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The use of ICD codes to identify IBD subtypes and phenotypes of the Montreal classification in the Swedish National Patient Register
Introduction: Whether data on International Classification of Diseases (ICD)-codes from the Swedish National Patient Register (NPR) correctly correspond to subtypes of inflammatory bowel disease (IBD) and phenotypes of the Montreal classification scheme among patients with prevalent disease is unkno...
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Published in: | Scandinavian journal of gastroenterology 2020, Vol.55 (4), p.430-435 |
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creator | Shrestha, Sarita Olén, Ola Eriksson, Carl Everhov, Åsa H. Myrelid, Pär Visuri, Isabella Ludvigsson, Jonas F. Schoultz, Ida Montgomery, Scott Sachs, Michael C. Halfvarson, Jonas Olsson, Malin Hjortswang, Henrik Bengtsson, Jonas Strid, Hans Andersson, Marie Jäghult, Susanna Eberhardson, Michael Nordenvall, Caroline Björk, Jan Fagerberg, Ulrika L. Rejler, Martin Grip, Olof Karling, Pontus Block, Mattias Angenete, Eva Hellström, Per M. Gustavsson, Anders |
description | Introduction: Whether data on International Classification of Diseases (ICD)-codes from the Swedish National Patient Register (NPR) correctly correspond to subtypes of inflammatory bowel disease (IBD) and phenotypes of the Montreal classification scheme among patients with prevalent disease is unknown.
Materials and methods: We obtained information on IBD subtypes and phenotypes from the medical records of 1403 patients with known IBD who underwent biological treatment at ten Swedish hospitals and retrieved information on their IBD-associated diagnostic codes from the NPR. We used previously described algorithms to define IBD subtypes and phenotypes. Finally, we compared these register-generated subtypes and phenotypes with the corresponding information from the medical records and calculated positive predictive values (PPV) with 95% confidence intervals.
Results: Among patients with clinically confirmed disease and diagnostic listings of IBD in the NPR (N = 1401), the PPV was 97 (96-99)% for Crohn's disease, 98 (97-100)% for ulcerative colitis, and 8 (4-11)% for IBD-unclassified. The overall accuracy for age at diagnosis was 95% (when defined as A1, A2, or A3). Examining the validity of codes representing disease phenotype, the PPV was 36 (32-40)% for colonic Crohn's disease (L2), 61 (56-65)% for non-stricturing/non-penetrating Crohn's disease behaviour (B1) and 83 (78-87)% for perianal disease. Correspondingly, the PPV was 80 (71-89)% for proctitis (E1)/left-sided colitis (E2) in ulcerative colitis.
Conclusions: Among people with known IBD, the NPR is a reliable source of data to classify most subtypes of prevalent IBD, even though misclassification commonly occurred in Crohn's disease location and behaviour and also among IBD-unclassified patients. |
doi_str_mv | 10.1080/00365521.2020.1740778 |
format | article |
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Materials and methods: We obtained information on IBD subtypes and phenotypes from the medical records of 1403 patients with known IBD who underwent biological treatment at ten Swedish hospitals and retrieved information on their IBD-associated diagnostic codes from the NPR. We used previously described algorithms to define IBD subtypes and phenotypes. Finally, we compared these register-generated subtypes and phenotypes with the corresponding information from the medical records and calculated positive predictive values (PPV) with 95% confidence intervals.
Results: Among patients with clinically confirmed disease and diagnostic listings of IBD in the NPR (N = 1401), the PPV was 97 (96-99)% for Crohn's disease, 98 (97-100)% for ulcerative colitis, and 8 (4-11)% for IBD-unclassified. The overall accuracy for age at diagnosis was 95% (when defined as A1, A2, or A3). Examining the validity of codes representing disease phenotype, the PPV was 36 (32-40)% for colonic Crohn's disease (L2), 61 (56-65)% for non-stricturing/non-penetrating Crohn's disease behaviour (B1) and 83 (78-87)% for perianal disease. Correspondingly, the PPV was 80 (71-89)% for proctitis (E1)/left-sided colitis (E2) in ulcerative colitis.
Conclusions: Among people with known IBD, the NPR is a reliable source of data to classify most subtypes of prevalent IBD, even though misclassification commonly occurred in Crohn's disease location and behaviour and also among IBD-unclassified patients.</description><identifier>ISSN: 0036-5521</identifier><identifier>ISSN: 1502-7708</identifier><identifier>EISSN: 1502-7708</identifier><identifier>DOI: 10.1080/00365521.2020.1740778</identifier><identifier>PMID: 32370571</identifier><language>eng</language><publisher>England: Taylor & Francis</publisher><subject>algorithms ; Clinical Medicine ; Crohn's disease ; crohns-disease ; diagnosis ; epidemiology ; follow-up ; Gastroenterology & Hepatology ; Humans ; ICD-codes ; indeterminate colitis ; Inflammatory bowel disease ; Inflammatory Bowel Diseases - classification ; Inflammatory Bowel Diseases - diagnosis ; International Classification of Diseases ; Klinisk medicin ; Medicin och hälsovetenskap ; Montreal classification ; National ; National Patient Register ; onset ; Patient Register ; population ; Predictive Value of Tests ; Registries ; Retrospective Studies ; Sweden ; Swedish Quality Register for IBD ; ulcerative colitis ; validation</subject><ispartof>Scandinavian journal of gastroenterology, 2020, Vol.55 (4), p.430-435</ispartof><rights>2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. 2020</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c687t-e6dddab08dc9abc911676e07dcf3daef4eef879af4984a4448fd7a47d1fb76293</citedby><cites>FETCH-LOGICAL-c687t-e6dddab08dc9abc911676e07dcf3daef4eef879af4984a4448fd7a47d1fb76293</cites><orcidid>0000-0001-7518-9213 ; 0000-0002-1046-383X</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>230,314,780,784,885,4024,27923,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/32370571$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink><backlink>$$Uhttps://urn.kb.se/resolve?urn=urn:nbn:se:hj:diva-49368$$DView record from Swedish Publication Index$$Hfree_for_read</backlink><backlink>$$Uhttps://urn.kb.se/resolve?urn=urn:nbn:se:liu:diva-166116$$DView record from Swedish Publication Index$$Hfree_for_read</backlink><backlink>$$Uhttps://urn.kb.se/resolve?urn=urn:nbn:se:oru:diva-81780$$DView record from Swedish Publication Index$$Hfree_for_read</backlink><backlink>$$Uhttps://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-413243$$DView record from Swedish Publication Index$$Hfree_for_read</backlink><backlink>$$Uhttps://gup.ub.gu.se/publication/296569$$DView record from Swedish Publication Index$$Hfree_for_read</backlink><backlink>$$Uhttp://kipublications.ki.se/Default.aspx?queryparsed=id:143719022$$DView record from Swedish Publication Index$$Hfree_for_read</backlink></links><search><creatorcontrib>Shrestha, Sarita</creatorcontrib><creatorcontrib>Olén, Ola</creatorcontrib><creatorcontrib>Eriksson, Carl</creatorcontrib><creatorcontrib>Everhov, Åsa H.</creatorcontrib><creatorcontrib>Myrelid, Pär</creatorcontrib><creatorcontrib>Visuri, Isabella</creatorcontrib><creatorcontrib>Ludvigsson, Jonas F.</creatorcontrib><creatorcontrib>Schoultz, Ida</creatorcontrib><creatorcontrib>Montgomery, Scott</creatorcontrib><creatorcontrib>Sachs, Michael C.</creatorcontrib><creatorcontrib>Halfvarson, Jonas</creatorcontrib><creatorcontrib>Olsson, Malin</creatorcontrib><creatorcontrib>Hjortswang, Henrik</creatorcontrib><creatorcontrib>Bengtsson, Jonas</creatorcontrib><creatorcontrib>Strid, Hans</creatorcontrib><creatorcontrib>Andersson, Marie</creatorcontrib><creatorcontrib>Jäghult, Susanna</creatorcontrib><creatorcontrib>Eberhardson, Michael</creatorcontrib><creatorcontrib>Nordenvall, Caroline</creatorcontrib><creatorcontrib>Björk, Jan</creatorcontrib><creatorcontrib>Fagerberg, Ulrika L.</creatorcontrib><creatorcontrib>Rejler, Martin</creatorcontrib><creatorcontrib>Grip, Olof</creatorcontrib><creatorcontrib>Karling, Pontus</creatorcontrib><creatorcontrib>Block, Mattias</creatorcontrib><creatorcontrib>Angenete, Eva</creatorcontrib><creatorcontrib>Hellström, Per M.</creatorcontrib><creatorcontrib>Gustavsson, Anders</creatorcontrib><creatorcontrib>SWIBREG Study Group</creatorcontrib><creatorcontrib>The SWIBREG Study Group</creatorcontrib><title>The use of ICD codes to identify IBD subtypes and phenotypes of the Montreal classification in the Swedish National Patient Register</title><title>Scandinavian journal of gastroenterology</title><addtitle>Scand J Gastroenterol</addtitle><description>Introduction: Whether data on International Classification of Diseases (ICD)-codes from the Swedish National Patient Register (NPR) correctly correspond to subtypes of inflammatory bowel disease (IBD) and phenotypes of the Montreal classification scheme among patients with prevalent disease is unknown.
Materials and methods: We obtained information on IBD subtypes and phenotypes from the medical records of 1403 patients with known IBD who underwent biological treatment at ten Swedish hospitals and retrieved information on their IBD-associated diagnostic codes from the NPR. We used previously described algorithms to define IBD subtypes and phenotypes. Finally, we compared these register-generated subtypes and phenotypes with the corresponding information from the medical records and calculated positive predictive values (PPV) with 95% confidence intervals.
Results: Among patients with clinically confirmed disease and diagnostic listings of IBD in the NPR (N = 1401), the PPV was 97 (96-99)% for Crohn's disease, 98 (97-100)% for ulcerative colitis, and 8 (4-11)% for IBD-unclassified. The overall accuracy for age at diagnosis was 95% (when defined as A1, A2, or A3). Examining the validity of codes representing disease phenotype, the PPV was 36 (32-40)% for colonic Crohn's disease (L2), 61 (56-65)% for non-stricturing/non-penetrating Crohn's disease behaviour (B1) and 83 (78-87)% for perianal disease. Correspondingly, the PPV was 80 (71-89)% for proctitis (E1)/left-sided colitis (E2) in ulcerative colitis.
Conclusions: Among people with known IBD, the NPR is a reliable source of data to classify most subtypes of prevalent IBD, even though misclassification commonly occurred in Crohn's disease location and behaviour and also among IBD-unclassified patients.</description><subject>algorithms</subject><subject>Clinical Medicine</subject><subject>Crohn's disease</subject><subject>crohns-disease</subject><subject>diagnosis</subject><subject>epidemiology</subject><subject>follow-up</subject><subject>Gastroenterology & Hepatology</subject><subject>Humans</subject><subject>ICD-codes</subject><subject>indeterminate colitis</subject><subject>Inflammatory bowel disease</subject><subject>Inflammatory Bowel Diseases - classification</subject><subject>Inflammatory Bowel Diseases - diagnosis</subject><subject>International Classification of Diseases</subject><subject>Klinisk medicin</subject><subject>Medicin och hälsovetenskap</subject><subject>Montreal classification</subject><subject>National</subject><subject>National Patient Register</subject><subject>onset</subject><subject>Patient Register</subject><subject>population</subject><subject>Predictive Value of Tests</subject><subject>Registries</subject><subject>Retrospective Studies</subject><subject>Sweden</subject><subject>Swedish Quality Register for IBD</subject><subject>ulcerative 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Carl</creator><creator>Everhov, Åsa H.</creator><creator>Myrelid, Pär</creator><creator>Visuri, Isabella</creator><creator>Ludvigsson, Jonas F.</creator><creator>Schoultz, Ida</creator><creator>Montgomery, Scott</creator><creator>Sachs, Michael C.</creator><creator>Halfvarson, Jonas</creator><creator>Olsson, Malin</creator><creator>Hjortswang, Henrik</creator><creator>Bengtsson, Jonas</creator><creator>Strid, Hans</creator><creator>Andersson, Marie</creator><creator>Jäghult, Susanna</creator><creator>Eberhardson, Michael</creator><creator>Nordenvall, Caroline</creator><creator>Björk, Jan</creator><creator>Fagerberg, Ulrika L.</creator><creator>Rejler, Martin</creator><creator>Grip, Olof</creator><creator>Karling, Pontus</creator><creator>Block, Mattias</creator><creator>Angenete, Eva</creator><creator>Hellström, Per M.</creator><creator>Gustavsson, Anders</creator><general>Taylor & 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Jonas ; Strid, Hans ; Andersson, Marie ; Jäghult, Susanna ; Eberhardson, Michael ; Nordenvall, Caroline ; Björk, Jan ; Fagerberg, Ulrika L. ; Rejler, Martin ; Grip, Olof ; Karling, Pontus ; Block, Mattias ; Angenete, Eva ; Hellström, Per M. ; Gustavsson, Anders</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c687t-e6dddab08dc9abc911676e07dcf3daef4eef879af4984a4448fd7a47d1fb76293</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2020</creationdate><topic>algorithms</topic><topic>Clinical Medicine</topic><topic>Crohn's disease</topic><topic>crohns-disease</topic><topic>diagnosis</topic><topic>epidemiology</topic><topic>follow-up</topic><topic>Gastroenterology & Hepatology</topic><topic>Humans</topic><topic>ICD-codes</topic><topic>indeterminate colitis</topic><topic>Inflammatory bowel disease</topic><topic>Inflammatory Bowel Diseases - classification</topic><topic>Inflammatory Bowel Diseases - diagnosis</topic><topic>International Classification of Diseases</topic><topic>Klinisk medicin</topic><topic>Medicin och hälsovetenskap</topic><topic>Montreal classification</topic><topic>National</topic><topic>National Patient Register</topic><topic>onset</topic><topic>Patient Register</topic><topic>population</topic><topic>Predictive Value of Tests</topic><topic>Registries</topic><topic>Retrospective Studies</topic><topic>Sweden</topic><topic>Swedish Quality Register for IBD</topic><topic>ulcerative colitis</topic><topic>validation</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Shrestha, Sarita</creatorcontrib><creatorcontrib>Olén, Ola</creatorcontrib><creatorcontrib>Eriksson, Carl</creatorcontrib><creatorcontrib>Everhov, Åsa H.</creatorcontrib><creatorcontrib>Myrelid, Pär</creatorcontrib><creatorcontrib>Visuri, Isabella</creatorcontrib><creatorcontrib>Ludvigsson, Jonas F.</creatorcontrib><creatorcontrib>Schoultz, 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Anders</creatorcontrib><creatorcontrib>SWIBREG Study Group</creatorcontrib><creatorcontrib>The SWIBREG Study Group</creatorcontrib><collection>Taylor & Francis Open Access(OpenAccess)</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>SWEPUB Högskolan i Jönköping full text</collection><collection>SwePub</collection><collection>SwePub Articles</collection><collection>SWEPUB Freely available online</collection><collection>SWEPUB Högskolan i Jönköping</collection><collection>SwePub Articles full text</collection><collection>SWEPUB Linköpings universitet full text</collection><collection>SWEPUB Linköpings universitet</collection><collection>SWEPUB Örebro universitet full text</collection><collection>SWEPUB Örebro universitet</collection><collection>SWEPUB Uppsala universitet full 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Group</aucorp><aucorp>The SWIBREG Study Group</aucorp><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>The use of ICD codes to identify IBD subtypes and phenotypes of the Montreal classification in the Swedish National Patient Register</atitle><jtitle>Scandinavian journal of gastroenterology</jtitle><addtitle>Scand J Gastroenterol</addtitle><date>2020</date><risdate>2020</risdate><volume>55</volume><issue>4</issue><spage>430</spage><epage>435</epage><pages>430-435</pages><issn>0036-5521</issn><issn>1502-7708</issn><eissn>1502-7708</eissn><abstract>Introduction: Whether data on International Classification of Diseases (ICD)-codes from the Swedish National Patient Register (NPR) correctly correspond to subtypes of inflammatory bowel disease (IBD) and phenotypes of the Montreal classification scheme among patients with prevalent disease is unknown.
Materials and methods: We obtained information on IBD subtypes and phenotypes from the medical records of 1403 patients with known IBD who underwent biological treatment at ten Swedish hospitals and retrieved information on their IBD-associated diagnostic codes from the NPR. We used previously described algorithms to define IBD subtypes and phenotypes. Finally, we compared these register-generated subtypes and phenotypes with the corresponding information from the medical records and calculated positive predictive values (PPV) with 95% confidence intervals.
Results: Among patients with clinically confirmed disease and diagnostic listings of IBD in the NPR (N = 1401), the PPV was 97 (96-99)% for Crohn's disease, 98 (97-100)% for ulcerative colitis, and 8 (4-11)% for IBD-unclassified. The overall accuracy for age at diagnosis was 95% (when defined as A1, A2, or A3). Examining the validity of codes representing disease phenotype, the PPV was 36 (32-40)% for colonic Crohn's disease (L2), 61 (56-65)% for non-stricturing/non-penetrating Crohn's disease behaviour (B1) and 83 (78-87)% for perianal disease. Correspondingly, the PPV was 80 (71-89)% for proctitis (E1)/left-sided colitis (E2) in ulcerative colitis.
Conclusions: Among people with known IBD, the NPR is a reliable source of data to classify most subtypes of prevalent IBD, even though misclassification commonly occurred in Crohn's disease location and behaviour and also among IBD-unclassified patients.</abstract><cop>England</cop><pub>Taylor & Francis</pub><pmid>32370571</pmid><doi>10.1080/00365521.2020.1740778</doi><tpages>6</tpages><orcidid>https://orcid.org/0000-0001-7518-9213</orcidid><orcidid>https://orcid.org/0000-0002-1046-383X</orcidid><oa>free_for_read</oa></addata></record> |
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recordid | cdi_swepub_primary_oai_swepub_ki_se_471526 |
source | Taylor and Francis:Jisc Collections:Taylor and Francis Read and Publish Agreement 2024-2025:Medical Collection (Reading list) |
subjects | algorithms Clinical Medicine Crohn's disease crohns-disease diagnosis epidemiology follow-up Gastroenterology & Hepatology Humans ICD-codes indeterminate colitis Inflammatory bowel disease Inflammatory Bowel Diseases - classification Inflammatory Bowel Diseases - diagnosis International Classification of Diseases Klinisk medicin Medicin och hälsovetenskap Montreal classification National National Patient Register onset Patient Register population Predictive Value of Tests Registries Retrospective Studies Sweden Swedish Quality Register for IBD ulcerative colitis validation |
title | The use of ICD codes to identify IBD subtypes and phenotypes of the Montreal classification in the Swedish National Patient Register |
url | http://sfxeu10.hosted.exlibrisgroup.com/loughborough?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2024-12-28T14%3A54%3A45IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-pubmed_swepu&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=The%20use%20of%20ICD%20codes%20to%20identify%20IBD%20subtypes%20and%20phenotypes%20of%20the%20Montreal%20classification%20in%20the%20Swedish%20National%20Patient%20Register&rft.jtitle=Scandinavian%20journal%20of%20gastroenterology&rft.au=Shrestha,%20Sarita&rft.aucorp=SWIBREG%20Study%20Group&rft.date=2020&rft.volume=55&rft.issue=4&rft.spage=430&rft.epage=435&rft.pages=430-435&rft.issn=0036-5521&rft.eissn=1502-7708&rft_id=info:doi/10.1080/00365521.2020.1740778&rft_dat=%3Cpubmed_swepu%3E32370571%3C/pubmed_swepu%3E%3Cgrp_id%3Ecdi_FETCH-LOGICAL-c687t-e6dddab08dc9abc911676e07dcf3daef4eef879af4984a4448fd7a47d1fb76293%3C/grp_id%3E%3Coa%3E%3C/oa%3E%3Curl%3E%3C/url%3E&rft_id=info:oai/&rft_id=info:pmid/32370571&rfr_iscdi=true |