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International Quality Assurance Study for Characterization of Streptococcus pyogenes
Surveillance of group A streptococcal (GAS) infections was undertaken as a major component of the European Commission-funded project on severe GAS disease in Europe (strep-EURO). One aim of strep-EURO was to improve the quality of GAS characterization by standardization of methods. An external quali...
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Published in: | Journal of Clinical Microbiology 2007-04, Vol.45 (4), p.1175-1179 |
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container_title | Journal of Clinical Microbiology |
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creator | Neal, Shona Beall, Bernard Ekelund, Kim Henriques-Normark, Birgitta Jasir, Aftab Johnson, Dwight Kaplan, Edward Lovgren, Marguerite Reinert, Ralf Rene Efstratiou, Androulla |
description | Surveillance of group A streptococcal (GAS) infections was undertaken as a major component of the European Commission-funded project on severe GAS disease in Europe (strep-EURO). One aim of strep-EURO was to improve the quality of GAS characterization by standardization of methods. An external quality assurance study (EQA) was therefore carried out to evaluate current global performance. Eleven strep-EURO and seven other streptococcal reference centers received a panel of 20 coded GAS isolates for typing. Conventional phenotypic typing (based on cell surface T and M protein antigens and opacity factor [OF] production) and molecular methods (emm gene typing) were used either as single or combined approaches to GAS typing. T typing was performed by 16 centers; 12 centers found one or more of the 20 strains nontypeable (typeability, 89%), and 11 centers reported at least one incorrect result (concordance, 93%). The 10 centers that tested for OF production achieved 96% concordance. Limited availability of antisera resulted in poor typeability values from the four centers that performed phenotypic M typing (41%), three of which also performed anti-OF typing (typeability, 63%); however, concordance was high for both M (100%) and anti-OF (94%) typing. In contrast, the 15 centers that performed emm gene sequencing achieved excellent typeability (97%) and concordance (98%), although comparison of the performance between centers yielded typeability rates from 65 to 100% and concordance values from 83 to 100%. With the rapid expansion and use of molecular genotypic methods to characterize GAS, continuation of EQA is essential in order to achieve international standardization and comparison of type distributions. |
doi_str_mv | 10.1128/JCM.02146-06 |
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One aim of strep-EURO was to improve the quality of GAS characterization by standardization of methods. An external quality assurance study (EQA) was therefore carried out to evaluate current global performance. Eleven strep-EURO and seven other streptococcal reference centers received a panel of 20 coded GAS isolates for typing. Conventional phenotypic typing (based on cell surface T and M protein antigens and opacity factor [OF] production) and molecular methods (emm gene typing) were used either as single or combined approaches to GAS typing. T typing was performed by 16 centers; 12 centers found one or more of the 20 strains nontypeable (typeability, 89%), and 11 centers reported at least one incorrect result (concordance, 93%). The 10 centers that tested for OF production achieved 96% concordance. Limited availability of antisera resulted in poor typeability values from the four centers that performed phenotypic M typing (41%), three of which also performed anti-OF typing (typeability, 63%); however, concordance was high for both M (100%) and anti-OF (94%) typing. In contrast, the 15 centers that performed emm gene sequencing achieved excellent typeability (97%) and concordance (98%), although comparison of the performance between centers yielded typeability rates from 65 to 100% and concordance values from 83 to 100%. With the rapid expansion and use of molecular genotypic methods to characterize GAS, continuation of EQA is essential in order to achieve international standardization and comparison of type distributions.</description><identifier>ISSN: 0095-1137</identifier><identifier>ISSN: 1098-660X</identifier><identifier>EISSN: 1098-660X</identifier><identifier>EISSN: 1098-5530</identifier><identifier>DOI: 10.1128/JCM.02146-06</identifier><identifier>PMID: 17267628</identifier><identifier>CODEN: JCMIDW</identifier><language>eng</language><publisher>Washington, DC: American Society for Microbiology</publisher><subject>Antigens, Bacterial - analysis ; Antigens, Bacterial - genetics ; Bacterial Outer Membrane Proteins - analysis ; Bacterial Outer Membrane Proteins - genetics ; Bacterial Typing Techniques - standards ; Bacteriological Techniques - standards ; Bacteriology ; Basic Medicine ; Biological and medical sciences ; Carrier Proteins - analysis ; Carrier Proteins - genetics ; Europe ; Fundamental and applied biological sciences. Psychology ; Genotype ; Humans ; Infectious diseases ; Medical and Health Sciences ; Medical sciences ; Medicin och hälsovetenskap ; Medicinska och farmaceutiska grundvetenskaper ; Microbiology ; Microbiology in the medical area ; Mikrobiologi inom det medicinska området ; Miscellaneous ; Peptide Hydrolases - analysis ; Quality Control ; Sequence Analysis, DNA ; Serotyping ; Streptococcal Infections - microbiology ; Streptococcus pyogenes ; Streptococcus pyogenes - classification ; Streptococcus pyogenes - isolation & purification</subject><ispartof>Journal of Clinical Microbiology, 2007-04, Vol.45 (4), p.1175-1179</ispartof><rights>2007 INIST-CNRS</rights><rights>Copyright © 2007, American Society for Microbiology 2007</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c611t-70fa63a7b175e79d003a37b06e1f5346a94d93d496574060977b698dd0b8fa893</citedby><cites>FETCH-LOGICAL-c611t-70fa63a7b175e79d003a37b06e1f5346a94d93d496574060977b698dd0b8fa893</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC1865803/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC1865803/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,727,780,784,885,3188,3189,27924,27925,53791,53793</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=18683051$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/17267628$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink><backlink>$$Uhttps://lup.lub.lu.se/record/665962$$DView record from Swedish Publication Index$$Hfree_for_read</backlink><backlink>$$Uhttp://kipublications.ki.se/Default.aspx?queryparsed=id:12124535$$DView record from Swedish Publication Index$$Hfree_for_read</backlink></links><search><creatorcontrib>Neal, Shona</creatorcontrib><creatorcontrib>Beall, Bernard</creatorcontrib><creatorcontrib>Ekelund, Kim</creatorcontrib><creatorcontrib>Henriques-Normark, Birgitta</creatorcontrib><creatorcontrib>Jasir, Aftab</creatorcontrib><creatorcontrib>Johnson, Dwight</creatorcontrib><creatorcontrib>Kaplan, Edward</creatorcontrib><creatorcontrib>Lovgren, Marguerite</creatorcontrib><creatorcontrib>Reinert, Ralf Rene</creatorcontrib><creatorcontrib>Efstratiou, Androulla</creatorcontrib><creatorcontrib>Strep-EURO Study Group</creatorcontrib><creatorcontrib>International Streptococcus Reference Laboratories</creatorcontrib><creatorcontrib>Members of the Strep-EURO Study Group and International Streptococcus Reference Laboratories</creatorcontrib><title>International Quality Assurance Study for Characterization of Streptococcus pyogenes</title><title>Journal of Clinical Microbiology</title><addtitle>J Clin Microbiol</addtitle><description>Surveillance of group A streptococcal (GAS) infections was undertaken as a major component of the European Commission-funded project on severe GAS disease in Europe (strep-EURO). One aim of strep-EURO was to improve the quality of GAS characterization by standardization of methods. An external quality assurance study (EQA) was therefore carried out to evaluate current global performance. Eleven strep-EURO and seven other streptococcal reference centers received a panel of 20 coded GAS isolates for typing. Conventional phenotypic typing (based on cell surface T and M protein antigens and opacity factor [OF] production) and molecular methods (emm gene typing) were used either as single or combined approaches to GAS typing. T typing was performed by 16 centers; 12 centers found one or more of the 20 strains nontypeable (typeability, 89%), and 11 centers reported at least one incorrect result (concordance, 93%). The 10 centers that tested for OF production achieved 96% concordance. Limited availability of antisera resulted in poor typeability values from the four centers that performed phenotypic M typing (41%), three of which also performed anti-OF typing (typeability, 63%); however, concordance was high for both M (100%) and anti-OF (94%) typing. In contrast, the 15 centers that performed emm gene sequencing achieved excellent typeability (97%) and concordance (98%), although comparison of the performance between centers yielded typeability rates from 65 to 100% and concordance values from 83 to 100%. With the rapid expansion and use of molecular genotypic methods to characterize GAS, continuation of EQA is essential in order to achieve international standardization and comparison of type distributions.</description><subject>Antigens, Bacterial - analysis</subject><subject>Antigens, Bacterial - genetics</subject><subject>Bacterial Outer Membrane Proteins - analysis</subject><subject>Bacterial Outer Membrane Proteins - genetics</subject><subject>Bacterial Typing Techniques - standards</subject><subject>Bacteriological Techniques - standards</subject><subject>Bacteriology</subject><subject>Basic Medicine</subject><subject>Biological and medical sciences</subject><subject>Carrier Proteins - analysis</subject><subject>Carrier Proteins - genetics</subject><subject>Europe</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Genotype</subject><subject>Humans</subject><subject>Infectious diseases</subject><subject>Medical and Health Sciences</subject><subject>Medical sciences</subject><subject>Medicin och hälsovetenskap</subject><subject>Medicinska och farmaceutiska grundvetenskaper</subject><subject>Microbiology</subject><subject>Microbiology in the medical area</subject><subject>Mikrobiologi inom det medicinska området</subject><subject>Miscellaneous</subject><subject>Peptide Hydrolases - analysis</subject><subject>Quality Control</subject><subject>Sequence Analysis, DNA</subject><subject>Serotyping</subject><subject>Streptococcal Infections - microbiology</subject><subject>Streptococcus pyogenes</subject><subject>Streptococcus pyogenes - classification</subject><subject>Streptococcus pyogenes - isolation & purification</subject><issn>0095-1137</issn><issn>1098-660X</issn><issn>1098-660X</issn><issn>1098-5530</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2007</creationdate><recordtype>article</recordtype><recordid>eNqFks1v1DAQxSMEoqVw4wzhACdSZuLPXJCqFR9FixBqK3GzJomzm5KNFzuhWv56nN2FpYeKg2XL83vP49FLkqcIp4i5fvNp9vkUcuQyA3kvOUYodCYlfLufHAMUIkNk6ih5FMI1AHIuxMPkCFUulcz1cXJ53g_W9zS0rqcu_TpS1w6b9CyE0VNf2fRiGOtN2jifzpbkqYp0-2uLp66JVW_Xg6tcVY0hXW_cwvY2PE4eNNQF-2S_nyRX799dzj5m8y8fzmdn86ySiEOmoCHJSJWohFVFDcCIqRKkxUYwLqngdcFqXkihOEgolCploesaSt2QLthJku18w41dj6VZ-3ZFfmMctWZ_9T2erBEKNZt4fSe_9q4-iP4IMcecCyaidH6ntBvXcZVxbSVEDRSWGZWX2nANZMrYumG80QyFAFAs2r3d2UWvla0r2w-eutsN3ar07dIs3E-DWgoNk8GrvYF3P0YbBrNqQ2W7jnrrxmBUZLRA-V8Q43R1jEIEX-_AyrsQvG3-doNgpqSZmDSzTZqByffZvz84wPtoReDlHqBQUddMcWrDgdNSMxAYuRc7btkuljett4bCylxXK8OF4fFlNU3_-Y5pyBla-OhzdZEDsjhMyQVw9hsSMPFn</recordid><startdate>20070401</startdate><enddate>20070401</enddate><creator>Neal, Shona</creator><creator>Beall, Bernard</creator><creator>Ekelund, Kim</creator><creator>Henriques-Normark, Birgitta</creator><creator>Jasir, Aftab</creator><creator>Johnson, Dwight</creator><creator>Kaplan, Edward</creator><creator>Lovgren, Marguerite</creator><creator>Reinert, Ralf Rene</creator><creator>Efstratiou, Androulla</creator><general>American Society for Microbiology</general><scope>FBQ</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>C1K</scope><scope>7X8</scope><scope>5PM</scope><scope>ADTPV</scope><scope>AGCHP</scope><scope>AOWAS</scope><scope>D8T</scope><scope>D95</scope><scope>ZZAVC</scope></search><sort><creationdate>20070401</creationdate><title>International Quality Assurance Study for Characterization of Streptococcus pyogenes</title><author>Neal, Shona ; Beall, Bernard ; Ekelund, Kim ; Henriques-Normark, Birgitta ; Jasir, Aftab ; Johnson, Dwight ; Kaplan, Edward ; Lovgren, Marguerite ; Reinert, Ralf Rene ; Efstratiou, Androulla</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c611t-70fa63a7b175e79d003a37b06e1f5346a94d93d496574060977b698dd0b8fa893</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2007</creationdate><topic>Antigens, Bacterial - analysis</topic><topic>Antigens, Bacterial - genetics</topic><topic>Bacterial Outer Membrane Proteins - analysis</topic><topic>Bacterial Outer Membrane Proteins - genetics</topic><topic>Bacterial Typing Techniques - standards</topic><topic>Bacteriological Techniques - standards</topic><topic>Bacteriology</topic><topic>Basic Medicine</topic><topic>Biological and medical sciences</topic><topic>Carrier Proteins - analysis</topic><topic>Carrier Proteins - genetics</topic><topic>Europe</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Genotype</topic><topic>Humans</topic><topic>Infectious diseases</topic><topic>Medical and Health Sciences</topic><topic>Medical sciences</topic><topic>Medicin och hälsovetenskap</topic><topic>Medicinska och farmaceutiska grundvetenskaper</topic><topic>Microbiology</topic><topic>Microbiology in the medical area</topic><topic>Mikrobiologi inom det medicinska området</topic><topic>Miscellaneous</topic><topic>Peptide Hydrolases - analysis</topic><topic>Quality Control</topic><topic>Sequence Analysis, DNA</topic><topic>Serotyping</topic><topic>Streptococcal Infections - microbiology</topic><topic>Streptococcus pyogenes</topic><topic>Streptococcus pyogenes - classification</topic><topic>Streptococcus pyogenes - isolation & purification</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Neal, Shona</creatorcontrib><creatorcontrib>Beall, Bernard</creatorcontrib><creatorcontrib>Ekelund, Kim</creatorcontrib><creatorcontrib>Henriques-Normark, Birgitta</creatorcontrib><creatorcontrib>Jasir, Aftab</creatorcontrib><creatorcontrib>Johnson, Dwight</creatorcontrib><creatorcontrib>Kaplan, Edward</creatorcontrib><creatorcontrib>Lovgren, Marguerite</creatorcontrib><creatorcontrib>Reinert, Ralf Rene</creatorcontrib><creatorcontrib>Efstratiou, Androulla</creatorcontrib><creatorcontrib>Strep-EURO Study Group</creatorcontrib><creatorcontrib>International Streptococcus Reference Laboratories</creatorcontrib><creatorcontrib>Members of the Strep-EURO Study Group and International Streptococcus Reference Laboratories</creatorcontrib><collection>AGRIS</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Environmental Sciences and Pollution Management</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>SwePub</collection><collection>SWEPUB Lunds universitet full text</collection><collection>SwePub Articles</collection><collection>SWEPUB Freely available online</collection><collection>SWEPUB Lunds universitet</collection><collection>SwePub Articles full text</collection><jtitle>Journal of Clinical Microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Neal, Shona</au><au>Beall, Bernard</au><au>Ekelund, Kim</au><au>Henriques-Normark, Birgitta</au><au>Jasir, Aftab</au><au>Johnson, Dwight</au><au>Kaplan, Edward</au><au>Lovgren, Marguerite</au><au>Reinert, Ralf Rene</au><au>Efstratiou, Androulla</au><aucorp>Strep-EURO Study Group</aucorp><aucorp>International Streptococcus Reference Laboratories</aucorp><aucorp>Members of the Strep-EURO Study Group and International Streptococcus Reference Laboratories</aucorp><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>International Quality Assurance Study for Characterization of Streptococcus pyogenes</atitle><jtitle>Journal of Clinical Microbiology</jtitle><addtitle>J Clin Microbiol</addtitle><date>2007-04-01</date><risdate>2007</risdate><volume>45</volume><issue>4</issue><spage>1175</spage><epage>1179</epage><pages>1175-1179</pages><issn>0095-1137</issn><issn>1098-660X</issn><eissn>1098-660X</eissn><eissn>1098-5530</eissn><coden>JCMIDW</coden><abstract>Surveillance of group A streptococcal (GAS) infections was undertaken as a major component of the European Commission-funded project on severe GAS disease in Europe (strep-EURO). One aim of strep-EURO was to improve the quality of GAS characterization by standardization of methods. An external quality assurance study (EQA) was therefore carried out to evaluate current global performance. Eleven strep-EURO and seven other streptococcal reference centers received a panel of 20 coded GAS isolates for typing. Conventional phenotypic typing (based on cell surface T and M protein antigens and opacity factor [OF] production) and molecular methods (emm gene typing) were used either as single or combined approaches to GAS typing. T typing was performed by 16 centers; 12 centers found one or more of the 20 strains nontypeable (typeability, 89%), and 11 centers reported at least one incorrect result (concordance, 93%). The 10 centers that tested for OF production achieved 96% concordance. Limited availability of antisera resulted in poor typeability values from the four centers that performed phenotypic M typing (41%), three of which also performed anti-OF typing (typeability, 63%); however, concordance was high for both M (100%) and anti-OF (94%) typing. In contrast, the 15 centers that performed emm gene sequencing achieved excellent typeability (97%) and concordance (98%), although comparison of the performance between centers yielded typeability rates from 65 to 100% and concordance values from 83 to 100%. With the rapid expansion and use of molecular genotypic methods to characterize GAS, continuation of EQA is essential in order to achieve international standardization and comparison of type distributions.</abstract><cop>Washington, DC</cop><pub>American Society for Microbiology</pub><pmid>17267628</pmid><doi>10.1128/JCM.02146-06</doi><tpages>5</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Antigens, Bacterial - analysis Antigens, Bacterial - genetics Bacterial Outer Membrane Proteins - analysis Bacterial Outer Membrane Proteins - genetics Bacterial Typing Techniques - standards Bacteriological Techniques - standards Bacteriology Basic Medicine Biological and medical sciences Carrier Proteins - analysis Carrier Proteins - genetics Europe Fundamental and applied biological sciences. Psychology Genotype Humans Infectious diseases Medical and Health Sciences Medical sciences Medicin och hälsovetenskap Medicinska och farmaceutiska grundvetenskaper Microbiology Microbiology in the medical area Mikrobiologi inom det medicinska området Miscellaneous Peptide Hydrolases - analysis Quality Control Sequence Analysis, DNA Serotyping Streptococcal Infections - microbiology Streptococcus pyogenes Streptococcus pyogenes - classification Streptococcus pyogenes - isolation & purification |
title | International Quality Assurance Study for Characterization of Streptococcus pyogenes |
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