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Exploring the potential mechanisms of impairment on genitourinary system associated with coronavirus disease 2019 infection: Bioinformatics and molecular simulation analyses
Objective: The novel coronavirus (severe acute respiratory syndrome coronavirus 2) has been spreading worldwide since December 2019, posing a serious danger to human health and socioeconomic development. A large number of clinical trials have revealed that coronavirus disease 2019 (COVID-19) results...
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Published in: | Asian Journal of Urology 2023-07, Vol.10 (3), p.344-355 |
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creator | Zhao, Kai Zhang, Dong Xu, Xinchi Wang, Shangqian Liu, Zhanpeng Ren, Xiaohan Zhang, Xu Lu, Zhongwen Ren, Shancheng Qin, Chao |
description | Objective: The novel coronavirus (severe acute respiratory syndrome coronavirus 2) has been spreading worldwide since December 2019, posing a serious danger to human health and socioeconomic development. A large number of clinical trials have revealed that coronavirus disease 2019 (COVID-19) results in multi-organ damage including the urogenital system. This study aimed to explore the potential mechanisms of genitourinary damage associated with COVID-19 infection through bioinformatics and molecular simulation analysis. Methods: We used multiple publicly available databases to explore the expression patterns of angiotensin-converting enzyme 2 (ACE2), transmembrane serine protease 2 (TMPRSS2), and CD147 in major organs in the healthy and disease-specific populations, particularly the genitourinary organs. Single-cell RNA sequencing was used to analyze the cell-specific expression patterns of ACE2, TMPRSS2, CD147, cytokine receptors, and cytokine interacting proteins in genitourinary organs, such as the bladder, kidney, prostate, and testis. Additionally, gene set enrichment analysis was used to investigate the relationship between testosterone levels and COVID-19 vulnerability in patients with prostate cancer. Results: The results revealed that ACE2, TMPRSS2, and CD147 were highly expressed in normal urogenital organs. Then, they were also highly expressed in multiple tumors and chronic kidney diseases. Additionally, ACE2, TMPRSS2, and CD147 were significantly expressed in a range of cells in urogenital organs according to single-cell RNA sequencing. Cytokine receptors and cytokine interacting proteins, especially CCL2, JUN, and TIMP1, were commonly highly expressed in urogenital organs. Finally, gene set enrichment analysis results showed that high testosterone levels in prostate cancer patients were significantly related to the JAK-STAT signaling pathway and the Toll-like receptor signaling pathway which were associated with COVID-19. Conclusion: Our study provides new insights into the potential mechanisms of severe acute respiratory syndrome coronavirus 2 damage to urogenital organs from multiple perspectives, which may draw the attention of urologists to COVID-19 and contribute to the development of targeted drugs. |
doi_str_mv | 10.1016/j.ajur.2022.12.004 |
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A large number of clinical trials have revealed that coronavirus disease 2019 (COVID-19) results in multi-organ damage including the urogenital system. This study aimed to explore the potential mechanisms of genitourinary damage associated with COVID-19 infection through bioinformatics and molecular simulation analysis. Methods: We used multiple publicly available databases to explore the expression patterns of angiotensin-converting enzyme 2 (ACE2), transmembrane serine protease 2 (TMPRSS2), and CD147 in major organs in the healthy and disease-specific populations, particularly the genitourinary organs. Single-cell RNA sequencing was used to analyze the cell-specific expression patterns of ACE2, TMPRSS2, CD147, cytokine receptors, and cytokine interacting proteins in genitourinary organs, such as the bladder, kidney, prostate, and testis. Additionally, gene set enrichment analysis was used to investigate the relationship between testosterone levels and COVID-19 vulnerability in patients with prostate cancer. Results: The results revealed that ACE2, TMPRSS2, and CD147 were highly expressed in normal urogenital organs. Then, they were also highly expressed in multiple tumors and chronic kidney diseases. Additionally, ACE2, TMPRSS2, and CD147 were significantly expressed in a range of cells in urogenital organs according to single-cell RNA sequencing. Cytokine receptors and cytokine interacting proteins, especially CCL2, JUN, and TIMP1, were commonly highly expressed in urogenital organs. Finally, gene set enrichment analysis results showed that high testosterone levels in prostate cancer patients were significantly related to the JAK-STAT signaling pathway and the Toll-like receptor signaling pathway which were associated with COVID-19. Conclusion: Our study provides new insights into the potential mechanisms of severe acute respiratory syndrome coronavirus 2 damage to urogenital organs from multiple perspectives, which may draw the attention of urologists to COVID-19 and contribute to the development of targeted drugs.</description><identifier>ISSN: 2214-3882</identifier><identifier>EISSN: 2214-3890</identifier><identifier>DOI: 10.1016/j.ajur.2022.12.004</identifier><language>eng</language><publisher>Editorial Office of Asian Journal of Urology. Production and hosting by Elsevier B.V</publisher><subject>Angiotensin-converting enzyme 2 ; CD147 ; Coronavirus disease 2019 ; Genitourinary organ ; Original ; Severe acute respiratory syndrome coronavirus 2 ; Transmembrane serine protease 2</subject><ispartof>Asian Journal of Urology, 2023-07, Vol.10 (3), p.344-355</ispartof><rights>2023 Editorial Office of Asian Journal of Urology. Production and hosting by Elsevier B.V. 2023 Editorial Office of Asian Journal of Urology</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC9902342/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC9902342/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,885,27924,27925,53791,53793</link.rule.ids></links><search><creatorcontrib>Zhao, Kai</creatorcontrib><creatorcontrib>Zhang, Dong</creatorcontrib><creatorcontrib>Xu, Xinchi</creatorcontrib><creatorcontrib>Wang, Shangqian</creatorcontrib><creatorcontrib>Liu, Zhanpeng</creatorcontrib><creatorcontrib>Ren, Xiaohan</creatorcontrib><creatorcontrib>Zhang, Xu</creatorcontrib><creatorcontrib>Lu, Zhongwen</creatorcontrib><creatorcontrib>Ren, Shancheng</creatorcontrib><creatorcontrib>Qin, Chao</creatorcontrib><title>Exploring the potential mechanisms of impairment on genitourinary system associated with coronavirus disease 2019 infection: Bioinformatics and molecular simulation analyses</title><title>Asian Journal of Urology</title><description>Objective: The novel coronavirus (severe acute respiratory syndrome coronavirus 2) has been spreading worldwide since December 2019, posing a serious danger to human health and socioeconomic development. A large number of clinical trials have revealed that coronavirus disease 2019 (COVID-19) results in multi-organ damage including the urogenital system. This study aimed to explore the potential mechanisms of genitourinary damage associated with COVID-19 infection through bioinformatics and molecular simulation analysis. Methods: We used multiple publicly available databases to explore the expression patterns of angiotensin-converting enzyme 2 (ACE2), transmembrane serine protease 2 (TMPRSS2), and CD147 in major organs in the healthy and disease-specific populations, particularly the genitourinary organs. Single-cell RNA sequencing was used to analyze the cell-specific expression patterns of ACE2, TMPRSS2, CD147, cytokine receptors, and cytokine interacting proteins in genitourinary organs, such as the bladder, kidney, prostate, and testis. Additionally, gene set enrichment analysis was used to investigate the relationship between testosterone levels and COVID-19 vulnerability in patients with prostate cancer. Results: The results revealed that ACE2, TMPRSS2, and CD147 were highly expressed in normal urogenital organs. Then, they were also highly expressed in multiple tumors and chronic kidney diseases. Additionally, ACE2, TMPRSS2, and CD147 were significantly expressed in a range of cells in urogenital organs according to single-cell RNA sequencing. Cytokine receptors and cytokine interacting proteins, especially CCL2, JUN, and TIMP1, were commonly highly expressed in urogenital organs. Finally, gene set enrichment analysis results showed that high testosterone levels in prostate cancer patients were significantly related to the JAK-STAT signaling pathway and the Toll-like receptor signaling pathway which were associated with COVID-19. Conclusion: Our study provides new insights into the potential mechanisms of severe acute respiratory syndrome coronavirus 2 damage to urogenital organs from multiple perspectives, which may draw the attention of urologists to COVID-19 and contribute to the development of targeted drugs.</description><subject>Angiotensin-converting enzyme 2</subject><subject>CD147</subject><subject>Coronavirus disease 2019</subject><subject>Genitourinary organ</subject><subject>Original</subject><subject>Severe acute respiratory syndrome coronavirus 2</subject><subject>Transmembrane serine protease 2</subject><issn>2214-3882</issn><issn>2214-3890</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2023</creationdate><recordtype>article</recordtype><sourceid>DOA</sourceid><recordid>eNpVkMtq3TAQhk1pISHJC2SlFziurrbVRaENaRIIZNOuzVgenaODJRlJTnsequ9YNSmFrObyz3zMP01zzWjLKOs-Hls4bqnllPOW8ZZS-a4555zJnRg0ff8_H_hZc5XzkVLKei2UZufN79tf6xKTC3tSDkjWWDAUBwvxaA4QXPaZREucX8ElXzUSA9ljcCVudQvSieRTLugJ5ByNg4Iz-enKgZiYYoBnl7ZMZpcRMhJOmSYuWDTFxfCJfHWxVjF5KM5kAmEmPi5otgUSyc7X-HewCrCcMubL5oOFJePVv3jR_Ph2-_3mfvf4dPdw8-VxZ2TPy84KrS3rFJ2qx55xibPq-1l1GufByqkT1k4oLFVWGys6g4xbOkk12KEzWoiL5uGVO0c4jmtyvhodI7jxpRHTfoRUT15w7C1MXInJsI5KzXut1EDlbLRGoew0VNbnV9a6TR5nU3-YYHkDfasEdxj38XnUmnIhufgDZ_ObkQ</recordid><startdate>20230701</startdate><enddate>20230701</enddate><creator>Zhao, Kai</creator><creator>Zhang, Dong</creator><creator>Xu, Xinchi</creator><creator>Wang, Shangqian</creator><creator>Liu, Zhanpeng</creator><creator>Ren, Xiaohan</creator><creator>Zhang, Xu</creator><creator>Lu, Zhongwen</creator><creator>Ren, Shancheng</creator><creator>Qin, Chao</creator><general>Editorial Office of Asian Journal of Urology. Production and hosting by Elsevier B.V</general><general>Elsevier</general><scope>5PM</scope><scope>DOA</scope></search><sort><creationdate>20230701</creationdate><title>Exploring the potential mechanisms of impairment on genitourinary system associated with coronavirus disease 2019 infection: Bioinformatics and molecular simulation analyses</title><author>Zhao, Kai ; Zhang, Dong ; Xu, Xinchi ; Wang, Shangqian ; Liu, Zhanpeng ; Ren, Xiaohan ; Zhang, Xu ; Lu, Zhongwen ; Ren, Shancheng ; Qin, Chao</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c472t-f399f1650b5917124ed577d569ed8f4b63ffbe3f05f9cf36ce12f0b458f86c933</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2023</creationdate><topic>Angiotensin-converting enzyme 2</topic><topic>CD147</topic><topic>Coronavirus disease 2019</topic><topic>Genitourinary organ</topic><topic>Original</topic><topic>Severe acute respiratory syndrome coronavirus 2</topic><topic>Transmembrane serine protease 2</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Zhao, Kai</creatorcontrib><creatorcontrib>Zhang, Dong</creatorcontrib><creatorcontrib>Xu, Xinchi</creatorcontrib><creatorcontrib>Wang, Shangqian</creatorcontrib><creatorcontrib>Liu, Zhanpeng</creatorcontrib><creatorcontrib>Ren, Xiaohan</creatorcontrib><creatorcontrib>Zhang, Xu</creatorcontrib><creatorcontrib>Lu, Zhongwen</creatorcontrib><creatorcontrib>Ren, Shancheng</creatorcontrib><creatorcontrib>Qin, Chao</creatorcontrib><collection>PubMed Central (Full Participant titles)</collection><collection>Directory of Open Access Journals</collection><jtitle>Asian Journal of Urology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Zhao, Kai</au><au>Zhang, Dong</au><au>Xu, Xinchi</au><au>Wang, Shangqian</au><au>Liu, Zhanpeng</au><au>Ren, Xiaohan</au><au>Zhang, Xu</au><au>Lu, Zhongwen</au><au>Ren, Shancheng</au><au>Qin, Chao</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Exploring the potential mechanisms of impairment on genitourinary system associated with coronavirus disease 2019 infection: Bioinformatics and molecular simulation analyses</atitle><jtitle>Asian Journal of Urology</jtitle><date>2023-07-01</date><risdate>2023</risdate><volume>10</volume><issue>3</issue><spage>344</spage><epage>355</epage><pages>344-355</pages><issn>2214-3882</issn><eissn>2214-3890</eissn><abstract>Objective: The novel coronavirus (severe acute respiratory syndrome coronavirus 2) has been spreading worldwide since December 2019, posing a serious danger to human health and socioeconomic development. A large number of clinical trials have revealed that coronavirus disease 2019 (COVID-19) results in multi-organ damage including the urogenital system. This study aimed to explore the potential mechanisms of genitourinary damage associated with COVID-19 infection through bioinformatics and molecular simulation analysis. Methods: We used multiple publicly available databases to explore the expression patterns of angiotensin-converting enzyme 2 (ACE2), transmembrane serine protease 2 (TMPRSS2), and CD147 in major organs in the healthy and disease-specific populations, particularly the genitourinary organs. Single-cell RNA sequencing was used to analyze the cell-specific expression patterns of ACE2, TMPRSS2, CD147, cytokine receptors, and cytokine interacting proteins in genitourinary organs, such as the bladder, kidney, prostate, and testis. Additionally, gene set enrichment analysis was used to investigate the relationship between testosterone levels and COVID-19 vulnerability in patients with prostate cancer. Results: The results revealed that ACE2, TMPRSS2, and CD147 were highly expressed in normal urogenital organs. Then, they were also highly expressed in multiple tumors and chronic kidney diseases. Additionally, ACE2, TMPRSS2, and CD147 were significantly expressed in a range of cells in urogenital organs according to single-cell RNA sequencing. Cytokine receptors and cytokine interacting proteins, especially CCL2, JUN, and TIMP1, were commonly highly expressed in urogenital organs. Finally, gene set enrichment analysis results showed that high testosterone levels in prostate cancer patients were significantly related to the JAK-STAT signaling pathway and the Toll-like receptor signaling pathway which were associated with COVID-19. Conclusion: Our study provides new insights into the potential mechanisms of severe acute respiratory syndrome coronavirus 2 damage to urogenital organs from multiple perspectives, which may draw the attention of urologists to COVID-19 and contribute to the development of targeted drugs.</abstract><pub>Editorial Office of Asian Journal of Urology. Production and hosting by Elsevier B.V</pub><doi>10.1016/j.ajur.2022.12.004</doi><tpages>12</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Angiotensin-converting enzyme 2 CD147 Coronavirus disease 2019 Genitourinary organ Original Severe acute respiratory syndrome coronavirus 2 Transmembrane serine protease 2 |
title | Exploring the potential mechanisms of impairment on genitourinary system associated with coronavirus disease 2019 infection: Bioinformatics and molecular simulation analyses |
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