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Hepatitis B virus genotyping among chronic hepatitis B patients with resistance to treatment with lamivudine in the City of Ribeirão Preto, State of São Paulo
Lamivudine is a nucleoside analogue that is used clinically for treating chronic hepatitis B infection. However, the main problem with prolonged use of lamivudine is the development of viral resistance to the treatment. Mutations in the YMDD motif of the hepatitis B virus DNA polymerase gene have be...
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Published in: | Revista da Sociedade Brasileira de Medicina Tropical 2010-05, Vol.43 (3), p.224-228 |
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description | Lamivudine is a nucleoside analogue that is used clinically for treating chronic hepatitis B infection. However, the main problem with prolonged use of lamivudine is the development of viral resistance to the treatment. Mutations in the YMDD motif of the hepatitis B virus DNA polymerase gene have been associated with resistance to drug therapy. So far, there have not been many studies in Brazil reporting on genotype-dependent development of resistance to lamivudine. Thus, the aim of the present study was to determine the possible correlation between a certain genotype and increased development of resistance to lamivudine among chronic hepatitis B patients.
HBV DNA in samples from 50 patients under lamivudine treatment was amplified by means of conventional PCR. Samples were collected at Hospital das Clínicas, FMRP-USP. The products were then sequenced and phylogenetic analysis was performed.
Phylogenetic analysis revealed that 29 (58%) patients were infected with genotype D, 20 (40%) with genotype A and one (2%) with genotype F. Mutations in the YMDD motif occurred in 20% of the patients with genotype A and 27.6% of the patients with genotype D.
Despite the small number of samples, our results indicated that mutations in the YMDD motif were 1.38 times more frequent in genotype D than in genotype A. |
doi_str_mv | 10.1590/S0037-86822010000300002 |
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HBV DNA in samples from 50 patients under lamivudine treatment was amplified by means of conventional PCR. Samples were collected at Hospital das Clínicas, FMRP-USP. The products were then sequenced and phylogenetic analysis was performed.
Phylogenetic analysis revealed that 29 (58%) patients were infected with genotype D, 20 (40%) with genotype A and one (2%) with genotype F. Mutations in the YMDD motif occurred in 20% of the patients with genotype A and 27.6% of the patients with genotype D.
Despite the small number of samples, our results indicated that mutations in the YMDD motif were 1.38 times more frequent in genotype D than in genotype A.</description><identifier>ISSN: 0037-8682</identifier><identifier>ISSN: 1678-9849</identifier><identifier>EISSN: 1678-9849</identifier><identifier>EISSN: 0037-8682</identifier><identifier>DOI: 10.1590/S0037-86822010000300002</identifier><identifier>PMID: 20563485</identifier><language>eng</language><publisher>Brazil: Sociedade Brasileira de Medicina Tropical</publisher><subject>Antiviral Agents - therapeutic use ; Base Sequence ; Deoxyribonucleic acid ; DNA ; DNA, Viral - genetics ; Drug Resistance, Viral - genetics ; Genotype ; Hepatitis ; Hepatitis B ; Hepatitis B virus - drug effects ; Hepatitis B virus - genetics ; Hepatitis B, Chronic - drug therapy ; Hepatitis B, Chronic - virology ; Humans ; Lamivudine - therapeutic use ; Molecular Sequence Data ; Mutation ; Mutation - genetics ; Phylogeny ; TROPICAL MEDICINE</subject><ispartof>Revista da Sociedade Brasileira de Medicina Tropical, 2010-05, Vol.43 (3), p.224-228</ispartof><rights>Copyright Sociedade Brasileira de Medicina Tropical May/Jun 2010</rights><rights>This work is licensed under a Creative Commons Attribution-NonCommercial 4.0 International License.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c358t-a37b4b3885762a281981d97e88bc65a5b07f04ee75cd5cd0ea266b8fb90c1c1b3</citedby><cites>FETCH-LOGICAL-c358t-a37b4b3885762a281981d97e88bc65a5b07f04ee75cd5cd0ea266b8fb90c1c1b3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.proquest.com/docview/1449160644/fulltextPDF?pq-origsite=primo$$EPDF$$P50$$Gproquest$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.proquest.com/docview/1449160644?pq-origsite=primo$$EHTML$$P50$$Gproquest$$Hfree_for_read</linktohtml><link.rule.ids>230,314,776,780,881,24129,25731,27901,27902,36989,36990,44566,74869</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/20563485$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Haddad, Rodrigo</creatorcontrib><creatorcontrib>Martinelli, Ana de Lourdes Candolo</creatorcontrib><creatorcontrib>Uyemura, Sérgio Akira</creatorcontrib><creatorcontrib>Yokosawa, Jonny</creatorcontrib><title>Hepatitis B virus genotyping among chronic hepatitis B patients with resistance to treatment with lamivudine in the City of Ribeirão Preto, State of São Paulo</title><title>Revista da Sociedade Brasileira de Medicina Tropical</title><addtitle>Rev Soc Bras Med Trop</addtitle><description>Lamivudine is a nucleoside analogue that is used clinically for treating chronic hepatitis B infection. However, the main problem with prolonged use of lamivudine is the development of viral resistance to the treatment. Mutations in the YMDD motif of the hepatitis B virus DNA polymerase gene have been associated with resistance to drug therapy. So far, there have not been many studies in Brazil reporting on genotype-dependent development of resistance to lamivudine. Thus, the aim of the present study was to determine the possible correlation between a certain genotype and increased development of resistance to lamivudine among chronic hepatitis B patients.
HBV DNA in samples from 50 patients under lamivudine treatment was amplified by means of conventional PCR. Samples were collected at Hospital das Clínicas, FMRP-USP. The products were then sequenced and phylogenetic analysis was performed.
Phylogenetic analysis revealed that 29 (58%) patients were infected with genotype D, 20 (40%) with genotype A and one (2%) with genotype F. Mutations in the YMDD motif occurred in 20% of the patients with genotype A and 27.6% of the patients with genotype D.
Despite the small number of samples, our results indicated that mutations in the YMDD motif were 1.38 times more frequent in genotype D than in genotype A.</description><subject>Antiviral Agents - therapeutic use</subject><subject>Base Sequence</subject><subject>Deoxyribonucleic acid</subject><subject>DNA</subject><subject>DNA, Viral - genetics</subject><subject>Drug Resistance, Viral - genetics</subject><subject>Genotype</subject><subject>Hepatitis</subject><subject>Hepatitis B</subject><subject>Hepatitis B virus - drug effects</subject><subject>Hepatitis B virus - genetics</subject><subject>Hepatitis B, Chronic - drug therapy</subject><subject>Hepatitis B, Chronic - virology</subject><subject>Humans</subject><subject>Lamivudine - therapeutic use</subject><subject>Molecular Sequence Data</subject><subject>Mutation</subject><subject>Mutation - genetics</subject><subject>Phylogeny</subject><subject>TROPICAL MEDICINE</subject><issn>0037-8682</issn><issn>1678-9849</issn><issn>1678-9849</issn><issn>0037-8682</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2010</creationdate><recordtype>article</recordtype><sourceid>PIMPY</sourceid><recordid>eNp9Ud1qFDEUDmKx6-oraMALb5yan5kkc2kX-wMFxdXrIcme6abMJGuSqezbCH0UX8xst11EwUM4Cfl-Er6D0GtKTmjTkvdLQrislFCMEUpK8V1jT9CMCqmqVtXtUzQ7kI7R85RuCkHylj1Dx4w0gteqmaGfF7DR2WWX8Cm-dXFK-Bp8yNuN89dYj6F0u47BO4vXf1B3J_A54R8ur3GE5FLW3gLOAecIOo8F3YODHt3ttHIesPM4rwEvXN7i0OMvzoCLv-4C_hwhh3d4mXWGHbK8v9TTEF6go14PCV4-7HP07ezj18VFdfXp_HLx4aqyvFG50lya2nClGimYZoq2iq5aCUoZKxrdGCJ7UgPIxq7KIqCZEEb1piWWWmr4HJ3sfZN1MITuJkzRlwe7-6i7f6Iugrd7wSaG7xOk3I0uWRgG7SFMqZO8FJMl8jl68xfzYE7ruqWCiLouLLln2RhSitB3m-hGHbcdJd1u6P_5yasH_8mMsDroHqfMfwMz-6fe</recordid><startdate>20100501</startdate><enddate>20100501</enddate><creator>Haddad, Rodrigo</creator><creator>Martinelli, Ana de Lourdes Candolo</creator><creator>Uyemura, Sérgio Akira</creator><creator>Yokosawa, Jonny</creator><general>Sociedade Brasileira de Medicina Tropical</general><general>Sociedade Brasileira de Medicina Tropical - 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Academic</collection><collection>SciELO</collection><jtitle>Revista da Sociedade Brasileira de Medicina Tropical</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Haddad, Rodrigo</au><au>Martinelli, Ana de Lourdes Candolo</au><au>Uyemura, Sérgio Akira</au><au>Yokosawa, Jonny</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Hepatitis B virus genotyping among chronic hepatitis B patients with resistance to treatment with lamivudine in the City of Ribeirão Preto, State of São Paulo</atitle><jtitle>Revista da Sociedade Brasileira de Medicina Tropical</jtitle><addtitle>Rev Soc Bras Med Trop</addtitle><date>2010-05-01</date><risdate>2010</risdate><volume>43</volume><issue>3</issue><spage>224</spage><epage>228</epage><pages>224-228</pages><issn>0037-8682</issn><issn>1678-9849</issn><eissn>1678-9849</eissn><eissn>0037-8682</eissn><abstract>Lamivudine is a nucleoside analogue that is used clinically for treating chronic hepatitis B infection. However, the main problem with prolonged use of lamivudine is the development of viral resistance to the treatment. Mutations in the YMDD motif of the hepatitis B virus DNA polymerase gene have been associated with resistance to drug therapy. So far, there have not been many studies in Brazil reporting on genotype-dependent development of resistance to lamivudine. Thus, the aim of the present study was to determine the possible correlation between a certain genotype and increased development of resistance to lamivudine among chronic hepatitis B patients.
HBV DNA in samples from 50 patients under lamivudine treatment was amplified by means of conventional PCR. Samples were collected at Hospital das Clínicas, FMRP-USP. The products were then sequenced and phylogenetic analysis was performed.
Phylogenetic analysis revealed that 29 (58%) patients were infected with genotype D, 20 (40%) with genotype A and one (2%) with genotype F. Mutations in the YMDD motif occurred in 20% of the patients with genotype A and 27.6% of the patients with genotype D.
Despite the small number of samples, our results indicated that mutations in the YMDD motif were 1.38 times more frequent in genotype D than in genotype A.</abstract><cop>Brazil</cop><pub>Sociedade Brasileira de Medicina Tropical</pub><pmid>20563485</pmid><doi>10.1590/S0037-86822010000300002</doi><tpages>5</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Antiviral Agents - therapeutic use Base Sequence Deoxyribonucleic acid DNA DNA, Viral - genetics Drug Resistance, Viral - genetics Genotype Hepatitis Hepatitis B Hepatitis B virus - drug effects Hepatitis B virus - genetics Hepatitis B, Chronic - drug therapy Hepatitis B, Chronic - virology Humans Lamivudine - therapeutic use Molecular Sequence Data Mutation Mutation - genetics Phylogeny TROPICAL MEDICINE |
title | Hepatitis B virus genotyping among chronic hepatitis B patients with resistance to treatment with lamivudine in the City of Ribeirão Preto, State of São Paulo |
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