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Molecular detection and genetic characterization of infectious laryngotracheitis virus in poultry in Myanmar
Avian infectious laryngotracheitis (ILT) is a highly contagious viral disease that causes severe economic losses to the poultry industry worldwide. In Southeast Asian countries, including Myanmar, poultry farming is a major industry. Although it is known that infectious respiratory pathogens, includ...
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Published in: | BMC veterinary research 2020-11, Vol.16 (1), p.453-453, Article 453 |
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creator | Yang, Zhiyuan Murata, Shiro Fujisawa, Sotaro Takehara, Masaki Katakura, Ken Hmoon, Myint Myint Win, Shwe Yee Bawm, Saw Konnai, Satoru Ohashi, Kazuhiko |
description | Avian infectious laryngotracheitis (ILT) is a highly contagious viral disease that causes severe economic losses to the poultry industry worldwide. In Southeast Asian countries, including Myanmar, poultry farming is a major industry. Although it is known that infectious respiratory pathogens, including infectious laryngotracheitis virus (ILTV), are a major threat to poultry farms, there are no data currently available on the epidemiology of ILTV in Myanmar. Therefore, in this study, we conducted a molecular detection of ILTV in 20 poultry farms in Myanmar.
Of the 57 tested oropharyngeal swabs, 10 were positive for ILTV by polymerase chain reaction of a 647 bp region of the thymidine kinase (TK) gene, giving a prevalence of ILTV of 17.5% (10/57). Further sequencing analysis of infected cell protein 4 (ICP4) gene and glycoprotein B, G, and J (gB, gG, and gJ) genes indicated that these isolates were field strains. Phylogenetic analysis revealed that the Myanmar strains clustered together in a single branch and were closely related to other reference strains isolated from Asian countries.
This study demonstrated the presence of ILTV in poultry farms in Myanmar. The genetic characterization analysis performed provides the fundamental data for epidemiological studies that monitor circulating strains of ILTV in Myanmar. |
doi_str_mv | 10.1186/s12917-020-02666-z |
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Of the 57 tested oropharyngeal swabs, 10 were positive for ILTV by polymerase chain reaction of a 647 bp region of the thymidine kinase (TK) gene, giving a prevalence of ILTV of 17.5% (10/57). Further sequencing analysis of infected cell protein 4 (ICP4) gene and glycoprotein B, G, and J (gB, gG, and gJ) genes indicated that these isolates were field strains. Phylogenetic analysis revealed that the Myanmar strains clustered together in a single branch and were closely related to other reference strains isolated from Asian countries.
This study demonstrated the presence of ILTV in poultry farms in Myanmar. The genetic characterization analysis performed provides the fundamental data for epidemiological studies that monitor circulating strains of ILTV in Myanmar.</description><identifier>ISSN: 1746-6148</identifier><identifier>EISSN: 1746-6148</identifier><identifier>DOI: 10.1186/s12917-020-02666-z</identifier><identifier>PMID: 33228640</identifier><language>eng</language><publisher>England: BioMed Central Ltd</publisher><subject>Animals ; Avian laryngotracheitis ; Chickens ; Diagnosis ; Disease ; Diseases ; Epidemiology ; Farms ; Female ; Gene expression ; Genetic analysis ; Genetic aspects ; Glycoprotein B ; Herpes ; Herpesviridae Infections - epidemiology ; Herpesviridae Infections - veterinary ; Herpesvirus 1, Gallid - genetics ; Herpesvirus 1, Gallid - isolation & purification ; Herpesvirus diseases ; Infections ; Influenza ; Laryngotracheitis ; Molecular diagnostic techniques ; Mortality ; Mutation ; Myanmar - epidemiology ; Phylogenetics ; Phylogeny ; Polymerase chain reaction ; Polymerase Chain Reaction - veterinary ; Poultry ; Poultry Diseases - epidemiology ; Poultry Diseases - virology ; Poultry farming ; Respiratory diseases ; Sequence analysis ; Strains (organisms) ; Thymidine ; Thymidine kinase ; Vaccines ; Viral diseases ; Virulence ; Viruses</subject><ispartof>BMC veterinary research, 2020-11, Vol.16 (1), p.453-453, Article 453</ispartof><rights>COPYRIGHT 2020 BioMed Central Ltd.</rights><rights>2020. This work is licensed under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>The Author(s) 2020</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c563t-f7c7f6435051e44ff66fb3f63a6c12ef5b4a3eb660271df443b6bc8cbad7d0033</citedby><cites>FETCH-LOGICAL-c563t-f7c7f6435051e44ff66fb3f63a6c12ef5b4a3eb660271df443b6bc8cbad7d0033</cites><orcidid>0000-0002-2569-899X</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC7685572/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.proquest.com/docview/2471199624?pq-origsite=primo$$EHTML$$P50$$Gproquest$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,885,25753,27924,27925,37012,37013,44590,53791,53793</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/33228640$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Yang, Zhiyuan</creatorcontrib><creatorcontrib>Murata, Shiro</creatorcontrib><creatorcontrib>Fujisawa, Sotaro</creatorcontrib><creatorcontrib>Takehara, Masaki</creatorcontrib><creatorcontrib>Katakura, Ken</creatorcontrib><creatorcontrib>Hmoon, Myint Myint</creatorcontrib><creatorcontrib>Win, Shwe Yee</creatorcontrib><creatorcontrib>Bawm, Saw</creatorcontrib><creatorcontrib>Konnai, Satoru</creatorcontrib><creatorcontrib>Ohashi, Kazuhiko</creatorcontrib><title>Molecular detection and genetic characterization of infectious laryngotracheitis virus in poultry in Myanmar</title><title>BMC veterinary research</title><addtitle>BMC Vet Res</addtitle><description>Avian infectious laryngotracheitis (ILT) is a highly contagious viral disease that causes severe economic losses to the poultry industry worldwide. In Southeast Asian countries, including Myanmar, poultry farming is a major industry. Although it is known that infectious respiratory pathogens, including infectious laryngotracheitis virus (ILTV), are a major threat to poultry farms, there are no data currently available on the epidemiology of ILTV in Myanmar. Therefore, in this study, we conducted a molecular detection of ILTV in 20 poultry farms in Myanmar.
Of the 57 tested oropharyngeal swabs, 10 were positive for ILTV by polymerase chain reaction of a 647 bp region of the thymidine kinase (TK) gene, giving a prevalence of ILTV of 17.5% (10/57). Further sequencing analysis of infected cell protein 4 (ICP4) gene and glycoprotein B, G, and J (gB, gG, and gJ) genes indicated that these isolates were field strains. Phylogenetic analysis revealed that the Myanmar strains clustered together in a single branch and were closely related to other reference strains isolated from Asian countries.
This study demonstrated the presence of ILTV in poultry farms in Myanmar. The genetic characterization analysis performed provides the fundamental data for epidemiological studies that monitor circulating strains of ILTV in Myanmar.</description><subject>Animals</subject><subject>Avian laryngotracheitis</subject><subject>Chickens</subject><subject>Diagnosis</subject><subject>Disease</subject><subject>Diseases</subject><subject>Epidemiology</subject><subject>Farms</subject><subject>Female</subject><subject>Gene expression</subject><subject>Genetic analysis</subject><subject>Genetic aspects</subject><subject>Glycoprotein B</subject><subject>Herpes</subject><subject>Herpesviridae Infections - epidemiology</subject><subject>Herpesviridae Infections - veterinary</subject><subject>Herpesvirus 1, Gallid - genetics</subject><subject>Herpesvirus 1, Gallid - isolation & purification</subject><subject>Herpesvirus diseases</subject><subject>Infections</subject><subject>Influenza</subject><subject>Laryngotracheitis</subject><subject>Molecular diagnostic techniques</subject><subject>Mortality</subject><subject>Mutation</subject><subject>Myanmar - epidemiology</subject><subject>Phylogenetics</subject><subject>Phylogeny</subject><subject>Polymerase chain reaction</subject><subject>Polymerase Chain Reaction - veterinary</subject><subject>Poultry</subject><subject>Poultry Diseases - epidemiology</subject><subject>Poultry Diseases - virology</subject><subject>Poultry farming</subject><subject>Respiratory diseases</subject><subject>Sequence analysis</subject><subject>Strains (organisms)</subject><subject>Thymidine</subject><subject>Thymidine kinase</subject><subject>Vaccines</subject><subject>Viral diseases</subject><subject>Virulence</subject><subject>Viruses</subject><issn>1746-6148</issn><issn>1746-6148</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2020</creationdate><recordtype>article</recordtype><sourceid>PIMPY</sourceid><recordid>eNptUk1r3DAQNaWlSdP-gR6KoZdenOrLI_tSCKFfkJBLchayPNpV0EpbyQ7s_vpod5M0KUUIDaP3HjOPV1UfKTmltIOvmbKeyoYwUi4ANNtX1TGVAhqgonv9rD6q3uV8S4gQvYS31RHnjHUgyHHlL6NHM3ud6hEnNJOLodZhrBcYcHKmNkudtJkwua3ef0Zbu2D3yDnXhbgJizgVzBLd5HJ951Lpu1Cv4-yntNmVlxsdVjq9r95Y7TN-eHhPqpsf36_PfzUXVz9_n59dNKYFPjVWGmlB8Ja0FIWwFsAO3ALXYChD2w5CcxwACJN0tELwAQbTmUGPciSE85Pq20F3PQ8rHA2GMp9X6-TKEBsVtVMvf4JbqkW8UxK6tpWsCHx5EEjxz4x5UiuXDXqvA5atFRMgiq09kAL9_A_0Ns4plPUKSlLa98DEX9RCe1TFv71jO1F1Bi0BYD3pCur0P6hyRlw5EwNaV_ovCOxAMCnmnNA-7UiJ2mVEHTKiSkbUPiNqW0ifnrvzRHkMBb8HWpe56w</recordid><startdate>20201123</startdate><enddate>20201123</enddate><creator>Yang, Zhiyuan</creator><creator>Murata, Shiro</creator><creator>Fujisawa, Sotaro</creator><creator>Takehara, Masaki</creator><creator>Katakura, Ken</creator><creator>Hmoon, Myint Myint</creator><creator>Win, Shwe Yee</creator><creator>Bawm, Saw</creator><creator>Konnai, Satoru</creator><creator>Ohashi, Kazuhiko</creator><general>BioMed Central Ltd</general><general>BioMed Central</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QG</scope><scope>7U9</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BENPR</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>H94</scope><scope>K9.</scope><scope>M0S</scope><scope>M1P</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>7X8</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0002-2569-899X</orcidid></search><sort><creationdate>20201123</creationdate><title>Molecular detection and genetic characterization of infectious laryngotracheitis virus in poultry in Myanmar</title><author>Yang, Zhiyuan ; Murata, Shiro ; Fujisawa, Sotaro ; Takehara, Masaki ; Katakura, Ken ; Hmoon, Myint Myint ; Win, Shwe Yee ; Bawm, Saw ; Konnai, Satoru ; Ohashi, Kazuhiko</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c563t-f7c7f6435051e44ff66fb3f63a6c12ef5b4a3eb660271df443b6bc8cbad7d0033</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2020</creationdate><topic>Animals</topic><topic>Avian laryngotracheitis</topic><topic>Chickens</topic><topic>Diagnosis</topic><topic>Disease</topic><topic>Diseases</topic><topic>Epidemiology</topic><topic>Farms</topic><topic>Female</topic><topic>Gene expression</topic><topic>Genetic analysis</topic><topic>Genetic aspects</topic><topic>Glycoprotein B</topic><topic>Herpes</topic><topic>Herpesviridae Infections - epidemiology</topic><topic>Herpesviridae Infections - veterinary</topic><topic>Herpesvirus 1, Gallid - genetics</topic><topic>Herpesvirus 1, Gallid - isolation & purification</topic><topic>Herpesvirus diseases</topic><topic>Infections</topic><topic>Influenza</topic><topic>Laryngotracheitis</topic><topic>Molecular diagnostic techniques</topic><topic>Mortality</topic><topic>Mutation</topic><topic>Myanmar - epidemiology</topic><topic>Phylogenetics</topic><topic>Phylogeny</topic><topic>Polymerase chain reaction</topic><topic>Polymerase Chain Reaction - veterinary</topic><topic>Poultry</topic><topic>Poultry Diseases - epidemiology</topic><topic>Poultry Diseases - virology</topic><topic>Poultry farming</topic><topic>Respiratory diseases</topic><topic>Sequence analysis</topic><topic>Strains (organisms)</topic><topic>Thymidine</topic><topic>Thymidine kinase</topic><topic>Vaccines</topic><topic>Viral diseases</topic><topic>Virulence</topic><topic>Viruses</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Yang, Zhiyuan</creatorcontrib><creatorcontrib>Murata, Shiro</creatorcontrib><creatorcontrib>Fujisawa, Sotaro</creatorcontrib><creatorcontrib>Takehara, Masaki</creatorcontrib><creatorcontrib>Katakura, Ken</creatorcontrib><creatorcontrib>Hmoon, Myint Myint</creatorcontrib><creatorcontrib>Win, Shwe Yee</creatorcontrib><creatorcontrib>Bawm, Saw</creatorcontrib><creatorcontrib>Konnai, Satoru</creatorcontrib><creatorcontrib>Ohashi, Kazuhiko</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Animal Behavior Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Health & Medical Collection (Proquest)</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest Central</collection><collection>ProQuest Central Essentials</collection><collection>AUTh Library subscriptions: ProQuest Central</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>PML(ProQuest Medical Library)</collection><collection>Publicly Available Content Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>BMC veterinary research</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Yang, Zhiyuan</au><au>Murata, Shiro</au><au>Fujisawa, Sotaro</au><au>Takehara, Masaki</au><au>Katakura, Ken</au><au>Hmoon, Myint Myint</au><au>Win, Shwe Yee</au><au>Bawm, Saw</au><au>Konnai, Satoru</au><au>Ohashi, Kazuhiko</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Molecular detection and genetic characterization of infectious laryngotracheitis virus in poultry in Myanmar</atitle><jtitle>BMC veterinary research</jtitle><addtitle>BMC Vet Res</addtitle><date>2020-11-23</date><risdate>2020</risdate><volume>16</volume><issue>1</issue><spage>453</spage><epage>453</epage><pages>453-453</pages><artnum>453</artnum><issn>1746-6148</issn><eissn>1746-6148</eissn><abstract>Avian infectious laryngotracheitis (ILT) is a highly contagious viral disease that causes severe economic losses to the poultry industry worldwide. In Southeast Asian countries, including Myanmar, poultry farming is a major industry. Although it is known that infectious respiratory pathogens, including infectious laryngotracheitis virus (ILTV), are a major threat to poultry farms, there are no data currently available on the epidemiology of ILTV in Myanmar. Therefore, in this study, we conducted a molecular detection of ILTV in 20 poultry farms in Myanmar.
Of the 57 tested oropharyngeal swabs, 10 were positive for ILTV by polymerase chain reaction of a 647 bp region of the thymidine kinase (TK) gene, giving a prevalence of ILTV of 17.5% (10/57). Further sequencing analysis of infected cell protein 4 (ICP4) gene and glycoprotein B, G, and J (gB, gG, and gJ) genes indicated that these isolates were field strains. Phylogenetic analysis revealed that the Myanmar strains clustered together in a single branch and were closely related to other reference strains isolated from Asian countries.
This study demonstrated the presence of ILTV in poultry farms in Myanmar. The genetic characterization analysis performed provides the fundamental data for epidemiological studies that monitor circulating strains of ILTV in Myanmar.</abstract><cop>England</cop><pub>BioMed Central Ltd</pub><pmid>33228640</pmid><doi>10.1186/s12917-020-02666-z</doi><tpages>1</tpages><orcidid>https://orcid.org/0000-0002-2569-899X</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Animals Avian laryngotracheitis Chickens Diagnosis Disease Diseases Epidemiology Farms Female Gene expression Genetic analysis Genetic aspects Glycoprotein B Herpes Herpesviridae Infections - epidemiology Herpesviridae Infections - veterinary Herpesvirus 1, Gallid - genetics Herpesvirus 1, Gallid - isolation & purification Herpesvirus diseases Infections Influenza Laryngotracheitis Molecular diagnostic techniques Mortality Mutation Myanmar - epidemiology Phylogenetics Phylogeny Polymerase chain reaction Polymerase Chain Reaction - veterinary Poultry Poultry Diseases - epidemiology Poultry Diseases - virology Poultry farming Respiratory diseases Sequence analysis Strains (organisms) Thymidine Thymidine kinase Vaccines Viral diseases Virulence Viruses |
title | Molecular detection and genetic characterization of infectious laryngotracheitis virus in poultry in Myanmar |
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