Transcriptome-based approaches for clarification of nutritional responses and improvement of crop production

Genome-wide transcriptome profiling is a powerful tool for identifying key genes and pathways involved in plant development and physiological processes. This review summarizes studies that have used transcriptome profiling mainly in rice to focus on responses to macronutrients such as nitrogen, phos...

Full description

Saved in:
Bibliographic Details
Published in:Breeding Science 2021, Vol.71(1), pp.76-88
Main Authors: Takehisa, Hinako, Sato, Yutaka
Format: Article
Language:English
Subjects:
Agricultural production
Computer architecture
Crop production
field
Gene expression
Genomes
Invited Review
Nutrient transport
Nutrient uptake
nutritional response
Phosphorus
Plant breeding
Potassium
Regulatory mechanisms (biology)
rice
root
transcriptome profiling
Transcriptomes
Citations: Items that this one cites
Items that cite this one
Online Access:Get full text
Tags: Add Tag
No Tags, Be the first to tag this record!
Description
Summary:Genome-wide transcriptome profiling is a powerful tool for identifying key genes and pathways involved in plant development and physiological processes. This review summarizes studies that have used transcriptome profiling mainly in rice to focus on responses to macronutrients such as nitrogen, phosphorus and potassium, and spatio-temporal root profiling in relation to the regulation of root system architecture as well as nutrient uptake and transport. We also discuss strategies based on meta- and co-expression analyses with different attributed transcriptome data, which can be used for investigating the regulatory mechanisms and dynamics of nutritional responses and adaptation, and speculate on further advances in transcriptome profiling that could have potential application to crop breeding and cultivation.
ISSN:1344-7610
1347-3735
DOI:10.1270/jsbbs.20098