The complete chloroplast genome of Epimedium sutchuenense Franch. (Berberidaceae)

Epimedium L. is the largest herbaceous genus in the family Berberidaceae which comprises more than 60 species. Epimedium sutchuenense Franch. is narrowly inhabited in the Daba Mountains of China. In the current study, we assembled the first complete chloroplast genome of E. sutchuenense through Illu...

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Published in:Mitochondrial DNA. Part B. Resources 2021-11, Vol.6 (11), p.3289-3291
Main Authors: Liu, Xiang, Zhang, Yixin, Zhang, Cheng, Xu, Chaoqun, Qin, Weihan, Shen, Guoan, Guo, Baolin
Format: Article
Language:English
Subjects:
Berberidaceae
Chloroplast genome
Chloroplasts
Epimedium
Epimedium sutchuenense
Genomes
Germplasm
infrageneric classification
Mitogenome Announcement
phylogenetic relationship
Phylogenetics
Phylogeny
rRNA
tRNA
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container_title Mitochondrial DNA. Part B. Resources
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Zhang, Yixin
Zhang, Cheng
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Guo, Baolin
description Epimedium L. is the largest herbaceous genus in the family Berberidaceae which comprises more than 60 species. Epimedium sutchuenense Franch. is narrowly inhabited in the Daba Mountains of China. In the current study, we assembled the first complete chloroplast genome of E. sutchuenense through Illumina paired-end sequencing. The complete chloroplast genome of E. sutchuenense was 157,218 bp in length and the total GC content was 38.78%. A total of 112 unique genes were identified, including 78 protein-coding genes, 30 tRNA genes and 4 rRNA genes. The phylogenetic analysis demonstrated that E. sutchuenense was sister to Epimedium wushanense T. S. Ying. Our results provided valuable information for further phylogenetic research and germplasm exploration of Epimedium genus.
doi_str_mv 10.1080/23802359.2021.1973923
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subjects Berberidaceae
Chloroplast genome
Chloroplasts
Epimedium
Epimedium sutchuenense
Genomes
Germplasm
infrageneric classification
Mitogenome Announcement
phylogenetic relationship
Phylogenetics
Phylogeny
rRNA
tRNA
title The complete chloroplast genome of Epimedium sutchuenense Franch. (Berberidaceae)
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