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The complete mitochondrial genomes of the flapper skate Dipturus intermedius and the longnose skate Dipturus oxyrinchus
We describe the complete mitochondrial genomes of the flapper skate Dipturus intermedius (Parnell 1837) and the longnose skate Dipturus oxyrinchus (Linnaeus 1758), which have been obtained by Sanger sequencing. We report the length of the sequences to be 16,906 and 16,911 bp, respectively. The lengt...
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Published in: | Mitochondrial DNA. Part B. Resources 2022, Vol.7 (5), p.897-899 |
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description | We describe the complete mitochondrial genomes of the flapper skate Dipturus intermedius (Parnell 1837) and the longnose skate Dipturus oxyrinchus (Linnaeus 1758), which have been obtained by Sanger sequencing. We report the length of the sequences to be 16,906 and 16,911 bp, respectively. The length and structure of gene regions, containing 13 protein-coding regions, 22 tRNA genes, two rRNA genes, and two non-coding areas, resemble those of related skate species. Despite D. intermedius being considered a cryptic species with D. batis, the full mitogenomes confirm that D. intermedius and D. oxyrinchus are more genetically similar. In comparison to other Dipturus species, D. intermedius is missing a whole codon in its cytochrome oxidase subunit 2 gene. These mitogenomes will be a useful resource furthering investigation of the population genetic differences and evolutionary history of skate species. |
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We report the length of the sequences to be 16,906 and 16,911 bp, respectively. The length and structure of gene regions, containing 13 protein-coding regions, 22 tRNA genes, two rRNA genes, and two non-coding areas, resemble those of related skate species. Despite D. intermedius being considered a cryptic species with D. batis, the full mitogenomes confirm that D. intermedius and D. oxyrinchus are more genetically similar. In comparison to other Dipturus species, D. intermedius is missing a whole codon in its cytochrome oxidase subunit 2 gene. These mitogenomes will be a useful resource furthering investigation of the population genetic differences and evolutionary history of skate species.</description><identifier>ISSN: 2380-2359</identifier><identifier>EISSN: 2380-2359</identifier><identifier>DOI: 10.1080/23802359.2022.2064248</identifier><identifier>PMID: 35692707</identifier><language>eng</language><publisher>England: Taylor & Francis</publisher><subject>common skate ; Cytochrome ; Dipturus batis ; Dipturus intermedius ; Dipturus oxyrinchus ; Endangered & extinct species ; Evolutionary genetics ; Fisheries ; flapper skate ; Genes ; Genomes ; Mitochondria ; Mitochondrial DNA ; mitogenome ; Mitogenome Announcement ; Phylogenetics ; Population genetics ; Raja rhina ; rRNA ; Science ; Species ; Taxonomy ; Transfer RNA ; tRNA</subject><ispartof>Mitochondrial DNA. Part B. Resources, 2022, Vol.7 (5), p.897-899</ispartof><rights>2022 The Author(s). 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Part B. Resources</title><addtitle>Mitochondrial DNA B Resour</addtitle><description>We describe the complete mitochondrial genomes of the flapper skate Dipturus intermedius (Parnell 1837) and the longnose skate Dipturus oxyrinchus (Linnaeus 1758), which have been obtained by Sanger sequencing. We report the length of the sequences to be 16,906 and 16,911 bp, respectively. The length and structure of gene regions, containing 13 protein-coding regions, 22 tRNA genes, two rRNA genes, and two non-coding areas, resemble those of related skate species. Despite D. intermedius being considered a cryptic species with D. batis, the full mitogenomes confirm that D. intermedius and D. oxyrinchus are more genetically similar. In comparison to other Dipturus species, D. intermedius is missing a whole codon in its cytochrome oxidase subunit 2 gene. These mitogenomes will be a useful resource furthering investigation of the population genetic differences and evolutionary history of skate species.</description><subject>common skate</subject><subject>Cytochrome</subject><subject>Dipturus batis</subject><subject>Dipturus intermedius</subject><subject>Dipturus oxyrinchus</subject><subject>Endangered & extinct species</subject><subject>Evolutionary genetics</subject><subject>Fisheries</subject><subject>flapper skate</subject><subject>Genes</subject><subject>Genomes</subject><subject>Mitochondria</subject><subject>Mitochondrial DNA</subject><subject>mitogenome</subject><subject>Mitogenome Announcement</subject><subject>Phylogenetics</subject><subject>Population genetics</subject><subject>Raja rhina</subject><subject>rRNA</subject><subject>Science</subject><subject>Species</subject><subject>Taxonomy</subject><subject>Transfer RNA</subject><subject>tRNA</subject><issn>2380-2359</issn><issn>2380-2359</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2022</creationdate><recordtype>article</recordtype><sourceid>0YH</sourceid><sourceid>PIMPY</sourceid><sourceid>DOA</sourceid><recordid>eNp9kk1v1DAQhiMEolXpTwBF4sJli79iJxcEKi1UqsSlnC3HGe96cexgO5T99zjdbdX2wMUeeZ55PTN6q-otRmcYtegjoS0itOnOCCKkHJwR1r6ojpf31ZJ4-Sg-qk5T2iKEMKdCdOJ1dUQb3hGBxHF1e7OBWodxcpChHm0OehP8EK1y9Rp8GCHVwdS5UMapaYJYp1-qoF_tlOc4p9r6DHGEwZZY-eEOdcGvfUjwnA1_d9F6vZnTm-qVUS7B6eE-qX5eXtycf19d__h2df7leqWZEG05e0wHLXqscAuEAMbQ9ZyVsYxSSDCONG4xGI6x6UtGA3SMCaM5ABs4Pamu9rpDUFs5RTuquJNBWXn3EOJaqpitdiD7nkPZCoDWigGoHnDPKcZMK4MHPBStT3utae7LwBp8jso9EX2a8XYj1-GP7LDglDVF4MNBIIbfM6QsR5s0OKc8hDlJwkXTtYLQpe_3z9BtmKMvq1oo0mDaUlqoZk_pGFKKYB6awUguTpH3TpGLU-TBKaXu3eNJHqrufVGAz3vAehPiqG5DdIPMaudCNFF5bZOk___jH0kE0Qk</recordid><startdate>2022</startdate><enddate>2022</enddate><creator>Schwanck, Tanja N.</creator><creator>Delaval, Aurelien N.</creator><creator>Noble, Leslie R.</creator><creator>Wright, Peter J.</creator><creator>Donnan, David W.</creator><creator>Jones, Catherine S.</creator><general>Taylor & Francis</general><general>Taylor & Francis Ltd</general><general>Taylor & Francis Group</general><scope>0YH</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7XB</scope><scope>8FD</scope><scope>8FK</scope><scope>8G5</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BENPR</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>GNUQQ</scope><scope>GUQSH</scope><scope>M2O</scope><scope>MBDVC</scope><scope>P64</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>Q9U</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope></search><sort><creationdate>2022</creationdate><title>The complete mitochondrial genomes of the flapper skate Dipturus intermedius and the longnose skate Dipturus oxyrinchus</title><author>Schwanck, Tanja N. ; 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subjects | common skate Cytochrome Dipturus batis Dipturus intermedius Dipturus oxyrinchus Endangered & extinct species Evolutionary genetics Fisheries flapper skate Genes Genomes Mitochondria Mitochondrial DNA mitogenome Mitogenome Announcement Phylogenetics Population genetics Raja rhina rRNA Science Species Taxonomy Transfer RNA tRNA |
title | The complete mitochondrial genomes of the flapper skate Dipturus intermedius and the longnose skate Dipturus oxyrinchus |
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