Loading…
An immune cell infiltration-based immune score model predicts prognosis and chemotherapy effects in breast cancer
Immune cells have essential auxiliary functions and influence clinical outcomes in cancer, with high immune infiltration being associated with improved clinical outcomes and better response to treatment in breast cancer (BC). However, studies to date have not fully considered the tumor-infiltrating...
Saved in:
Published in: | Theranostics 2020-01, Vol.10 (26), p.11938-11949 |
---|---|
Main Authors: | , , , , , , , , , , , , , , , |
Format: | Article |
Language: | English |
Subjects: | |
Citations: | Items that cite this one |
Online Access: | Get full text |
Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
cited_by | cdi_FETCH-LOGICAL-c406t-4b815961bc9f93d3320803c53da1658ddd37abc240dcb3c791af8bc8ecb5a7973 |
---|---|
cites | |
container_end_page | 11949 |
container_issue | 26 |
container_start_page | 11938 |
container_title | Theranostics |
container_volume | 10 |
creator | Sui, Silei An, Xin Xu, Caiming Li, Zongjuan Hua, Yijun Huang, Geya Sui, Sibei Long, Qian Sui, Yanxia Xiong, Yuqing Ntim, Micheal Guo, Wei Chen, Miao Deng, Wuguo Xiao, Xiangsheng Li, Man |
description | Immune cells have essential auxiliary functions and influence clinical outcomes in cancer, with high immune infiltration being associated with improved clinical outcomes and better response to treatment in breast cancer (BC). However, studies to date have not fully considered the tumor-infiltrating immune cell (TIIC) landscape in tumors. This study investigated potential biomarkers based on TIICs to improve prognosis and treatment effect in BC.
We enrolled 5112 patients for analysis and used cell type identification by estimating relative subsets of RNA transcripts (CIBERSORT), a new computational algorithm, to quantify 22 TIICs in primary BC. From the results of univariate Cox regression, 12 immune cells were determined to be significantly related to the overall survival (OS) of BC patients. Furthermore, least absolute shrinkage and selection operator (LASSO) and multivariate Cox regression analyses were applied to construct an immune prognostic model based on six potential biomarkers. By dividing patients into low- and high-risk groups, a significant distinction in OS was found in the training cohort, with 20-year survival rates of 42.6% and 26.3%, respectively. Applying a similar protocol to validation and test cohorts, we found that OS was significantly shorter in the high-risk group than in the low-risk group, regardless of the molecular subtype of BC. Using the immune score model to predict the effect of BC patients to chemotherapy, the survival advantage for the low-risk group was evident among those who received chemotherapy, regardless of the chemotherapy regimen. In evaluating the predictive value of the nomogram, a decision curve showed better predictive accuracy than the standard tumor-node-metastasis (TNM) staging system.
The immune cell infiltration-based immune score model can be effectively and efficiently used to predict the prognosis of BC patients as well as the effect of chemotherapy. |
doi_str_mv | 10.7150/thno.49451 |
format | article |
fullrecord | <record><control><sourceid>proquest_pubme</sourceid><recordid>TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_7667685</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>2461854863</sourcerecordid><originalsourceid>FETCH-LOGICAL-c406t-4b815961bc9f93d3320803c53da1658ddd37abc240dcb3c791af8bc8ecb5a7973</originalsourceid><addsrcrecordid>eNpdkctq3jAQhUVpaUKaTR-gCLopBaeSdd8UQmiTQqCbZC10GedXsKU_kl3I28duLqSdzQzMx-HMHIQ-UnKiqCDf5l0uJ9xwQd-gQ6qZ7pTk5O2r-QAdt3ZL1uKkN9S8RweM9YSznh6iu9OM0zQtGXCAccQpD2mcq5tTyZ13DeLzuoVSAU8lwoj3FWIKc1uHcpNLSw27HHHYwVTmHVS3v8cwDLAhKWNfwbUZB5cD1A_o3eDGBsdP_Qhd__xxdXbRXf4-_3V2etkFTuTcca-pMJL6YAbD4uZYExYEi45KoWOMTDkfek5i8CwoQ92gfdAQvHDKKHaEvj_q7hc_QQyQ17NGu69pcvXeFpfsv5ucdvam_LFKSiW1WAW-PAnUcrdAm-2U2vYkl6EszfZcUi24lmxFP_-H3pal5vU82wuje86p2qivj1SopbUKw4sZSuwWpt3CtH_DXOFPr-2_oM_RsQcyrp1L</addsrcrecordid><sourcetype>Open Access Repository</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2598244173</pqid></control><display><type>article</type><title>An immune cell infiltration-based immune score model predicts prognosis and chemotherapy effects in breast cancer</title><source>Publicly Available Content Database (Proquest) (PQ_SDU_P3)</source><source>PubMed Central</source><creator>Sui, Silei ; An, Xin ; Xu, Caiming ; Li, Zongjuan ; Hua, Yijun ; Huang, Geya ; Sui, Sibei ; Long, Qian ; Sui, Yanxia ; Xiong, Yuqing ; Ntim, Micheal ; Guo, Wei ; Chen, Miao ; Deng, Wuguo ; Xiao, Xiangsheng ; Li, Man</creator><creatorcontrib>Sui, Silei ; An, Xin ; Xu, Caiming ; Li, Zongjuan ; Hua, Yijun ; Huang, Geya ; Sui, Sibei ; Long, Qian ; Sui, Yanxia ; Xiong, Yuqing ; Ntim, Micheal ; Guo, Wei ; Chen, Miao ; Deng, Wuguo ; Xiao, Xiangsheng ; Li, Man</creatorcontrib><description>Immune cells have essential auxiliary functions and influence clinical outcomes in cancer, with high immune infiltration being associated with improved clinical outcomes and better response to treatment in breast cancer (BC). However, studies to date have not fully considered the tumor-infiltrating immune cell (TIIC) landscape in tumors. This study investigated potential biomarkers based on TIICs to improve prognosis and treatment effect in BC.
We enrolled 5112 patients for analysis and used cell type identification by estimating relative subsets of RNA transcripts (CIBERSORT), a new computational algorithm, to quantify 22 TIICs in primary BC. From the results of univariate Cox regression, 12 immune cells were determined to be significantly related to the overall survival (OS) of BC patients. Furthermore, least absolute shrinkage and selection operator (LASSO) and multivariate Cox regression analyses were applied to construct an immune prognostic model based on six potential biomarkers. By dividing patients into low- and high-risk groups, a significant distinction in OS was found in the training cohort, with 20-year survival rates of 42.6% and 26.3%, respectively. Applying a similar protocol to validation and test cohorts, we found that OS was significantly shorter in the high-risk group than in the low-risk group, regardless of the molecular subtype of BC. Using the immune score model to predict the effect of BC patients to chemotherapy, the survival advantage for the low-risk group was evident among those who received chemotherapy, regardless of the chemotherapy regimen. In evaluating the predictive value of the nomogram, a decision curve showed better predictive accuracy than the standard tumor-node-metastasis (TNM) staging system.
The immune cell infiltration-based immune score model can be effectively and efficiently used to predict the prognosis of BC patients as well as the effect of chemotherapy.</description><identifier>ISSN: 1838-7640</identifier><identifier>EISSN: 1838-7640</identifier><identifier>DOI: 10.7150/thno.49451</identifier><identifier>PMID: 33204321</identifier><language>eng</language><publisher>Australia: Ivyspring International Publisher Pty Ltd</publisher><subject>Breast cancer ; Cancer therapies ; Chemotherapy ; Clinical outcomes ; Consortia ; Datasets ; Dendritic cells ; Gene expression ; Genomes ; Immune system ; Lymphocytes ; Medical prognosis ; Nomograms ; Research Paper ; Tumors</subject><ispartof>Theranostics, 2020-01, Vol.10 (26), p.11938-11949</ispartof><rights>The author(s).</rights><rights>2020. This work is published under https://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>The author(s) 2020</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c406t-4b815961bc9f93d3320803c53da1658ddd37abc240dcb3c791af8bc8ecb5a7973</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.proquest.com/docview/2598244173/fulltextPDF?pq-origsite=primo$$EPDF$$P50$$Gproquest$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.proquest.com/docview/2598244173?pq-origsite=primo$$EHTML$$P50$$Gproquest$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,885,25753,27924,27925,37012,37013,44590,53791,53793,75126</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/33204321$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Sui, Silei</creatorcontrib><creatorcontrib>An, Xin</creatorcontrib><creatorcontrib>Xu, Caiming</creatorcontrib><creatorcontrib>Li, Zongjuan</creatorcontrib><creatorcontrib>Hua, Yijun</creatorcontrib><creatorcontrib>Huang, Geya</creatorcontrib><creatorcontrib>Sui, Sibei</creatorcontrib><creatorcontrib>Long, Qian</creatorcontrib><creatorcontrib>Sui, Yanxia</creatorcontrib><creatorcontrib>Xiong, Yuqing</creatorcontrib><creatorcontrib>Ntim, Micheal</creatorcontrib><creatorcontrib>Guo, Wei</creatorcontrib><creatorcontrib>Chen, Miao</creatorcontrib><creatorcontrib>Deng, Wuguo</creatorcontrib><creatorcontrib>Xiao, Xiangsheng</creatorcontrib><creatorcontrib>Li, Man</creatorcontrib><title>An immune cell infiltration-based immune score model predicts prognosis and chemotherapy effects in breast cancer</title><title>Theranostics</title><addtitle>Theranostics</addtitle><description>Immune cells have essential auxiliary functions and influence clinical outcomes in cancer, with high immune infiltration being associated with improved clinical outcomes and better response to treatment in breast cancer (BC). However, studies to date have not fully considered the tumor-infiltrating immune cell (TIIC) landscape in tumors. This study investigated potential biomarkers based on TIICs to improve prognosis and treatment effect in BC.
We enrolled 5112 patients for analysis and used cell type identification by estimating relative subsets of RNA transcripts (CIBERSORT), a new computational algorithm, to quantify 22 TIICs in primary BC. From the results of univariate Cox regression, 12 immune cells were determined to be significantly related to the overall survival (OS) of BC patients. Furthermore, least absolute shrinkage and selection operator (LASSO) and multivariate Cox regression analyses were applied to construct an immune prognostic model based on six potential biomarkers. By dividing patients into low- and high-risk groups, a significant distinction in OS was found in the training cohort, with 20-year survival rates of 42.6% and 26.3%, respectively. Applying a similar protocol to validation and test cohorts, we found that OS was significantly shorter in the high-risk group than in the low-risk group, regardless of the molecular subtype of BC. Using the immune score model to predict the effect of BC patients to chemotherapy, the survival advantage for the low-risk group was evident among those who received chemotherapy, regardless of the chemotherapy regimen. In evaluating the predictive value of the nomogram, a decision curve showed better predictive accuracy than the standard tumor-node-metastasis (TNM) staging system.
The immune cell infiltration-based immune score model can be effectively and efficiently used to predict the prognosis of BC patients as well as the effect of chemotherapy.</description><subject>Breast cancer</subject><subject>Cancer therapies</subject><subject>Chemotherapy</subject><subject>Clinical outcomes</subject><subject>Consortia</subject><subject>Datasets</subject><subject>Dendritic cells</subject><subject>Gene expression</subject><subject>Genomes</subject><subject>Immune system</subject><subject>Lymphocytes</subject><subject>Medical prognosis</subject><subject>Nomograms</subject><subject>Research Paper</subject><subject>Tumors</subject><issn>1838-7640</issn><issn>1838-7640</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2020</creationdate><recordtype>article</recordtype><sourceid>PIMPY</sourceid><recordid>eNpdkctq3jAQhUVpaUKaTR-gCLopBaeSdd8UQmiTQqCbZC10GedXsKU_kl3I28duLqSdzQzMx-HMHIQ-UnKiqCDf5l0uJ9xwQd-gQ6qZ7pTk5O2r-QAdt3ZL1uKkN9S8RweM9YSznh6iu9OM0zQtGXCAccQpD2mcq5tTyZ13DeLzuoVSAU8lwoj3FWIKc1uHcpNLSw27HHHYwVTmHVS3v8cwDLAhKWNfwbUZB5cD1A_o3eDGBsdP_Qhd__xxdXbRXf4-_3V2etkFTuTcca-pMJL6YAbD4uZYExYEi45KoWOMTDkfek5i8CwoQ92gfdAQvHDKKHaEvj_q7hc_QQyQ17NGu69pcvXeFpfsv5ucdvam_LFKSiW1WAW-PAnUcrdAm-2U2vYkl6EszfZcUi24lmxFP_-H3pal5vU82wuje86p2qivj1SopbUKw4sZSuwWpt3CtH_DXOFPr-2_oM_RsQcyrp1L</recordid><startdate>20200101</startdate><enddate>20200101</enddate><creator>Sui, Silei</creator><creator>An, Xin</creator><creator>Xu, Caiming</creator><creator>Li, Zongjuan</creator><creator>Hua, Yijun</creator><creator>Huang, Geya</creator><creator>Sui, Sibei</creator><creator>Long, Qian</creator><creator>Sui, Yanxia</creator><creator>Xiong, Yuqing</creator><creator>Ntim, Micheal</creator><creator>Guo, Wei</creator><creator>Chen, Miao</creator><creator>Deng, Wuguo</creator><creator>Xiao, Xiangsheng</creator><creator>Li, Man</creator><general>Ivyspring International Publisher Pty Ltd</general><general>Ivyspring International Publisher</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7X7</scope><scope>7XB</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BENPR</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>K9.</scope><scope>M0S</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20200101</creationdate><title>An immune cell infiltration-based immune score model predicts prognosis and chemotherapy effects in breast cancer</title><author>Sui, Silei ; An, Xin ; Xu, Caiming ; Li, Zongjuan ; Hua, Yijun ; Huang, Geya ; Sui, Sibei ; Long, Qian ; Sui, Yanxia ; Xiong, Yuqing ; Ntim, Micheal ; Guo, Wei ; Chen, Miao ; Deng, Wuguo ; Xiao, Xiangsheng ; Li, Man</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c406t-4b815961bc9f93d3320803c53da1658ddd37abc240dcb3c791af8bc8ecb5a7973</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2020</creationdate><topic>Breast cancer</topic><topic>Cancer therapies</topic><topic>Chemotherapy</topic><topic>Clinical outcomes</topic><topic>Consortia</topic><topic>Datasets</topic><topic>Dendritic cells</topic><topic>Gene expression</topic><topic>Genomes</topic><topic>Immune system</topic><topic>Lymphocytes</topic><topic>Medical prognosis</topic><topic>Nomograms</topic><topic>Research Paper</topic><topic>Tumors</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Sui, Silei</creatorcontrib><creatorcontrib>An, Xin</creatorcontrib><creatorcontrib>Xu, Caiming</creatorcontrib><creatorcontrib>Li, Zongjuan</creatorcontrib><creatorcontrib>Hua, Yijun</creatorcontrib><creatorcontrib>Huang, Geya</creatorcontrib><creatorcontrib>Sui, Sibei</creatorcontrib><creatorcontrib>Long, Qian</creatorcontrib><creatorcontrib>Sui, Yanxia</creatorcontrib><creatorcontrib>Xiong, Yuqing</creatorcontrib><creatorcontrib>Ntim, Micheal</creatorcontrib><creatorcontrib>Guo, Wei</creatorcontrib><creatorcontrib>Chen, Miao</creatorcontrib><creatorcontrib>Deng, Wuguo</creatorcontrib><creatorcontrib>Xiao, Xiangsheng</creatorcontrib><creatorcontrib>Li, Man</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest Central</collection><collection>ProQuest Central Essentials</collection><collection>ProQuest Central</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Publicly Available Content Database (Proquest) (PQ_SDU_P3)</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Theranostics</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Sui, Silei</au><au>An, Xin</au><au>Xu, Caiming</au><au>Li, Zongjuan</au><au>Hua, Yijun</au><au>Huang, Geya</au><au>Sui, Sibei</au><au>Long, Qian</au><au>Sui, Yanxia</au><au>Xiong, Yuqing</au><au>Ntim, Micheal</au><au>Guo, Wei</au><au>Chen, Miao</au><au>Deng, Wuguo</au><au>Xiao, Xiangsheng</au><au>Li, Man</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>An immune cell infiltration-based immune score model predicts prognosis and chemotherapy effects in breast cancer</atitle><jtitle>Theranostics</jtitle><addtitle>Theranostics</addtitle><date>2020-01-01</date><risdate>2020</risdate><volume>10</volume><issue>26</issue><spage>11938</spage><epage>11949</epage><pages>11938-11949</pages><issn>1838-7640</issn><eissn>1838-7640</eissn><abstract>Immune cells have essential auxiliary functions and influence clinical outcomes in cancer, with high immune infiltration being associated with improved clinical outcomes and better response to treatment in breast cancer (BC). However, studies to date have not fully considered the tumor-infiltrating immune cell (TIIC) landscape in tumors. This study investigated potential biomarkers based on TIICs to improve prognosis and treatment effect in BC.
We enrolled 5112 patients for analysis and used cell type identification by estimating relative subsets of RNA transcripts (CIBERSORT), a new computational algorithm, to quantify 22 TIICs in primary BC. From the results of univariate Cox regression, 12 immune cells were determined to be significantly related to the overall survival (OS) of BC patients. Furthermore, least absolute shrinkage and selection operator (LASSO) and multivariate Cox regression analyses were applied to construct an immune prognostic model based on six potential biomarkers. By dividing patients into low- and high-risk groups, a significant distinction in OS was found in the training cohort, with 20-year survival rates of 42.6% and 26.3%, respectively. Applying a similar protocol to validation and test cohorts, we found that OS was significantly shorter in the high-risk group than in the low-risk group, regardless of the molecular subtype of BC. Using the immune score model to predict the effect of BC patients to chemotherapy, the survival advantage for the low-risk group was evident among those who received chemotherapy, regardless of the chemotherapy regimen. In evaluating the predictive value of the nomogram, a decision curve showed better predictive accuracy than the standard tumor-node-metastasis (TNM) staging system.
The immune cell infiltration-based immune score model can be effectively and efficiently used to predict the prognosis of BC patients as well as the effect of chemotherapy.</abstract><cop>Australia</cop><pub>Ivyspring International Publisher Pty Ltd</pub><pmid>33204321</pmid><doi>10.7150/thno.49451</doi><tpages>12</tpages><oa>free_for_read</oa></addata></record> |
fulltext | fulltext |
identifier | ISSN: 1838-7640 |
ispartof | Theranostics, 2020-01, Vol.10 (26), p.11938-11949 |
issn | 1838-7640 1838-7640 |
language | eng |
recordid | cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_7667685 |
source | Publicly Available Content Database (Proquest) (PQ_SDU_P3); PubMed Central |
subjects | Breast cancer Cancer therapies Chemotherapy Clinical outcomes Consortia Datasets Dendritic cells Gene expression Genomes Immune system Lymphocytes Medical prognosis Nomograms Research Paper Tumors |
title | An immune cell infiltration-based immune score model predicts prognosis and chemotherapy effects in breast cancer |
url | http://sfxeu10.hosted.exlibrisgroup.com/loughborough?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-03T13%3A13%3A06IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_pubme&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=An%20immune%20cell%20infiltration-based%20immune%20score%20model%20predicts%20prognosis%20and%20chemotherapy%20effects%20in%20breast%20cancer&rft.jtitle=Theranostics&rft.au=Sui,%20Silei&rft.date=2020-01-01&rft.volume=10&rft.issue=26&rft.spage=11938&rft.epage=11949&rft.pages=11938-11949&rft.issn=1838-7640&rft.eissn=1838-7640&rft_id=info:doi/10.7150/thno.49451&rft_dat=%3Cproquest_pubme%3E2461854863%3C/proquest_pubme%3E%3Cgrp_id%3Ecdi_FETCH-LOGICAL-c406t-4b815961bc9f93d3320803c53da1658ddd37abc240dcb3c791af8bc8ecb5a7973%3C/grp_id%3E%3Coa%3E%3C/oa%3E%3Curl%3E%3C/url%3E&rft_id=info:oai/&rft_pqid=2598244173&rft_id=info:pmid/33204321&rfr_iscdi=true |