The Determination, Monitoring, Molecular Mechanisms and Formation of Biofilm in E. coli

• Published in: Brazilian journal of microbiology 2023-03, Vol.54 (1), p.259-277
• Main Authors: Öztürk, Fırat Yavuz, Darcan, Cihan, Kariptaş, Ergin
• Format: Article
• Language: English
• Subjects: Antiinfectives and antibacterials; Antimicrobial activity; Bacteria; Biochemical fuel cells; Biofilms; Biomedical and Life Sciences; Bioremediation; E coli; Environmental conditions; Environmental Microbiology - Review; Escherichia coli - genetics; Exopolysaccharides; Food Microbiology; Fuel technology; Gene expression; Health problems; Health risks; Life Sciences; Medical Microbiology; Microbial Ecology; Microbial Genetics and Genomics; Microbiology; Microorganisms; Molecular modelling; Mycology; Quorum Sensing; Water treatment; Water treatment plants
• ISSN: 1517-8382; 1678-4405
• DOI: 10.1007/s42770-022-00895-y

Biofilms are cell assemblies embedded in an exopolysaccharide matrix formed by microorganisms of a single or many different species. This matrix in which they are embedded protects the bacteria from external influences and antimicrobial effects. The biofilm structure that microorganisms form to protect themselves from harsh environmental conditions and survive is found in nature in many different environments. These environments where biofilm formation occurs have in common that they are in contact with fluids. The gene expression of bacteria in complex biofilm differs from that of bacteria in the planktonic state. The differences in biofilm cell expression are one of the effects of community life. Means of quorum sensing, bacteria can act in coordination with each other. At the same time, while biofilm formation provides many benefits to bacteria, it has positive and negative effects in many different areas. Depending on where they occur, biofilms can cause serious health problems, contamination risks, corrosion, and heat and efficiency losses. However, they can also be used in water treatment plants, bioremediation, and energy production with microbial fuel cells. In this review, the basic steps of biofilm formation and biofilm regulation in the model organism Escherichia coli were discussed. Finally, the methods by which biofilm formation can be detected and monitored were briefly discussed.