVWWQCjWkGM6SxjkjHwTvJBMg_KSU8FpdAKEIawnnau48IDYVfV8qTrktnoXQ5bk-90MkEfEymvtMk4xei14NxbkL1vleMMRO-HAfq-kwRg8NSh1vVJa7fvt95ZXE8245noeSWGtV6l31oKwWXXosC7e4Gcfu19mfQ24J7G0USf9kVTDhiSdx1C356gK4OthTgkVLQHuL4RqNcCoQpR8_-gMJzHv0jRDwHzZwQ4EfCjSsl-eOyegD56Sh89pQ-e0gdPIeXNv1M_Eh5MxP4CLIPItQ</recordid><startdate>20201101</startdate><enddate>20201101</enddate><creator>Lu, Shu-Hua</creator><creator>Qian, Zhen-Wen</creator><creator>Mou, Pei-Pei</creator><creator>Xie, Lian</creator><general>Association of Basic Medical Sciences</general><general>Association of Basic Medical Sciences of Federation of Bosnia and Herzegovina</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope><orcidid>https://orcid.org/0000-0003-3099-2461</orcidid><orcidid>https://orcid.org/0000-0002-0195-8152</orcidid><orcidid>https://orcid.org/0000-0002-7234-3809</orcidid></search><sort><creationdate>20201101</creationdate><title>Clinical Nocardia species: Identification, clinical characteristics, and antimicrobial susceptibility in Shandong, China</title><author>Lu, Shu-Hua ; Qian, Zhen-Wen ; Mou, Pei-Pei ; Xie, Lian</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c487t-c82960153c8c00a8561aa9c337330ed74f73e08d7e262205606a13b29d946e013</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2020</creationdate><topic>antimicrobial susceptibility</topic><topic>Distribution</topic><topic>Drug resistance in microorganisms</topic><topic>Health aspects</topic><topic>identification</topic><topic>Identification and classification</topic><topic>mass spectrometry</topic><topic>Medical research</topic><topic>Medicine, Experimental</topic><topic>Nocardia</topic><topic>Nocardia infection</topic><topic>nocardiosis</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Lu, Shu-Hua</creatorcontrib><creatorcontrib>Qian, Zhen-Wen</creatorcontrib><creatorcontrib>Mou, Pei-Pei</creatorcontrib><creatorcontrib>Xie, Lian</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>Biomolecules & biomedicine</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Lu, Shu-Hua</au><au>Qian, Zhen-Wen</au><au>Mou, Pei-Pei</au><au>Xie, Lian</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Clinical Nocardia species: Identification, clinical characteristics, and antimicrobial susceptibility in Shandong, China</atitle><jtitle>Biomolecules & biomedicine</jtitle><addtitle>Bosn J Basic Med Sci</addtitle><date>2020-11-01</date><risdate>2020</risdate><volume>20</volume><issue>4</issue><spage>531</spage><epage>538</epage><pages>531-538</pages><issn>1512-8601</issn><issn>2831-0896</issn><eissn>1840-4812</eissn><eissn>2831-090X</eissn><abstract>Nocardia is a pathogen responsible for a variety of clinical infections. Here, we aimed to investigate the species distribution, clinical manifestations, and antimicrobial susceptibility of Nocardia species in two tertiary general hospitals over 3 years in China. In this retrospective study, a total of 27 Nocardia species were isolated from 27 individuals between January 2017 and December 2019. Nocardia isolates were identified to species level by mass spectrometry and 16S rRNA PCR sequencing. Clinical data were collected from medical records. Antimicrobial susceptibility was determined by standard Broth microdilution method. The 27 patients with Nocardia infection included 12 males and 15 females with a mean age of 60.11 years. Among 27 Nocardia isolates, 7 species were identified, with the most common species being N. otitidiscaviarum (40.7%). The antimicrobial susceptibility profiles varied between different Nocardia species. Notably, all Nocardia isolates were linezolid susceptible. Majority of Nocardia isolates were collected from a department of respiratory medicine (55.56%) and sputum specimen (44.44%). Pulmonary region was the most involved body site (70.37%), followed by skin (7.4%) and pleural cavity (7.4%). Most patients with Nocardia infection needed combination antibiotic therapy. Two deaths were reported during the treatment period and 24 patients achieved improvement after antibiotic therapy. The clinical manifestations of Nocardia infection and antimicrobial susceptibility profiles varied with diverse Nocardia species. 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subjects | antimicrobial susceptibility Distribution Drug resistance in microorganisms Health aspects identification Identification and classification mass spectrometry Medical research Medicine, Experimental Nocardia Nocardia infection nocardiosis |
title | Clinical Nocardia species: Identification, clinical characteristics, and antimicrobial susceptibility in Shandong, China |
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