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Among‐year variation in selection during early life stages and the genetic basis of fitness in Arabidopsis thaliana
Incomplete information regarding both selection regimes and the genetic basis of fitness limits our understanding of adaptive evolution. Among‐year variation in the genetic basis of fitness is rarely quantified, and estimates of selection are typically based on single components of fitness, thus pot...
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Published in: | Molecular ecology 2018-06, Vol.27 (11), p.2498-2511 |
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description | Incomplete information regarding both selection regimes and the genetic basis of fitness limits our understanding of adaptive evolution. Among‐year variation in the genetic basis of fitness is rarely quantified, and estimates of selection are typically based on single components of fitness, thus potentially missing conflicting selection acting during other life‐history stages. Here, we examined among‐year variation in selection on a key life‐history trait and the genetic basis of fitness covering the whole life cycle in the annual plant Arabidopsis thaliana. We planted freshly matured seeds of >200 recombinant inbred lines (RILs) derived from a cross between two locally adapted populations (Italy and Sweden), and both parental genotypes at the native site of the Swedish population in three consecutive years. We quantified selection against the nonlocal Italian genotype, mapped quantitative trait loci (QTL) for fitness and its components, and quantified selection on timing of germination during different life stages. In all 3 years, the local Swedish genotype outperformed the nonlocal Italian genotype. However, both the contribution of early life stages to relative fitness, and the effects of fitness QTL varied among years. Timing of germination was under conflicting selection through seedling establishment vs. adult survival and fecundity, and both the direction and magnitude of net selection varied among years. Our results demonstrate that selection during early life stages and the genetic basis of fitness can vary markedly among years, emphasizing the need for multiyear studies considering the whole life cycle for a full understanding of natural selection and mechanisms maintaining local adaptation. |
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Among‐year variation in the genetic basis of fitness is rarely quantified, and estimates of selection are typically based on single components of fitness, thus potentially missing conflicting selection acting during other life‐history stages. Here, we examined among‐year variation in selection on a key life‐history trait and the genetic basis of fitness covering the whole life cycle in the annual plant Arabidopsis thaliana. We planted freshly matured seeds of >200 recombinant inbred lines (RILs) derived from a cross between two locally adapted populations (Italy and Sweden), and both parental genotypes at the native site of the Swedish population in three consecutive years. We quantified selection against the nonlocal Italian genotype, mapped quantitative trait loci (QTL) for fitness and its components, and quantified selection on timing of germination during different life stages. In all 3 years, the local Swedish genotype outperformed the nonlocal Italian genotype. However, both the contribution of early life stages to relative fitness, and the effects of fitness QTL varied among years. Timing of germination was under conflicting selection through seedling establishment vs. adult survival and fecundity, and both the direction and magnitude of net selection varied among years. Our results demonstrate that selection during early life stages and the genetic basis of fitness can vary markedly among years, emphasizing the need for multiyear studies considering the whole life cycle for a full understanding of natural selection and mechanisms maintaining local adaptation.</description><identifier>ISSN: 0962-1083</identifier><identifier>ISSN: 1365-294X</identifier><identifier>EISSN: 1365-294X</identifier><identifier>DOI: 10.1111/mec.14697</identifier><identifier>PMID: 29676059</identifier><language>eng</language><publisher>England: Blackwell Publishing Ltd</publisher><subject>adaptation ; Arabidopsis thaliana ; Biological evolution ; conflicting selection ; Evolution & development ; Fecundity ; Fitness ; Genetic diversity ; Genotype & phenotype ; Genotypes ; Germination ; germination timing ; Inbreeding ; Life cycle engineering ; Life cycles ; life‐history evolution ; Natural selection ; QTL mapping ; Quantitative trait loci ; Reproductive fitness ; Seedlings ; Seeds ; trade‐off</subject><ispartof>Molecular ecology, 2018-06, Vol.27 (11), p.2498-2511</ispartof><rights>2018 John Wiley & Sons Ltd</rights><rights>2018 John Wiley & Sons Ltd.</rights><rights>Copyright © 2018 John Wiley & Sons Ltd</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c4607-704484e6169ea2de4f77d995aaf35d9106e543479d1b069cfb65cee041a1822f3</citedby><cites>FETCH-LOGICAL-c4607-704484e6169ea2de4f77d995aaf35d9106e543479d1b069cfb65cee041a1822f3</cites><orcidid>0000-0001-9573-2463</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>230,314,780,784,885,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/29676059$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink><backlink>$$Uhttps://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-302861$$DView record from Swedish Publication Index$$Hfree_for_read</backlink></links><search><creatorcontrib>Postma, Froukje M.</creatorcontrib><creatorcontrib>Ågren, Jon</creatorcontrib><title>Among‐year variation in selection during early life stages and the genetic basis of fitness in Arabidopsis thaliana</title><title>Molecular ecology</title><addtitle>Mol Ecol</addtitle><description>Incomplete information regarding both selection regimes and the genetic basis of fitness limits our understanding of adaptive evolution. Among‐year variation in the genetic basis of fitness is rarely quantified, and estimates of selection are typically based on single components of fitness, thus potentially missing conflicting selection acting during other life‐history stages. Here, we examined among‐year variation in selection on a key life‐history trait and the genetic basis of fitness covering the whole life cycle in the annual plant Arabidopsis thaliana. We planted freshly matured seeds of >200 recombinant inbred lines (RILs) derived from a cross between two locally adapted populations (Italy and Sweden), and both parental genotypes at the native site of the Swedish population in three consecutive years. We quantified selection against the nonlocal Italian genotype, mapped quantitative trait loci (QTL) for fitness and its components, and quantified selection on timing of germination during different life stages. In all 3 years, the local Swedish genotype outperformed the nonlocal Italian genotype. However, both the contribution of early life stages to relative fitness, and the effects of fitness QTL varied among years. Timing of germination was under conflicting selection through seedling establishment vs. adult survival and fecundity, and both the direction and magnitude of net selection varied among years. Our results demonstrate that selection during early life stages and the genetic basis of fitness can vary markedly among years, emphasizing the need for multiyear studies considering the whole life cycle for a full understanding of natural selection and mechanisms maintaining local adaptation.</description><subject>adaptation</subject><subject>Arabidopsis thaliana</subject><subject>Biological evolution</subject><subject>conflicting selection</subject><subject>Evolution & development</subject><subject>Fecundity</subject><subject>Fitness</subject><subject>Genetic diversity</subject><subject>Genotype & phenotype</subject><subject>Genotypes</subject><subject>Germination</subject><subject>germination timing</subject><subject>Inbreeding</subject><subject>Life cycle engineering</subject><subject>Life cycles</subject><subject>life‐history evolution</subject><subject>Natural selection</subject><subject>QTL mapping</subject><subject>Quantitative trait loci</subject><subject>Reproductive fitness</subject><subject>Seedlings</subject><subject>Seeds</subject><subject>trade‐off</subject><issn>0962-1083</issn><issn>1365-294X</issn><issn>1365-294X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2018</creationdate><recordtype>article</recordtype><recordid>eNp10UFu1DAUBmALUdGhsOACyBKbViKt7ThOvBwNBSoVsQHEznKS59RVYg92TDW7HoEzchI8TdsFUr2xLH_69Z5-hN5QckrzOZugO6VcyPoZWtFSVAWT_OdztCJSsIKSpjxEL2O8JoSWrKpeoEMmRS1IJVcorSfvhr-3f3agA_6tg9Wz9Q5bhyOM0N09-hSsG3AW4w6P1gCOsx4gYu16PF8BHsDBbDvc6mgj9gYbOzuIcR-zDrq1vd_uf-YrPVrt9Ct0YPQY4fX9fYS-fzz_tvlcXH79dLFZXxYdF6QuasJ5w0FQIUGzHrip617KSmtTVr2kREDFS17LnrZEyM60ouoACKeaNoyZ8gi9X3LjDWxTq7bBTjrslNdWfbA_1sqHQaWkSsIaQTM_Xvg2-F8J4qwmGzsYR-3Ap6hYZjI7JjJ99x-99im4vExWvOZcsKbJ6mRRXfAxBjCPE1Ci9tWpXJ26qy7bt_eJqZ2gf5QPXWVwtoAbO8Lu6ST15XyzRP4Dwkyj3A</recordid><startdate>201806</startdate><enddate>201806</enddate><creator>Postma, Froukje M.</creator><creator>Ågren, Jon</creator><general>Blackwell Publishing Ltd</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7SN</scope><scope>7SS</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>M7N</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope><scope>ADTPV</scope><scope>AOWAS</scope><scope>DF2</scope><orcidid>https://orcid.org/0000-0001-9573-2463</orcidid></search><sort><creationdate>201806</creationdate><title>Among‐year variation in selection during early life stages and the genetic basis of fitness in Arabidopsis thaliana</title><author>Postma, Froukje M. ; Ågren, Jon</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c4607-704484e6169ea2de4f77d995aaf35d9106e543479d1b069cfb65cee041a1822f3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2018</creationdate><topic>adaptation</topic><topic>Arabidopsis thaliana</topic><topic>Biological evolution</topic><topic>conflicting selection</topic><topic>Evolution & development</topic><topic>Fecundity</topic><topic>Fitness</topic><topic>Genetic diversity</topic><topic>Genotype & phenotype</topic><topic>Genotypes</topic><topic>Germination</topic><topic>germination timing</topic><topic>Inbreeding</topic><topic>Life cycle engineering</topic><topic>Life cycles</topic><topic>life‐history evolution</topic><topic>Natural selection</topic><topic>QTL mapping</topic><topic>Quantitative trait loci</topic><topic>Reproductive fitness</topic><topic>Seedlings</topic><topic>Seeds</topic><topic>trade‐off</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Postma, Froukje M.</creatorcontrib><creatorcontrib>Ågren, Jon</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>Ecology Abstracts</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><collection>SwePub</collection><collection>SwePub Articles</collection><collection>SWEPUB Uppsala universitet</collection><jtitle>Molecular ecology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Postma, Froukje M.</au><au>Ågren, Jon</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Among‐year variation in selection during early life stages and the genetic basis of fitness in Arabidopsis thaliana</atitle><jtitle>Molecular ecology</jtitle><addtitle>Mol Ecol</addtitle><date>2018-06</date><risdate>2018</risdate><volume>27</volume><issue>11</issue><spage>2498</spage><epage>2511</epage><pages>2498-2511</pages><issn>0962-1083</issn><issn>1365-294X</issn><eissn>1365-294X</eissn><abstract>Incomplete information regarding both selection regimes and the genetic basis of fitness limits our understanding of adaptive evolution. Among‐year variation in the genetic basis of fitness is rarely quantified, and estimates of selection are typically based on single components of fitness, thus potentially missing conflicting selection acting during other life‐history stages. Here, we examined among‐year variation in selection on a key life‐history trait and the genetic basis of fitness covering the whole life cycle in the annual plant Arabidopsis thaliana. We planted freshly matured seeds of >200 recombinant inbred lines (RILs) derived from a cross between two locally adapted populations (Italy and Sweden), and both parental genotypes at the native site of the Swedish population in three consecutive years. We quantified selection against the nonlocal Italian genotype, mapped quantitative trait loci (QTL) for fitness and its components, and quantified selection on timing of germination during different life stages. In all 3 years, the local Swedish genotype outperformed the nonlocal Italian genotype. However, both the contribution of early life stages to relative fitness, and the effects of fitness QTL varied among years. Timing of germination was under conflicting selection through seedling establishment vs. adult survival and fecundity, and both the direction and magnitude of net selection varied among years. Our results demonstrate that selection during early life stages and the genetic basis of fitness can vary markedly among years, emphasizing the need for multiyear studies considering the whole life cycle for a full understanding of natural selection and mechanisms maintaining local adaptation.</abstract><cop>England</cop><pub>Blackwell Publishing Ltd</pub><pmid>29676059</pmid><doi>10.1111/mec.14697</doi><tpages>14</tpages><orcidid>https://orcid.org/0000-0001-9573-2463</orcidid></addata></record> |
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subjects | adaptation Arabidopsis thaliana Biological evolution conflicting selection Evolution & development Fecundity Fitness Genetic diversity Genotype & phenotype Genotypes Germination germination timing Inbreeding Life cycle engineering Life cycles life‐history evolution Natural selection QTL mapping Quantitative trait loci Reproductive fitness Seedlings Seeds trade‐off |
title | Among‐year variation in selection during early life stages and the genetic basis of fitness in Arabidopsis thaliana |
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