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Healthcare-Associated Laboratory-Confirmed Bloodstream Infections-Species Diversity and Resistance Mechanisms, a Four-Year Retrospective Laboratory-Based Study in the South of Poland
Regardless of the country, advancements in medical care and infection prevention and control of bloodstream infections (BSIs) are an enormous burden of modern medicine. The aim of our study was to describe the epidemiology and drug-resistance of laboratory-confirmed BSI (LC-BSIs) among adult patient...
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Published in: | International journal of environmental research and public health 2021-03, Vol.18 (5), p.2785 |
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description | Regardless of the country, advancements in medical care and infection prevention and control of bloodstream infections (BSIs) are an enormous burden of modern medicine.
The aim of our study was to describe the epidemiology and drug-resistance of laboratory-confirmed BSI (LC-BSIs) among adult patients of 16 hospitals in the south of Poland.
Data on 4218 LC-BSIs were collected between 2016-2019. The identification of the strains was performed using MALDI-TOF. Resistance mechanisms were investigated according to European Committee on Antimicrobial Susceptibility Testing, EUCAST recommendations.
Blood cultures were collected from 8899 patients, and LC-BSIs were confirmed in 47.4%. The prevalence of Gram-positive bacteria was 70.9%, Gram-negative 27.8% and yeast 1.4%. The most frequently isolated genus was
(50% of all LC-BSIs), with a domination of coagulase-negative staphylococci, while
(13.7%) was the most frequent Gram-negative bacterium. Over 4 years, 108 (2.6%) bacteria were isolated only once, including species from the human microbiota as well as environmental and zoonotic microorganisms. The highest methicillin resistant
(MRSA) prevalence was in intensive care units (ICUs) (55.6%) but
with resistance to macrolides, lincosamides and streptogramins B (MLS
) in surgery was 66.7%. The highest prevalence of
with a high-level aminoglycoside resistance (HLAR) mechanism was in ICUs, (84.6%), while
-HLAR in surgery was 83.3%. All cocci were fully glycopeptide-sensitive. Carbapenem-resistant Gram-negative bacilli were detected only in non-fermentative bacilli group, with prevalence 70% and more.
The BSI microbiology in Polish hospitals was similar to those reported in other studies, but the prevalence of MRSA and enterococci-HLAR was higher than expected, as was the prevalence of carbapenem-resistant non-fermentative bacilli. Modern diagnostic techniques, such as MALDI-TOF, guarantee reliable diagnosis. |
doi_str_mv | 10.3390/ijerph18052785 |
format | article |
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The aim of our study was to describe the epidemiology and drug-resistance of laboratory-confirmed BSI (LC-BSIs) among adult patients of 16 hospitals in the south of Poland.
Data on 4218 LC-BSIs were collected between 2016-2019. The identification of the strains was performed using MALDI-TOF. Resistance mechanisms were investigated according to European Committee on Antimicrobial Susceptibility Testing, EUCAST recommendations.
Blood cultures were collected from 8899 patients, and LC-BSIs were confirmed in 47.4%. The prevalence of Gram-positive bacteria was 70.9%, Gram-negative 27.8% and yeast 1.4%. The most frequently isolated genus was
(50% of all LC-BSIs), with a domination of coagulase-negative staphylococci, while
(13.7%) was the most frequent Gram-negative bacterium. Over 4 years, 108 (2.6%) bacteria were isolated only once, including species from the human microbiota as well as environmental and zoonotic microorganisms. The highest methicillin resistant
(MRSA) prevalence was in intensive care units (ICUs) (55.6%) but
with resistance to macrolides, lincosamides and streptogramins B (MLS
) in surgery was 66.7%. The highest prevalence of
with a high-level aminoglycoside resistance (HLAR) mechanism was in ICUs, (84.6%), while
-HLAR in surgery was 83.3%. All cocci were fully glycopeptide-sensitive. Carbapenem-resistant Gram-negative bacilli were detected only in non-fermentative bacilli group, with prevalence 70% and more.
The BSI microbiology in Polish hospitals was similar to those reported in other studies, but the prevalence of MRSA and enterococci-HLAR was higher than expected, as was the prevalence of carbapenem-resistant non-fermentative bacilli. Modern diagnostic techniques, such as MALDI-TOF, guarantee reliable diagnosis.</description><identifier>ISSN: 1660-4601</identifier><identifier>ISSN: 1661-7827</identifier><identifier>EISSN: 1660-4601</identifier><identifier>DOI: 10.3390/ijerph18052785</identifier><identifier>PMID: 33803428</identifier><language>eng</language><publisher>Switzerland: MDPI AG</publisher><subject>Adult ; Aminoglycosides ; Anti-Bacterial Agents - pharmacology ; Anti-Bacterial Agents - therapeutic use ; Antiinfectives and antibacterials ; Bacilli ; Bacteremia - epidemiology ; Bacteria ; Coagulase ; Cross Infection - drug therapy ; Cross Infection - epidemiology ; Delivery of Health Care ; Drug resistance ; Epidemiology ; Glycopeptides ; Gram-negative bacilli ; Gram-positive bacteria ; Hospitals ; Humans ; Infections ; Intensive care ; Intensive care units ; Laboratories ; Lincosamides ; Methicillin ; Methicillin-Resistant Staphylococcus aureus ; Microbial Sensitivity Tests ; Microbiology ; Microbiota ; Microorganisms ; Mortality ; Patients ; Poland - epidemiology ; Public health ; Retrospective Studies ; Sepsis ; Species diversity ; Staphylococcus aureus ; Streptogramins ; Surgery ; Yeasts</subject><ispartof>International journal of environmental research and public health, 2021-03, Vol.18 (5), p.2785</ispartof><rights>2021. This work is licensed under http://creativecommons.org/licenses/by/3.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>2021 by the authors. 2021</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c418t-ae5f73a795fc4396e3d6cd3a4247c47fd4bf1df769161f56705cfcf36c6d41b3</citedby><cites>FETCH-LOGICAL-c418t-ae5f73a795fc4396e3d6cd3a4247c47fd4bf1df769161f56705cfcf36c6d41b3</cites><orcidid>0000-0003-0756-1639</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.proquest.com/docview/2504382161/fulltextPDF?pq-origsite=primo$$EPDF$$P50$$Gproquest$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.proquest.com/docview/2504382161?pq-origsite=primo$$EHTML$$P50$$Gproquest$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,881,25731,27901,27902,36989,36990,44566,53766,53768,75096</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/33803428$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Chmielarczyk, Agnieszka</creatorcontrib><creatorcontrib>Pomorska-Wesołowska, Monika</creatorcontrib><creatorcontrib>Romaniszyn, Dorota</creatorcontrib><creatorcontrib>Wójkowska-Mach, Jadwiga</creatorcontrib><title>Healthcare-Associated Laboratory-Confirmed Bloodstream Infections-Species Diversity and Resistance Mechanisms, a Four-Year Retrospective Laboratory-Based Study in the South of Poland</title><title>International journal of environmental research and public health</title><addtitle>Int J Environ Res Public Health</addtitle><description>Regardless of the country, advancements in medical care and infection prevention and control of bloodstream infections (BSIs) are an enormous burden of modern medicine.
The aim of our study was to describe the epidemiology and drug-resistance of laboratory-confirmed BSI (LC-BSIs) among adult patients of 16 hospitals in the south of Poland.
Data on 4218 LC-BSIs were collected between 2016-2019. The identification of the strains was performed using MALDI-TOF. Resistance mechanisms were investigated according to European Committee on Antimicrobial Susceptibility Testing, EUCAST recommendations.
Blood cultures were collected from 8899 patients, and LC-BSIs were confirmed in 47.4%. The prevalence of Gram-positive bacteria was 70.9%, Gram-negative 27.8% and yeast 1.4%. The most frequently isolated genus was
(50% of all LC-BSIs), with a domination of coagulase-negative staphylococci, while
(13.7%) was the most frequent Gram-negative bacterium. Over 4 years, 108 (2.6%) bacteria were isolated only once, including species from the human microbiota as well as environmental and zoonotic microorganisms. The highest methicillin resistant
(MRSA) prevalence was in intensive care units (ICUs) (55.6%) but
with resistance to macrolides, lincosamides and streptogramins B (MLS
) in surgery was 66.7%. The highest prevalence of
with a high-level aminoglycoside resistance (HLAR) mechanism was in ICUs, (84.6%), while
-HLAR in surgery was 83.3%. All cocci were fully glycopeptide-sensitive. Carbapenem-resistant Gram-negative bacilli were detected only in non-fermentative bacilli group, with prevalence 70% and more.
The BSI microbiology in Polish hospitals was similar to those reported in other studies, but the prevalence of MRSA and enterococci-HLAR was higher than expected, as was the prevalence of carbapenem-resistant non-fermentative bacilli. Modern diagnostic techniques, such as MALDI-TOF, guarantee reliable diagnosis.</description><subject>Adult</subject><subject>Aminoglycosides</subject><subject>Anti-Bacterial Agents - pharmacology</subject><subject>Anti-Bacterial Agents - therapeutic use</subject><subject>Antiinfectives and antibacterials</subject><subject>Bacilli</subject><subject>Bacteremia - epidemiology</subject><subject>Bacteria</subject><subject>Coagulase</subject><subject>Cross Infection - drug therapy</subject><subject>Cross Infection - epidemiology</subject><subject>Delivery of Health Care</subject><subject>Drug resistance</subject><subject>Epidemiology</subject><subject>Glycopeptides</subject><subject>Gram-negative bacilli</subject><subject>Gram-positive bacteria</subject><subject>Hospitals</subject><subject>Humans</subject><subject>Infections</subject><subject>Intensive care</subject><subject>Intensive care units</subject><subject>Laboratories</subject><subject>Lincosamides</subject><subject>Methicillin</subject><subject>Methicillin-Resistant Staphylococcus aureus</subject><subject>Microbial Sensitivity Tests</subject><subject>Microbiology</subject><subject>Microbiota</subject><subject>Microorganisms</subject><subject>Mortality</subject><subject>Patients</subject><subject>Poland - epidemiology</subject><subject>Public health</subject><subject>Retrospective Studies</subject><subject>Sepsis</subject><subject>Species diversity</subject><subject>Staphylococcus aureus</subject><subject>Streptogramins</subject><subject>Surgery</subject><subject>Yeasts</subject><issn>1660-4601</issn><issn>1661-7827</issn><issn>1660-4601</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2021</creationdate><recordtype>article</recordtype><sourceid>PIMPY</sourceid><recordid>eNpdkkFv1DAQhSMEoqVw5YgsceFAih07jnNBahdKKy0Csb1wirzOmHiVtYPHWWn_GL8Pr1qqLSdbns9v5j1NUbxm9Jzzln5wG4jTwBStq0bVT4pTJiUthaTs6dH9pHiBuKGUKyHb58UJ54pyUanT4s816DENRkcoLxCDcTpBT5Z6HaJOIe7LRfDWxW1-vBxD6DFF0Fty4y2Y5ILHcjWBcYDkk9tBRJf2RPue_AB0mLQ3QL6CGbR3uMX3RJOrMMfyJ-iYkRQDTgedHRy3vNSY263S3O-J8yQNQFZhTgMJlnwPY5Z_WTyzekR4dX-eFbdXn28X1-Xy25ebxcWyNIKpVGqobcN109bWCN5K4L00PdeiEo0Rje3F2rLeNrJlktlaNrQ21lgujewFW_Oz4uOd7DSvcwIGfIp67Kbotjruu6Bd97ji3dD9CruuaWVT1SILvLsXiOH3DJi6rUMDY_YAYcauqqmqVSVUldG3_6GbnJTP7g6U4KrKM2bq_I4yOTqMYB-GYbQ7bET3eCPyhzfHFh7wfyvA_wJOU7gZ</recordid><startdate>20210309</startdate><enddate>20210309</enddate><creator>Chmielarczyk, Agnieszka</creator><creator>Pomorska-Wesołowska, Monika</creator><creator>Romaniszyn, Dorota</creator><creator>Wójkowska-Mach, Jadwiga</creator><general>MDPI AG</general><general>MDPI</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8C1</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BENPR</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>K9.</scope><scope>M0S</scope><scope>M1P</scope><scope>PHGZM</scope><scope>PHGZT</scope><scope>PIMPY</scope><scope>PJZUB</scope><scope>PKEHL</scope><scope>PPXIY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>7X8</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0003-0756-1639</orcidid></search><sort><creationdate>20210309</creationdate><title>Healthcare-Associated Laboratory-Confirmed Bloodstream Infections-Species Diversity and Resistance Mechanisms, a Four-Year Retrospective Laboratory-Based Study in the South of Poland</title><author>Chmielarczyk, Agnieszka ; Pomorska-Wesołowska, Monika ; Romaniszyn, Dorota ; Wójkowska-Mach, Jadwiga</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c418t-ae5f73a795fc4396e3d6cd3a4247c47fd4bf1df769161f56705cfcf36c6d41b3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2021</creationdate><topic>Adult</topic><topic>Aminoglycosides</topic><topic>Anti-Bacterial Agents - pharmacology</topic><topic>Anti-Bacterial Agents - therapeutic use</topic><topic>Antiinfectives and antibacterials</topic><topic>Bacilli</topic><topic>Bacteremia - epidemiology</topic><topic>Bacteria</topic><topic>Coagulase</topic><topic>Cross Infection - drug therapy</topic><topic>Cross Infection - epidemiology</topic><topic>Delivery of Health Care</topic><topic>Drug resistance</topic><topic>Epidemiology</topic><topic>Glycopeptides</topic><topic>Gram-negative bacilli</topic><topic>Gram-positive bacteria</topic><topic>Hospitals</topic><topic>Humans</topic><topic>Infections</topic><topic>Intensive care</topic><topic>Intensive care units</topic><topic>Laboratories</topic><topic>Lincosamides</topic><topic>Methicillin</topic><topic>Methicillin-Resistant Staphylococcus aureus</topic><topic>Microbial Sensitivity Tests</topic><topic>Microbiology</topic><topic>Microbiota</topic><topic>Microorganisms</topic><topic>Mortality</topic><topic>Patients</topic><topic>Poland - epidemiology</topic><topic>Public health</topic><topic>Retrospective Studies</topic><topic>Sepsis</topic><topic>Species diversity</topic><topic>Staphylococcus aureus</topic><topic>Streptogramins</topic><topic>Surgery</topic><topic>Yeasts</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Chmielarczyk, Agnieszka</creatorcontrib><creatorcontrib>Pomorska-Wesołowska, Monika</creatorcontrib><creatorcontrib>Romaniszyn, Dorota</creatorcontrib><creatorcontrib>Wójkowska-Mach, Jadwiga</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Public Health Database</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>ProQuest Central</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>ProQuest Central (New)</collection><collection>ProQuest One Academic (New)</collection><collection>Publicly Available Content Database</collection><collection>ProQuest Health & Medical Research Collection</collection><collection>ProQuest One Academic Middle East (New)</collection><collection>ProQuest One Health & Nursing</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>International journal of environmental research and public health</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Chmielarczyk, Agnieszka</au><au>Pomorska-Wesołowska, Monika</au><au>Romaniszyn, Dorota</au><au>Wójkowska-Mach, Jadwiga</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Healthcare-Associated Laboratory-Confirmed Bloodstream Infections-Species Diversity and Resistance Mechanisms, a Four-Year Retrospective Laboratory-Based Study in the South of Poland</atitle><jtitle>International journal of environmental research and public health</jtitle><addtitle>Int J Environ Res Public Health</addtitle><date>2021-03-09</date><risdate>2021</risdate><volume>18</volume><issue>5</issue><spage>2785</spage><pages>2785-</pages><issn>1660-4601</issn><issn>1661-7827</issn><eissn>1660-4601</eissn><abstract>Regardless of the country, advancements in medical care and infection prevention and control of bloodstream infections (BSIs) are an enormous burden of modern medicine.
The aim of our study was to describe the epidemiology and drug-resistance of laboratory-confirmed BSI (LC-BSIs) among adult patients of 16 hospitals in the south of Poland.
Data on 4218 LC-BSIs were collected between 2016-2019. The identification of the strains was performed using MALDI-TOF. Resistance mechanisms were investigated according to European Committee on Antimicrobial Susceptibility Testing, EUCAST recommendations.
Blood cultures were collected from 8899 patients, and LC-BSIs were confirmed in 47.4%. The prevalence of Gram-positive bacteria was 70.9%, Gram-negative 27.8% and yeast 1.4%. The most frequently isolated genus was
(50% of all LC-BSIs), with a domination of coagulase-negative staphylococci, while
(13.7%) was the most frequent Gram-negative bacterium. Over 4 years, 108 (2.6%) bacteria were isolated only once, including species from the human microbiota as well as environmental and zoonotic microorganisms. The highest methicillin resistant
(MRSA) prevalence was in intensive care units (ICUs) (55.6%) but
with resistance to macrolides, lincosamides and streptogramins B (MLS
) in surgery was 66.7%. The highest prevalence of
with a high-level aminoglycoside resistance (HLAR) mechanism was in ICUs, (84.6%), while
-HLAR in surgery was 83.3%. All cocci were fully glycopeptide-sensitive. Carbapenem-resistant Gram-negative bacilli were detected only in non-fermentative bacilli group, with prevalence 70% and more.
The BSI microbiology in Polish hospitals was similar to those reported in other studies, but the prevalence of MRSA and enterococci-HLAR was higher than expected, as was the prevalence of carbapenem-resistant non-fermentative bacilli. Modern diagnostic techniques, such as MALDI-TOF, guarantee reliable diagnosis.</abstract><cop>Switzerland</cop><pub>MDPI AG</pub><pmid>33803428</pmid><doi>10.3390/ijerph18052785</doi><orcidid>https://orcid.org/0000-0003-0756-1639</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Adult Aminoglycosides Anti-Bacterial Agents - pharmacology Anti-Bacterial Agents - therapeutic use Antiinfectives and antibacterials Bacilli Bacteremia - epidemiology Bacteria Coagulase Cross Infection - drug therapy Cross Infection - epidemiology Delivery of Health Care Drug resistance Epidemiology Glycopeptides Gram-negative bacilli Gram-positive bacteria Hospitals Humans Infections Intensive care Intensive care units Laboratories Lincosamides Methicillin Methicillin-Resistant Staphylococcus aureus Microbial Sensitivity Tests Microbiology Microbiota Microorganisms Mortality Patients Poland - epidemiology Public health Retrospective Studies Sepsis Species diversity Staphylococcus aureus Streptogramins Surgery Yeasts |
title | Healthcare-Associated Laboratory-Confirmed Bloodstream Infections-Species Diversity and Resistance Mechanisms, a Four-Year Retrospective Laboratory-Based Study in the South of Poland |
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