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Ectopic Expression of Arabidopsis thaliana zDof1.3 in Tomato ( Solanum lycopersicum L.) Is Associated with Improved Greenhouse Productivity and Enhanced Carbon and Nitrogen Use
A large collection of transgenic tomato lines, each ectopically expressing a different Arabidopsis thaliana transcription factor, was screened for variants with alterations in leaf starch. Such lines may be affected in carbon partitioning, and in allocation to the sinks. We focused on ‘L4080’, which...
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Published in: | International journal of molecular sciences 2022-09, Vol.23 (19), p.11229 |
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creator | Luengwilai, Kietsuda Yu, Jingwei Jiménez, Randi C Thitisaksakul, Maysaya Vega, Andrea Dong, Shaoyun Beckles, Diane M |
description | A large collection of transgenic tomato lines, each ectopically expressing a different Arabidopsis thaliana transcription factor, was screened for variants with alterations in leaf starch. Such lines may be affected in carbon partitioning, and in allocation to the sinks. We focused on ‘L4080’, which harbored an A. thaliana zDof (DNA-binding one zinc finger) isoform 1.3 (AtzDof1.3) gene, and which had a 2−4-fold higher starch-to-sucrose ratio in source leaves over the diel (p < 0.05). Our aim was to determine whether there were associated effects on productivity. L4080 plants were altered in nitrogen (N) and carbon (C) metabolism. The N-to-C ratio was higher in six-week-old L4080, and when treated with 1/10 N, L4080 growth was less inhibited compared to the wild-type and this was accompanied by faster root elongation (p < 0.05). The six-week-old L4080 acquired 42% more dry matter at 720 ppm CO2, compared to ambient CO2 (p < 0.05), while the wild-type (WT) remained unchanged. GC-MS-TOF data showed that L4080 source leaves were enriched in amino acids compared to the WT, and at 49 DPA, fruit had 25% greater mass, higher sucrose, and increased yield (25%; p < 0.05) compared to the WT. An Affymetrix cDNA array analysis suggested that only 0.39% of the 9000 cDNAs were altered by 1.5-fold (p < 0.01) in L4080 source leaves. 14C-labeling of fruit disks identified potential differences in 14-DPA fruit metabolism suggesting that post-transcriptional regulation was important. We conclude that AtzDof1.3 and the germplasm derived therefrom, should be investigated for their ‘climate-change adaptive’ potential. |
doi_str_mv | 10.3390/ijms231911229 |
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Is Associated with Improved Greenhouse Productivity and Enhanced Carbon and Nitrogen Use</title><source>PubMed (Medline)</source><source>Publicly Available Content Database</source><creator>Luengwilai, Kietsuda ; Yu, Jingwei ; Jiménez, Randi C ; Thitisaksakul, Maysaya ; Vega, Andrea ; Dong, Shaoyun ; Beckles, Diane M</creator><creatorcontrib>Luengwilai, Kietsuda ; Yu, Jingwei ; Jiménez, Randi C ; Thitisaksakul, Maysaya ; Vega, Andrea ; Dong, Shaoyun ; Beckles, Diane M</creatorcontrib><description>A large collection of transgenic tomato lines, each ectopically expressing a different Arabidopsis thaliana transcription factor, was screened for variants with alterations in leaf starch. Such lines may be affected in carbon partitioning, and in allocation to the sinks. We focused on ‘L4080’, which harbored an A. thaliana zDof (DNA-binding one zinc finger) isoform 1.3 (AtzDof1.3) gene, and which had a 2−4-fold higher starch-to-sucrose ratio in source leaves over the diel (p < 0.05). Our aim was to determine whether there were associated effects on productivity. L4080 plants were altered in nitrogen (N) and carbon (C) metabolism. The N-to-C ratio was higher in six-week-old L4080, and when treated with 1/10 N, L4080 growth was less inhibited compared to the wild-type and this was accompanied by faster root elongation (p < 0.05). The six-week-old L4080 acquired 42% more dry matter at 720 ppm CO2, compared to ambient CO2 (p < 0.05), while the wild-type (WT) remained unchanged. GC-MS-TOF data showed that L4080 source leaves were enriched in amino acids compared to the WT, and at 49 DPA, fruit had 25% greater mass, higher sucrose, and increased yield (25%; p < 0.05) compared to the WT. An Affymetrix cDNA array analysis suggested that only 0.39% of the 9000 cDNAs were altered by 1.5-fold (p < 0.01) in L4080 source leaves. 14C-labeling of fruit disks identified potential differences in 14-DPA fruit metabolism suggesting that post-transcriptional regulation was important. We conclude that AtzDof1.3 and the germplasm derived therefrom, should be investigated for their ‘climate-change adaptive’ potential.</description><identifier>ISSN: 1422-0067</identifier><identifier>ISSN: 1661-6596</identifier><identifier>EISSN: 1422-0067</identifier><identifier>DOI: 10.3390/ijms231911229</identifier><identifier>PMID: 36232530</identifier><language>eng</language><publisher>Switzerland: MDPI AG</publisher><subject>Agricultural production ; Amino Acids - metabolism ; Arabidopsis - metabolism ; Arabidopsis thaliana ; Carbohydrates ; Carbon ; Carbon - metabolism ; Carbon dioxide ; Carbon Dioxide - metabolism ; Cell division ; Climate change ; Disks ; DNA - metabolism ; DNA microarrays ; Dry matter ; Ectopic expression ; Ectopic Gene Expression ; Elongation ; Fruits ; Gene expression ; Gene Expression Regulation, Plant ; Gene regulation ; Genomics ; Germplasm ; Glucose ; Hypotheses ; Leaves ; Metabolism ; Nitrogen ; Nitrogen - metabolism ; Plant Leaves - genetics ; Plant Leaves - metabolism ; Plants, Genetically Modified - genetics ; Plants, Genetically Modified - metabolism ; Post-transcription ; Productivity ; Solanum lycopersicum ; Solanum lycopersicum - metabolism ; Starch - metabolism ; Sucrose ; Sucrose - metabolism ; Transcription factors ; Transcription Factors - genetics ; Transcription Factors - metabolism</subject><ispartof>International journal of molecular sciences, 2022-09, Vol.23 (19), p.11229</ispartof><rights>2022 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>2022 by the authors. 2022</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c415t-aedb6ee706a3535616dbec70cd692e2445bab3ba3511049088971a052537ca423</citedby><cites>FETCH-LOGICAL-c415t-aedb6ee706a3535616dbec70cd692e2445bab3ba3511049088971a052537ca423</cites><orcidid>0000-0001-6336-1186 ; 0000-0003-0841-5713 ; 0000-0003-1485-2610 ; 0000-0003-2418-8100 ; 0000-0002-8035-8656 ; 0000-0003-4268-436X</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.proquest.com/docview/2724283043/fulltextPDF?pq-origsite=primo$$EPDF$$P50$$Gproquest$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.proquest.com/docview/2724283043?pq-origsite=primo$$EHTML$$P50$$Gproquest$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,881,25731,27901,27902,36989,44566,53766,53768,74869</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/36232530$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Luengwilai, Kietsuda</creatorcontrib><creatorcontrib>Yu, Jingwei</creatorcontrib><creatorcontrib>Jiménez, Randi C</creatorcontrib><creatorcontrib>Thitisaksakul, Maysaya</creatorcontrib><creatorcontrib>Vega, Andrea</creatorcontrib><creatorcontrib>Dong, Shaoyun</creatorcontrib><creatorcontrib>Beckles, Diane M</creatorcontrib><title>Ectopic Expression of Arabidopsis thaliana zDof1.3 in Tomato ( Solanum lycopersicum L.) Is Associated with Improved Greenhouse Productivity and Enhanced Carbon and Nitrogen Use</title><title>International journal of molecular sciences</title><addtitle>Int J Mol Sci</addtitle><description>A large collection of transgenic tomato lines, each ectopically expressing a different Arabidopsis thaliana transcription factor, was screened for variants with alterations in leaf starch. Such lines may be affected in carbon partitioning, and in allocation to the sinks. We focused on ‘L4080’, which harbored an A. thaliana zDof (DNA-binding one zinc finger) isoform 1.3 (AtzDof1.3) gene, and which had a 2−4-fold higher starch-to-sucrose ratio in source leaves over the diel (p < 0.05). Our aim was to determine whether there were associated effects on productivity. L4080 plants were altered in nitrogen (N) and carbon (C) metabolism. The N-to-C ratio was higher in six-week-old L4080, and when treated with 1/10 N, L4080 growth was less inhibited compared to the wild-type and this was accompanied by faster root elongation (p < 0.05). The six-week-old L4080 acquired 42% more dry matter at 720 ppm CO2, compared to ambient CO2 (p < 0.05), while the wild-type (WT) remained unchanged. GC-MS-TOF data showed that L4080 source leaves were enriched in amino acids compared to the WT, and at 49 DPA, fruit had 25% greater mass, higher sucrose, and increased yield (25%; p < 0.05) compared to the WT. An Affymetrix cDNA array analysis suggested that only 0.39% of the 9000 cDNAs were altered by 1.5-fold (p < 0.01) in L4080 source leaves. 14C-labeling of fruit disks identified potential differences in 14-DPA fruit metabolism suggesting that post-transcriptional regulation was important. We conclude that AtzDof1.3 and the germplasm derived therefrom, should be investigated for their ‘climate-change adaptive’ potential.</description><subject>Agricultural production</subject><subject>Amino Acids - metabolism</subject><subject>Arabidopsis - metabolism</subject><subject>Arabidopsis thaliana</subject><subject>Carbohydrates</subject><subject>Carbon</subject><subject>Carbon - metabolism</subject><subject>Carbon dioxide</subject><subject>Carbon Dioxide - metabolism</subject><subject>Cell division</subject><subject>Climate change</subject><subject>Disks</subject><subject>DNA - metabolism</subject><subject>DNA microarrays</subject><subject>Dry matter</subject><subject>Ectopic expression</subject><subject>Ectopic Gene Expression</subject><subject>Elongation</subject><subject>Fruits</subject><subject>Gene expression</subject><subject>Gene Expression Regulation, Plant</subject><subject>Gene regulation</subject><subject>Genomics</subject><subject>Germplasm</subject><subject>Glucose</subject><subject>Hypotheses</subject><subject>Leaves</subject><subject>Metabolism</subject><subject>Nitrogen</subject><subject>Nitrogen - metabolism</subject><subject>Plant Leaves - genetics</subject><subject>Plant Leaves - metabolism</subject><subject>Plants, Genetically Modified - genetics</subject><subject>Plants, Genetically Modified - metabolism</subject><subject>Post-transcription</subject><subject>Productivity</subject><subject>Solanum lycopersicum</subject><subject>Solanum lycopersicum - metabolism</subject><subject>Starch - metabolism</subject><subject>Sucrose</subject><subject>Sucrose - metabolism</subject><subject>Transcription factors</subject><subject>Transcription Factors - genetics</subject><subject>Transcription Factors - metabolism</subject><issn>1422-0067</issn><issn>1661-6596</issn><issn>1422-0067</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2022</creationdate><recordtype>article</recordtype><sourceid>PIMPY</sourceid><recordid>eNpVkU1vEzEQhi0EoqVw5IoscYHDpv7Yj-wFKQqhjRRRJNqzNet1uo52PYvtDYRfxU_EUT_UnmbG8-j1q3kJec_ZTMqandvdEITkNedC1C_IKc-FyBgrq5dP-hPyJoQdY0KKon5NTmR57CQ7Jf9WOuJoNV39Gb0JwaKjuKULD41tcQw20NhBb8EB_fsVt3wmqXX0GgeISD_Rn9iDmwbaHzSOxger07CZfabrQBchoLYQTUt_29jR9TB63KfpwhvjOpyCoT88tpOOdm_jgYJr6cp14HSCluCbZOb49t1Gj7fG0Ztg3pJXW-iDeXdfz8jNt9X18jLbXF2sl4tNpnNexAxM25TGVKwEWcii5GXbGF0x3Za1MCLPiwYa2aQl5yyv2XxeVxxYka5SaciFPCNf7nTHqRlMq42LHno1ejuAPygEq55vnO3ULe5VXVSMFTwJfLwX8PhrMiGqHU7eJc9KVCIXc8lymajsjtIeQ_Bm-_gDZ-oYsHoWcOI_PLX1SD8kKv8DmfCkPQ</recordid><startdate>20220923</startdate><enddate>20220923</enddate><creator>Luengwilai, Kietsuda</creator><creator>Yu, Jingwei</creator><creator>Jiménez, Randi C</creator><creator>Thitisaksakul, Maysaya</creator><creator>Vega, Andrea</creator><creator>Dong, Shaoyun</creator><creator>Beckles, Diane M</creator><general>MDPI AG</general><general>MDPI</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>8G5</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BENPR</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>GUQSH</scope><scope>K9.</scope><scope>M0S</scope><scope>M1P</scope><scope>M2O</scope><scope>MBDVC</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>Q9U</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0001-6336-1186</orcidid><orcidid>https://orcid.org/0000-0003-0841-5713</orcidid><orcidid>https://orcid.org/0000-0003-1485-2610</orcidid><orcidid>https://orcid.org/0000-0003-2418-8100</orcidid><orcidid>https://orcid.org/0000-0002-8035-8656</orcidid><orcidid>https://orcid.org/0000-0003-4268-436X</orcidid></search><sort><creationdate>20220923</creationdate><title>Ectopic Expression of Arabidopsis thaliana zDof1.3 in Tomato ( Solanum lycopersicum L.) Is Associated with Improved Greenhouse Productivity and Enhanced Carbon and Nitrogen Use</title><author>Luengwilai, Kietsuda ; Yu, Jingwei ; Jiménez, Randi C ; Thitisaksakul, Maysaya ; Vega, Andrea ; Dong, Shaoyun ; Beckles, Diane M</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c415t-aedb6ee706a3535616dbec70cd692e2445bab3ba3511049088971a052537ca423</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2022</creationdate><topic>Agricultural production</topic><topic>Amino Acids - metabolism</topic><topic>Arabidopsis - metabolism</topic><topic>Arabidopsis thaliana</topic><topic>Carbohydrates</topic><topic>Carbon</topic><topic>Carbon - metabolism</topic><topic>Carbon dioxide</topic><topic>Carbon Dioxide - metabolism</topic><topic>Cell division</topic><topic>Climate change</topic><topic>Disks</topic><topic>DNA - metabolism</topic><topic>DNA microarrays</topic><topic>Dry matter</topic><topic>Ectopic expression</topic><topic>Ectopic Gene Expression</topic><topic>Elongation</topic><topic>Fruits</topic><topic>Gene expression</topic><topic>Gene Expression Regulation, Plant</topic><topic>Gene regulation</topic><topic>Genomics</topic><topic>Germplasm</topic><topic>Glucose</topic><topic>Hypotheses</topic><topic>Leaves</topic><topic>Metabolism</topic><topic>Nitrogen</topic><topic>Nitrogen - metabolism</topic><topic>Plant Leaves - genetics</topic><topic>Plant Leaves - metabolism</topic><topic>Plants, Genetically Modified - genetics</topic><topic>Plants, Genetically Modified - metabolism</topic><topic>Post-transcription</topic><topic>Productivity</topic><topic>Solanum lycopersicum</topic><topic>Solanum lycopersicum - metabolism</topic><topic>Starch - metabolism</topic><topic>Sucrose</topic><topic>Sucrose - metabolism</topic><topic>Transcription factors</topic><topic>Transcription Factors - genetics</topic><topic>Transcription Factors - metabolism</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Luengwilai, Kietsuda</creatorcontrib><creatorcontrib>Yu, Jingwei</creatorcontrib><creatorcontrib>Jiménez, Randi C</creatorcontrib><creatorcontrib>Thitisaksakul, Maysaya</creatorcontrib><creatorcontrib>Vega, Andrea</creatorcontrib><creatorcontrib>Dong, Shaoyun</creatorcontrib><creatorcontrib>Beckles, Diane M</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>Research Library (Alumni Edition)</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest Central</collection><collection>ProQuest Central Essentials</collection><collection>ProQuest Central</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>Research Library Prep</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Research Library</collection><collection>Research Library (Corporate)</collection><collection>Publicly Available Content Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>ProQuest Central Basic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>International journal of molecular sciences</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Luengwilai, Kietsuda</au><au>Yu, Jingwei</au><au>Jiménez, Randi C</au><au>Thitisaksakul, Maysaya</au><au>Vega, Andrea</au><au>Dong, Shaoyun</au><au>Beckles, Diane M</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Ectopic Expression of Arabidopsis thaliana zDof1.3 in Tomato ( Solanum lycopersicum L.) Is Associated with Improved Greenhouse Productivity and Enhanced Carbon and Nitrogen Use</atitle><jtitle>International journal of molecular sciences</jtitle><addtitle>Int J Mol Sci</addtitle><date>2022-09-23</date><risdate>2022</risdate><volume>23</volume><issue>19</issue><spage>11229</spage><pages>11229-</pages><issn>1422-0067</issn><issn>1661-6596</issn><eissn>1422-0067</eissn><abstract>A large collection of transgenic tomato lines, each ectopically expressing a different Arabidopsis thaliana transcription factor, was screened for variants with alterations in leaf starch. Such lines may be affected in carbon partitioning, and in allocation to the sinks. We focused on ‘L4080’, which harbored an A. thaliana zDof (DNA-binding one zinc finger) isoform 1.3 (AtzDof1.3) gene, and which had a 2−4-fold higher starch-to-sucrose ratio in source leaves over the diel (p < 0.05). Our aim was to determine whether there were associated effects on productivity. L4080 plants were altered in nitrogen (N) and carbon (C) metabolism. The N-to-C ratio was higher in six-week-old L4080, and when treated with 1/10 N, L4080 growth was less inhibited compared to the wild-type and this was accompanied by faster root elongation (p < 0.05). The six-week-old L4080 acquired 42% more dry matter at 720 ppm CO2, compared to ambient CO2 (p < 0.05), while the wild-type (WT) remained unchanged. GC-MS-TOF data showed that L4080 source leaves were enriched in amino acids compared to the WT, and at 49 DPA, fruit had 25% greater mass, higher sucrose, and increased yield (25%; p < 0.05) compared to the WT. An Affymetrix cDNA array analysis suggested that only 0.39% of the 9000 cDNAs were altered by 1.5-fold (p < 0.01) in L4080 source leaves. 14C-labeling of fruit disks identified potential differences in 14-DPA fruit metabolism suggesting that post-transcriptional regulation was important. 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subjects | Agricultural production Amino Acids - metabolism Arabidopsis - metabolism Arabidopsis thaliana Carbohydrates Carbon Carbon - metabolism Carbon dioxide Carbon Dioxide - metabolism Cell division Climate change Disks DNA - metabolism DNA microarrays Dry matter Ectopic expression Ectopic Gene Expression Elongation Fruits Gene expression Gene Expression Regulation, Plant Gene regulation Genomics Germplasm Glucose Hypotheses Leaves Metabolism Nitrogen Nitrogen - metabolism Plant Leaves - genetics Plant Leaves - metabolism Plants, Genetically Modified - genetics Plants, Genetically Modified - metabolism Post-transcription Productivity Solanum lycopersicum Solanum lycopersicum - metabolism Starch - metabolism Sucrose Sucrose - metabolism Transcription factors Transcription Factors - genetics Transcription Factors - metabolism |
title | Ectopic Expression of Arabidopsis thaliana zDof1.3 in Tomato ( Solanum lycopersicum L.) Is Associated with Improved Greenhouse Productivity and Enhanced Carbon and Nitrogen Use |
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