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Uranium directly interacts with the DNA repair protein poly (ADP-ribose) polymerase 1
People living in southwest part of United States are exposed to uranium (U) through drinking water, air, and soil. U is radioactive, but independent of this radioactivity also has important toxicological considerations as an environmental metal. At environmentally relevant concentrations, U is both...
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Published in: | Toxicology and applied pharmacology 2021-01, Vol.410, p.115360-115360, Article 115360 |
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description | People living in southwest part of United States are exposed to uranium (U) through drinking water, air, and soil. U is radioactive, but independent of this radioactivity also has important toxicological considerations as an environmental metal. At environmentally relevant concentrations, U is both mutagenic and carcinogenic. Emerging evidence shows that U inhibits DNA repair activity, but how U interacts with DNA repair proteins is still largely unknown. Herein, we report that U directly interacts with the DNA repair protein, Protein Poly (ADP-ribose) Polymerase 1 (PARP-1) through direct binding with the zinc finger motif, resulting in zinc release from zinc finger and DNA binding activity loss of the protein. At the peptide level, instead of direct competition with zinc ion in the zinc finger motif, U does not show thermodynamic advantages over zinc. Furthermore, zinc pre-occupied PARP-1 zinc finger is insensitive to U treatment, but U bound to PARP-1 zinc finger can be partially replaced by zinc. These results provide mechanistic basis on molecular level to U inhibition of DNA repair.
•Uranium can directly bind to DNA repair protein PARP-1.•Zinc finger motif of PARP-1 is the uranium binding site.•Uranium binding impairs PARP-1 activity.•Uranium does not show thermodynamic advantage against zinc. |
doi_str_mv | 10.1016/j.taap.2020.115360 |
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•Uranium can directly bind to DNA repair protein PARP-1.•Zinc finger motif of PARP-1 is the uranium binding site.•Uranium binding impairs PARP-1 activity.•Uranium does not show thermodynamic advantage against zinc.</description><identifier>ISSN: 0041-008X</identifier><identifier>EISSN: 1096-0333</identifier><identifier>DOI: 10.1016/j.taap.2020.115360</identifier><identifier>PMID: 33279515</identifier><language>eng</language><publisher>United States: Elsevier Inc</publisher><subject>Amino Acid Sequence ; Cells, Cultured ; DNA Repair ; DNA Repair - physiology ; DNA Repair - radiation effects ; Environmental Exposure - adverse effects ; Humans ; Infant, Newborn ; Keratinocytes - metabolism ; Keratinocytes - radiation effects ; Poly (ADP-Ribose) Polymerase-1 - genetics ; Poly (ADP-Ribose) Polymerase-1 - metabolism ; Poly (ADP-Ribose) Polymerase-1 - radiation effects ; Protein Binding ; Protein Binding - drug effects ; Protein Binding - physiology ; Uranium ; Uranium - metabolism ; Uranium - toxicity ; Zinc Finger Protein</subject><ispartof>Toxicology and applied pharmacology, 2021-01, Vol.410, p.115360-115360, Article 115360</ispartof><rights>2020 Elsevier Inc.</rights><rights>Copyright © 2020 Elsevier Inc. All rights reserved.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c455t-2017c43677fe6486b34078a586d62ee4b620573103e5433d2c7cb8d651993dfa3</citedby><cites>FETCH-LOGICAL-c455t-2017c43677fe6486b34078a586d62ee4b620573103e5433d2c7cb8d651993dfa3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>230,314,780,784,885,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/33279515$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Zhou, Xixi</creatorcontrib><creatorcontrib>Xue, Bingye</creatorcontrib><creatorcontrib>Medina, Sebastian</creatorcontrib><creatorcontrib>Burchiel, Scott W.</creatorcontrib><creatorcontrib>Liu, Ke Jian</creatorcontrib><title>Uranium directly interacts with the DNA repair protein poly (ADP-ribose) polymerase 1</title><title>Toxicology and applied pharmacology</title><addtitle>Toxicol Appl Pharmacol</addtitle><description>People living in southwest part of United States are exposed to uranium (U) through drinking water, air, and soil. U is radioactive, but independent of this radioactivity also has important toxicological considerations as an environmental metal. At environmentally relevant concentrations, U is both mutagenic and carcinogenic. Emerging evidence shows that U inhibits DNA repair activity, but how U interacts with DNA repair proteins is still largely unknown. Herein, we report that U directly interacts with the DNA repair protein, Protein Poly (ADP-ribose) Polymerase 1 (PARP-1) through direct binding with the zinc finger motif, resulting in zinc release from zinc finger and DNA binding activity loss of the protein. At the peptide level, instead of direct competition with zinc ion in the zinc finger motif, U does not show thermodynamic advantages over zinc. Furthermore, zinc pre-occupied PARP-1 zinc finger is insensitive to U treatment, but U bound to PARP-1 zinc finger can be partially replaced by zinc. These results provide mechanistic basis on molecular level to U inhibition of DNA repair.
•Uranium can directly bind to DNA repair protein PARP-1.•Zinc finger motif of PARP-1 is the uranium binding site.•Uranium binding impairs PARP-1 activity.•Uranium does not show thermodynamic advantage against zinc.</description><subject>Amino Acid Sequence</subject><subject>Cells, Cultured</subject><subject>DNA Repair</subject><subject>DNA Repair - physiology</subject><subject>DNA Repair - radiation effects</subject><subject>Environmental Exposure - adverse effects</subject><subject>Humans</subject><subject>Infant, Newborn</subject><subject>Keratinocytes - metabolism</subject><subject>Keratinocytes - radiation effects</subject><subject>Poly (ADP-Ribose) Polymerase-1 - genetics</subject><subject>Poly (ADP-Ribose) Polymerase-1 - metabolism</subject><subject>Poly (ADP-Ribose) Polymerase-1 - radiation effects</subject><subject>Protein Binding</subject><subject>Protein Binding - drug effects</subject><subject>Protein Binding - physiology</subject><subject>Uranium</subject><subject>Uranium - metabolism</subject><subject>Uranium - toxicity</subject><subject>Zinc Finger Protein</subject><issn>0041-008X</issn><issn>1096-0333</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2021</creationdate><recordtype>article</recordtype><recordid>eNp9kM1r20AQxZeQUjtp_4Ecwh6Tg9zZbwlKwcT5gtD2UENvy2o1jtfYktjdpOS_r1wlIbn0NPDmvTfMj5ATBjMGTH_ZzLJz_YwDHwSmhIYDMmVQ6QKEEIdkCiBZAVD-npCjlDYAUEnJPpKJENxUiqkpWS6ja8PDjjYhos_bJxrajNH5nOifkNc0r5Euvs9pxN6FSPvYZQwt7bvBejZf_CxiqLuE5_-U3ZBMSNkn8mHltgk_P89jsry6_HVxU9z9uL69mN8VXiqVCw7MeCm0MSvUstS1kGBKp0rdaI4oa81BGcFAoJJCNNwbX5eNVqyqRLNy4ph8G3v7h3qHjcc2R7e1fQw7F59s54J9v2nD2t53j9YYo3jJhwI-FvjYpRRx9ZplYPeQ7cbuIds9ZDtCHkKnb6--Rl6oDoavowGH3x8DRpt8wNbjCNk2Xfhf_1_v9I24</recordid><startdate>20210101</startdate><enddate>20210101</enddate><creator>Zhou, Xixi</creator><creator>Xue, Bingye</creator><creator>Medina, Sebastian</creator><creator>Burchiel, Scott W.</creator><creator>Liu, Ke Jian</creator><general>Elsevier Inc</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>5PM</scope></search><sort><creationdate>20210101</creationdate><title>Uranium directly interacts with the DNA repair protein poly (ADP-ribose) polymerase 1</title><author>Zhou, Xixi ; Xue, Bingye ; Medina, Sebastian ; Burchiel, Scott W. ; Liu, Ke Jian</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c455t-2017c43677fe6486b34078a586d62ee4b620573103e5433d2c7cb8d651993dfa3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2021</creationdate><topic>Amino Acid Sequence</topic><topic>Cells, Cultured</topic><topic>DNA Repair</topic><topic>DNA Repair - physiology</topic><topic>DNA Repair - radiation effects</topic><topic>Environmental Exposure - adverse effects</topic><topic>Humans</topic><topic>Infant, Newborn</topic><topic>Keratinocytes - metabolism</topic><topic>Keratinocytes - radiation effects</topic><topic>Poly (ADP-Ribose) Polymerase-1 - genetics</topic><topic>Poly (ADP-Ribose) Polymerase-1 - metabolism</topic><topic>Poly (ADP-Ribose) Polymerase-1 - radiation effects</topic><topic>Protein Binding</topic><topic>Protein Binding - drug effects</topic><topic>Protein Binding - physiology</topic><topic>Uranium</topic><topic>Uranium - metabolism</topic><topic>Uranium - toxicity</topic><topic>Zinc Finger Protein</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Zhou, Xixi</creatorcontrib><creatorcontrib>Xue, Bingye</creatorcontrib><creatorcontrib>Medina, Sebastian</creatorcontrib><creatorcontrib>Burchiel, Scott W.</creatorcontrib><creatorcontrib>Liu, Ke Jian</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Toxicology and applied pharmacology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Zhou, Xixi</au><au>Xue, Bingye</au><au>Medina, Sebastian</au><au>Burchiel, Scott W.</au><au>Liu, Ke Jian</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Uranium directly interacts with the DNA repair protein poly (ADP-ribose) polymerase 1</atitle><jtitle>Toxicology and applied pharmacology</jtitle><addtitle>Toxicol Appl Pharmacol</addtitle><date>2021-01-01</date><risdate>2021</risdate><volume>410</volume><spage>115360</spage><epage>115360</epage><pages>115360-115360</pages><artnum>115360</artnum><issn>0041-008X</issn><eissn>1096-0333</eissn><abstract>People living in southwest part of United States are exposed to uranium (U) through drinking water, air, and soil. U is radioactive, but independent of this radioactivity also has important toxicological considerations as an environmental metal. At environmentally relevant concentrations, U is both mutagenic and carcinogenic. Emerging evidence shows that U inhibits DNA repair activity, but how U interacts with DNA repair proteins is still largely unknown. Herein, we report that U directly interacts with the DNA repair protein, Protein Poly (ADP-ribose) Polymerase 1 (PARP-1) through direct binding with the zinc finger motif, resulting in zinc release from zinc finger and DNA binding activity loss of the protein. At the peptide level, instead of direct competition with zinc ion in the zinc finger motif, U does not show thermodynamic advantages over zinc. Furthermore, zinc pre-occupied PARP-1 zinc finger is insensitive to U treatment, but U bound to PARP-1 zinc finger can be partially replaced by zinc. These results provide mechanistic basis on molecular level to U inhibition of DNA repair.
•Uranium can directly bind to DNA repair protein PARP-1.•Zinc finger motif of PARP-1 is the uranium binding site.•Uranium binding impairs PARP-1 activity.•Uranium does not show thermodynamic advantage against zinc.</abstract><cop>United States</cop><pub>Elsevier Inc</pub><pmid>33279515</pmid><doi>10.1016/j.taap.2020.115360</doi><tpages>1</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Amino Acid Sequence Cells, Cultured DNA Repair DNA Repair - physiology DNA Repair - radiation effects Environmental Exposure - adverse effects Humans Infant, Newborn Keratinocytes - metabolism Keratinocytes - radiation effects Poly (ADP-Ribose) Polymerase-1 - genetics Poly (ADP-Ribose) Polymerase-1 - metabolism Poly (ADP-Ribose) Polymerase-1 - radiation effects Protein Binding Protein Binding - drug effects Protein Binding - physiology Uranium Uranium - metabolism Uranium - toxicity Zinc Finger Protein |
title | Uranium directly interacts with the DNA repair protein poly (ADP-ribose) polymerase 1 |
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